MGE detailed information
MGE type: Genomic_island MGE length: 36863 bp
Accession: NZ_CP104482 Location: 3633110..3669972 Organism: Salmonella enterica strain SalSpp_sample_08_No.4 Replicon: chromosome
Accession: NZ_CP104482 Location: 3633110..3669972 Organism: Salmonella enterica strain SalSpp_sample_08_No.4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4230_RS17895 () | 3628666..3631110 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| N4230_RS17900 () | 3631219..3631986 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| N4230_RS17905 () | 3632357..3632764 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| N4230_RS17910 () | 3633110..3633829 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| N4230_RS17915 () | 3633833..3634048 | - | 216 | WP_031626858.1 | hypothetical protein | - |
| N4230_RS17920 () | 3634168..3635115 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| N4230_RS17925 () | 3635608..3635848 | - | 241 | Protein_3504 | PerC family transcriptional regulator | - |
| N4230_RS17930 () | 3635931..3636752 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| N4230_RS17935 () | 3637160..3637630 | - | 471 | WP_000266946.1 | AfaD family invasin | - |
| N4230_RS17940 () | 3637652..3640162 | - | 2511 | WP_000669623.1 | F1 capsule-anchoring protein | VF |
| N4230_RS17945 () | 3640186..3640923 | - | 738 | WP_001537407.1 | Chaperone protein caf1M | VF |
| N4230_RS17950 () | 3641007..3641501 | - | 495 | WP_093984220.1 | pilus assembly protein | - |
| N4230_RS17955 () | 3642265..3642965 | - | 701 | Protein_3510 | integrase core domain-containing protein | - |
| N4230_RS17960 () | 3643018..3643332 | + | 315 | WP_011233128.1 | SymE family type I addiction module toxin | - |
| N4230_RS17965 () | 3643399..3643677 | - | 279 | WP_077905025.1 | hypothetical protein | - |
| - | 3643960..3644292 | - | 333 | - | - | Antitoxin Detail |
| N4230_RS17970 () | 3644117..3644374 | + | 258 | WP_001749073.1 | SymE family type I addiction module toxin | Toxin Detail |
| N4230_RS17975 () | 3644465..3644842 | - | 378 | WP_000739708.1 | Imm8 family immunity protein | - |
| N4230_RS17980 () | 3645575..3645940 | - | 366 | WP_001231281.1 | hypothetical protein | - |
| N4230_RS17985 () | 3645906..3646853 | - | 948 | Protein_3516 | hypothetical protein | VF |
| N4230_RS17990 () | 3647279..3647413 | + | 135 | Protein_3517 | type I toxin-antitoxin system SymE family toxin | - |
| N4230_RS17995 () | 3647482..3647769 | - | 288 | WP_017442165.1 | hypothetical protein | - |
| N4230_RS18000 () | 3647772..3652457 | - | 4686 | WP_162008459.1 | RHS repeat-associated core domain-containing protein | - |
| N4230_RS18005 () | 3652473..3652931 | - | 459 | WP_000186513.1 | DcrB-related protein | - |
| N4230_RS18010 () | 3652991..3655225 | - | 2235 | WP_080192089.1 | hypothetical protein | VF |
| N4230_RS18015 () | 3655622..3656143 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| N4230_RS18020 () | 3656167..3656583 | - | 417 | WP_000759645.1 | DUF2195 family protein | - |
| N4230_RS18025 () | 3656580..3656675 | - | 96 | Protein_3524 | cytoplasmic protein | - |
| N4230_RS18030 () | 3656711..3657172 | - | 462 | WP_001684272.1 | hypothetical protein | - |
| N4230_RS18035 () | 3657157..3657627 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| N4230_RS18040 () | 3657670..3658437 | - | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| N4230_RS18045 () | 3658437..3662306 | - | 3870 | WP_093984219.1 | hypothetical protein | VF |
| N4230_RS18050 () | 3662340..3662771 | - | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| N4230_RS18055 () | 3662974..3663747 | - | 774 | WP_137975360.1 | Rap1a/Tai family immunity protein | - |
| N4230_RS18060 () | 3663752..3665056 | - | 1305 | WP_080192087.1 | Peptidoglycan-associated lipoprotein | VF |
| N4230_RS18065 () | 3665053..3666396 | - | 1344 | WP_000118740.1 | hypothetical protein | VF |
| N4230_RS18070 () | 3666400..3666936 | - | 537 | WP_079788187.1 | hypothetical protein | VF |
| N4230_RS18075 () | 3667003..3667488 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| N4230_RS18080 () | 3667631..3668014 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| N4230_RS18085 () | 3667999..3668484 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| N4230_RS18090 () | 3668527..3668719 | - | 193 | Protein_3537 | type VI secretion system lipoprotein TssJ | - |
| N4230_RS18095 () | 3668787..3669272 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| N4230_RS18100 () | 3669526..3669858 | - | 333 | WP_014344502.1 | hypothetical protein | - |
| N4230_RS18105 () | 3669985..3670095 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| N4230_RS18110 () | 3670160..3671668 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| N4230_RS18115 () | 3671692..3672234 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|