MGE detailed information
MGE type: Prophage MGE length: 100910 bp
Accession: NZ_CP104482 Location: 1991324..2092233 Organism: Salmonella enterica strain SalSpp_sample_08_No.4 Replicon: chromosome
Accession: NZ_CP104482 Location: 1991324..2092233 Organism: Salmonella enterica strain SalSpp_sample_08_No.4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4230_RS09625 () | 1986801..1987370 | + | 570 | WP_000024796.1 | VOC family protein | - |
| N4230_RS09630 () | 1987390..1988136 | + | 747 | WP_093984214.1 | copper homeostasis protein CutC | - |
| N4230_RS09635 () | 1988372..1989343 | - | 972 | WP_000569035.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| N4230_RS09640 () | 1989340..1990083 | - | 744 | WP_000019615.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| N4230_RS09645 () | 1990124..1990519 | - | 396 | WP_000252975.1 | MAPEG family protein | - |
| N4230_RS09650 () | 1990572..1991345 | - | 774 | WP_260973717.1 | DUF72 domain-containing protein | - |
| N4230_RS09655 () | 1991324..1992637 | - | 1314 | WP_103106792.1 | Putative defective protein IntQ ; Integrase | Integrase |
| N4230_RS09660 () | 1992696..1992932 | - | 237 | WP_006669544.1 | excisionase family protein | - |
| N4230_RS09665 () | 1992971..1993540 | - | 570 | WP_006669542.1 | 3'-5' exonuclease | - |
| N4230_RS09670 () | 1993544..1994365 | - | 822 | Protein_1887 | molecular chaperone DnaJ | - |
| N4230_RS09675 () | 1994370..1994729 | - | 360 | WP_020898896.1 | hypothetical protein | - |
| N4230_RS09680 () | 1994729..1995268 | - | 540 | WP_260973710.1 | hypothetical protein | - |
| N4230_RS09685 () | 1995339..1995878 | - | 540 | WP_046722480.1 | hypothetical protein | - |
| N4230_RS09690 () | 1996015..1996842 | - | 828 | WP_000080410.1 | DUF2303 family protein | - |
| N4230_RS09695 () | 1996900..1997256 | - | 357 | WP_001539742.1 | hypothetical protein | - |
| N4230_RS09700 () | 1997487..1997606 | - | 120 | Protein_1893 | hypothetical protein | - |
| N4230_RS09705 () | 1997804..1998142 | + | 339 | WP_071586821.1 | hypothetical protein | - |
| N4230_RS09710 () | 1998080..1998388 | - | 309 | WP_023262052.1 | hypothetical protein | - |
| N4230_RS09715 () | 1998563..1999237 | - | 675 | WP_001749159.1 | LexA family transcriptional regulator | - |
| N4230_RS09720 () | 1999326..1999526 | + | 201 | WP_001749160.1 | YdaS family helix-turn-helix protein | - |
| N4230_RS09725 () | 1999570..2000124 | + | 555 | WP_023139406.1 | YmfL family putative regulatory protein | - |
| N4230_RS09730 () | 2000288..2000467 | + | 180 | WP_071842796.1 | DUF4222 domain-containing protein | - |
| N4230_RS09735 () | 2000457..2001401 | + | 945 | WP_079810459.1 | helix-turn-helix domain-containing protein | - |
| N4230_RS09740 () | 2001403..2001885 | + | 483 | WP_001669427.1 | PerC family transcriptional regulator | - |
| N4230_RS09745 () | 2001885..2002778 | + | 894 | WP_103106784.1 | phage N-6-adenine-methyltransferase | - |
| N4230_RS09750 () | 2002775..2003164 | + | 390 | WP_103106782.1 | RusA family crossover junction endodeoxyribonuclease | - |
| N4230_RS09755 () | 2003181..2003990 | + | 810 | WP_103106780.1 | KilA-N domain-containing protein | - |
| N4230_RS09760 () | 2003998..2004987 | + | 990 | WP_109141173.1 | DUF968 domain-containing protein | - |
| N4230_RS09765 () | 2005001..2005753 | + | 753 | WP_103106777.1 | antitermination protein | - |
| N4230_RS09770 () | 2005835..2006151 | + | 317 | Protein_1907 | hypothetical protein | - |
| N4230_RS09775 () | 2006432..2006620 | + | 189 | WP_000658039.1 | hypothetical protein | - |
| N4230_RS09780 () | 2006710..2007099 | + | 390 | WP_060629017.1 | phage holin family protein | - |
| N4230_RS09785 () | 2007086..2007367 | + | 282 | WP_000226306.1 | phage holin family protein | - |
| N4230_RS09790 () | 2007367..2007981 | + | 615 | WP_109141174.1 | glycoside hydrolase family 19 protein | - |
| N4230_RS09795 () | 2007978..2008517 | + | 540 | WP_001050802.1 | DUF2514 domain-containing protein | - |
| N4230_RS09800 () | 2008560..2008937 | + | 378 | WP_000495546.1 | hypothetical protein | - |
| N4230_RS09805 () | 2009005..2009349 | + | 345 | WP_023137451.1 | HNH endonuclease signature motif containing protein | - |
| N4230_RS09810 () | 2009482..2009946 | + | 465 | WP_000919034.1 | phage terminase small subunit P27 family | - |
| N4230_RS09815 () | 2009900..2011642 | + | 1743 | WP_260973711.1 | terminase large subunit | - |
| N4230_RS09820 () | 2011642..2012946 | + | 1305 | WP_000002706.1 | phage portal protein | - |
| N4230_RS09825 () | 2012960..2013808 | + | 849 | WP_000039023.1 | Clp protease ClpP | - |
| N4230_RS09830 () | 2013818..2015035 | + | 1218 | WP_010835821.1 | phage major capsid protein | - |
| N4230_RS09835 () | 2015079..2015348 | + | 270 | WP_170915652.1 | hypothetical protein | VF |
| N4230_RS09840 () | 2015348..2015674 | + | 327 | WP_001648719.1 | head-tail connector protein | - |
| N4230_RS09845 () | 2015684..2016022 | + | 339 | WP_020898872.1 | phage head closure protein | - |
| N4230_RS09850 () | 2016019..2016468 | + | 450 | WP_080169609.1 | HK97 gp10 family phage protein | - |
| N4230_RS09855 () | 2016465..2016812 | + | 348 | WP_080169610.1 | DUF3168 domain-containing protein | - |
| N4230_RS09860 () | 2016868..2017572 | + | 705 | WP_103106775.1 | immunoglobulin domain-containing protein | - |
| N4230_RS09865 () | 2017600..2017971 | + | 372 | WP_043856242.1 | phage tail assembly chaperone | - |
| N4230_RS09870 () | 2017983..2018279 | + | 297 | WP_020898868.1 | DUF4035 domain-containing protein | - |
| N4230_RS09875 () | 2018347..2018946 | + | 600 | WP_020898867.1 | hypothetical protein | - |
| N4230_RS09880 () | 2019010..2022300 | + | 3291 | WP_260973712.1 | phage tail tape measure protein | - |
| N4230_RS09885 () | 2022403..2022651 | - | 249 | WP_079973448.1 | hypothetical protein | - |
| N4230_RS09890 () | 2022815..2023408 | + | 594 | WP_000279475.1 | hypothetical protein | - |
| N4230_RS09895 () | 2023408..2023992 | + | 585 | WP_023252582.1 | hypothetical protein | - |
| N4230_RS09900 () | 2023999..2024397 | + | 399 | WP_010835815.1 | hypothetical protein | - |
| N4230_RS09905 () | 2024397..2027117 | + | 2721 | WP_260973713.1 | DUF1983 domain-containing protein | - |
| N4230_RS09910 () | 2027126..2028085 | + | 960 | WP_260973714.1 | DUF6453 family protein | - |
| N4230_RS09915 () | 2028096..2029394 | + | 1299 | WP_260973715.1 | phage tail protein | - |
| N4230_RS09920 () | 2029631..2030050 | + | 420 | WP_023230753.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N4230_RS09925 () | 2030053..2031321 | + | 1269 | WP_053530330.1 | Y-family DNA polymerase | - |
| N4230_RS09930 () | 2031314..2031985 | - | 672 | WP_103107248.1 | SOS response-associated peptidase | - |
| N4230_RS09935 () | 2032216..2032311 | - | 96 | Protein_1940 | hypothetical protein | - |
| N4230_RS09940 () | 2032308..2032874 | - | 567 | WP_000916144.1 | hydrolase | - |
| N4230_RS09945 () | 2033199..2034971 | + | 1773 | WP_001258629.1 | aspartate--tRNA ligase | - |
| N4230_RS09950 () | 2035074..2035526 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| N4230_RS09955 () | 2035556..2036296 | + | 741 | WP_000907242.1 | putative transcriptional regulatory protein YebC | VF |
| N4230_RS09960 () | 2036333..2036854 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| N4230_RS09965 () | 2036856..2037455 | - | 600 | WP_000716753.1 | YebB family permuted papain-like enzyme | - |
| N4230_RS09970 () | 2038082..2038978 | - | 897 | WP_001659582.1 | DUF4034 domain-containing protein | - |
| N4230_RS09975 () | 2039398..2040009 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| N4230_RS09980 () | 2040018..2041028 | + | 1011 | WP_000568504.1 | Holliday junction branch migration DNA helicase RuvB | - |
| N4230_RS09985 () | 2041107..2041892 | - | 786 | WP_000571508.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| N4230_RS09990 () | 2041889..2042644 | - | 756 | WP_000203023.1 | Zinc import ATP-binding protein ZnuC | VF |
| N4230_RS09995 () | 2042723..2043667 | + | 945 | WP_137975357.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| N4230_RS10000 () | 2043683..2045002 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| N4230_RS10005 () | 2045119..2046090 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| N4230_RS10010 () | 2046163..2047605 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| N4230_RS10015 () | 2047729..2048598 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| N4230_RS10020 () | 2048940..2050415 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| N4230_RS10025 () | 2050650..2052461 | + | 1812 | WP_001069118.1 | phosphogluconate dehydratase | - |
| N4230_RS10030 () | 2052499..2053140 | + | 642 | WP_080192154.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| N4230_RS10035 () | 2053240..2054418 | - | 1179 | WP_080192155.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| N4230_RS10040 () | 2054549..2054839 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| N4230_RS10045 () | 2054907..2055260 | + | 354 | WP_001042123.1 | protein YebF | - |
| N4230_RS10050 () | 2055354..2056013 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| N4230_RS10055 () | 2056226..2058277 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| N4230_RS10060 () | 2058314..2059012 | - | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| N4230_RS10065 () | 2059036..2059692 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| N4230_RS10070 () | 2059800..2060030 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| N4230_RS10075 () | 2060168..2060542 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| N4230_RS10080 () | 2060543..2061418 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| N4230_RS10085 () | 2061435..2061788 | + | 354 | WP_000722370.1 | YebY family protein | - |
| - | 2061889..2062035 | - | 147 | - | - | Antitoxin Detail |
| - | 2061927..2062030 | + | 104 | - | - | Toxin Detail |
| N4230_RS10090 () | 2062151..2063073 | - | 923 | Protein_1971 | hypothetical protein ; Integrase | Integrase |
| N4230_RS10095 () | 2063337..2063798 | - | 462 | Protein_1972 | DNA breaking-rejoining protein | - |
| N4230_RS10100 () | 2063787..2063978 | + | 192 | Protein_1973 | glycoside hydrolase family 19 protein | - |
| N4230_RS10105 () | 2064032..2064565 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| N4230_RS10110 () | 2064822..2064989 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| N4230_RS10115 () | 2065296..2065556 | + | 261 | Protein_1976 | DUF1441 family protein | - |
| N4230_RS10120 () | 2065558..2065773 | + | 216 | Protein_1977 | shikimate transporter | - |
| N4230_RS10125 () | 2065783..2066070 | + | 288 | Protein_1978 | macro domain-containing protein | - |
| N4230_RS10130 () | 2066083..2066594 | + | 512 | Protein_1979 | tail fiber assembly protein | - |
| N4230_RS10135 () | 2066691..2066891 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| N4230_RS10140 () | 2067281..2067461 | - | 181 | Protein_1981 | IS3 family transposase | - |
| N4230_RS10145 () | 2067452..2067553 | + | 102 | Protein_1982 | arsenic transporter | - |
| N4230_RS10150 () | 2068175..2068407 | + | 233 | Protein_1983 | helix-turn-helix domain-containing protein | - |
| N4230_RS10155 () | 2068734..2069348 | - | 615 | WP_080192157.1 | disulfide bond formation protein B | - |
| N4230_RS10160 () | 2069358..2069516 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| N4230_RS10165 () | 2069649..2070563 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| N4230_RS10170 () | 2071647..2072069 | - | 423 | Protein_1987 | tyrosine-type recombinase/integrase | - |
| N4230_RS10175 () | 2072139..2073347 | + | 1209 | Protein_1988 | IS256 family transposase ISEc39 | Transposase |
| N4230_RS10180 () | 2073493..2073633 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| N4230_RS10185 () | 2073799..2074044 | - | 246 | WP_093984212.1 | hypothetical protein | - |
| N4230_RS10190 () | 2073939..2074361 | - | 423 | WP_227490754.1 | DUF1398 family protein | - |
| N4230_RS10195 () | 2075046..2075768 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| N4230_RS10200 () | 2076053..2076217 | + | 165 | WP_001134856.1 | membrane protein | - |
| N4230_RS10205 () | 2076441..2077091 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| N4230_RS10210 () | 2077110..2077301 | - | 192 | WP_000457836.1 | YebW family protein | - |
| N4230_RS10215 () | 2077412..2077648 | - | 237 | WP_024131167.1 | YebV family protein | - |
| N4230_RS10220 () | 2077766..2079205 | - | 1440 | WP_080192163.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| N4230_RS10225 () | 2079283..2081916 | - | 2634 | WP_001521100.1 | Intermembrane transport protein YebT | VF |
| N4230_RS10230 () | 2081885..2083168 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| N4230_RS10235 () | 2083297..2083794 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| N4230_RS10240 () | 2083892..2084578 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| N4230_RS10245 () | 2084598..2086646 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| N4230_RS10250 () | 2086840..2087721 | + | 882 | WP_000984498.1 | protease HtpX | - |
| N4230_RS10255 () | 2087769..2089142 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| N4230_RS10260 () | 2089318..2090109 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| N4230_RS10265 () | 2090321..2090560 | - | 240 | WP_080192158.1 | invasion protein YobH | - |
| N4230_RS10270 () | 2090718..2090861 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| N4230_RS10275 () | 2090932..2091219 | + | 288 | WP_001000660.1 | YebO family protein | - |
| N4230_RS10280 () | 2091868..2092011 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| N4230_RS10285 () | 2092024..2092233 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| N4230_RS10290 () | 2092453..2094198 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| N4230_RS10295 () | 2094264..2095073 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| N4230_RS10300 () | 2095070..2095636 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| N4230_RS10305 () | 2096046..2096504 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|