MGE detailed information
MGE type: Prophage MGE length: 51552 bp
Accession: NZ_CP104442 Location: 2257455..2309006 Organism: Escherichia coli strain HBUT-L Replicon: chromosome
Accession: NZ_CP104442 Location: 2257455..2309006 Organism: Escherichia coli strain HBUT-L Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N1H43_RS10915 (2256013) | 2256013..2257221 | - | 1209 | WP_001339197.1 | IS4-like element ISVsa5 family transposase | - |
| N1H43_RS10920 (2257320) | 2257320..2257793 | + | 474 | WP_077631333.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| N1H43_RS10925 (2257891) | 2257891..2258466 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| N1H43_RS10930 (2258466) | 2258466..2261540 | - | 3075 | WP_000279140.1 | phage tail protein | - |
| N1H43_RS10935 (2261605) | 2261605..2262204 | - | 600 | WP_001233072.1 | hypothetical protein | VF |
| N1H43_RS10940 (2262275) | 2262275..2265688 | - | 3414 | WP_000033679.1 | host specificity protein J | - |
| N1H43_RS10945 (2265749) | 2265749..2266321 | - | 573 | WP_000847666.1 | tail assembly protein | - |
| N1H43_RS10950 (2266318) | 2266318..2267061 | - | 744 | WP_001349921.1 | C40 family peptidase | - |
| N1H43_RS10955 (2267067) | 2267067..2267765 | - | 699 | WP_001152622.1 | phage minor tail protein L | - |
| N1H43_RS10960 (2267765) | 2267765..2268094 | - | 330 | WP_000847360.1 | phage tail protein | - |
| N1H43_RS10965 (2268091) | 2268091..2270652 | - | 2562 | WP_000840335.1 | phage tail tape measure protein | - |
| N1H43_RS10970 (2270645) | 2270645..2271079 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| N1H43_RS10975 (2271061) | 2271061..2271483 | - | 423 | WP_000479150.1 | phage minor tail protein G | - |
| N1H43_RS10980 (2271499) | 2271499..2272239 | - | 741 | WP_001349920.1 | phage tail protein | - |
| N1H43_RS10985 (2272247) | 2272247..2272642 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| N1H43_RS10990 (2272639) | 2272639..2273217 | - | 579 | WP_000985119.1 | phage tail protein | - |
| N1H43_RS10995 (2273229) | 2273229..2273582 | - | 354 | WP_000753007.1 | head-tail joining protein | - |
| N1H43_RS11000 (2273594) | 2273594..2273992 | - | 399 | WP_000158921.1 | DNA-packaging protein FI | - |
| N1H43_RS11005 (2274034) | 2274034..2275059 | - | 1026 | WP_000063280.1 | major capsid protein | - |
| N1H43_RS11010 (2275115) | 2275115..2275447 | - | 333 | WP_001295978.1 | head decoration protein | - |
| N1H43_RS11015 (2275457) | 2275457..2276776 | - | 1320 | WP_000123305.1 | S49 family peptidase | - |
| N1H43_RS11020 (2276757) | 2276757..2278358 | - | 1602 | WP_001349919.1 | phage portal protein | - |
| N1H43_RS11025 (2278355) | 2278355..2278561 | - | 207 | WP_000198149.1 | gpW family protein | - |
| N1H43_RS11030 (2278558) | 2278558..2280483 | - | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| N1H43_RS11035 (2280458) | 2280458..2281003 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| N1H43_RS11040 (2281392) | 2281392..2281625 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| N1H43_RS11045 (2281683) | 2281683..2282093 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| N1H43_RS11050 (2282245) | 2282245..2282418 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| N1H43_RS11055 (2282590) | 2282590..2282745 | - | 156 | WP_001309517.1 | protein YnfN | - |
| N1H43_RS11060 (2282825) | 2282825..2282890 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| N1H43_RS11065 (2282893) | 2282893..2283081 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| N1H43_RS11070 (2283092) | 2283092..2283304 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| N1H43_RS11075 (2283667) | 2283667..2284164 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| N1H43_RS11080 (2284161) | 2284161..2284694 | - | 534 | WP_001092971.1 | lysozyme | - |
| N1H43_RS11085 (2284691) | 2284691..2285002 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| N1H43_RS11090 (2285007) | 2285007..2285222 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| N1H43_RS11095 (2285442) | 2285442..2285612 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| N1H43_RS11100 (2285976) | 2285976..2286191 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| N1H43_RS11105 (2286492) | 2286492..2286704 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| N1H43_RS11110 (2286759) | 2286759..2286848 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| N1H43_RS11115 (2287126) | 2287126..2287878 | - | 753 | WP_001047135.1 | antitermination protein | - |
| N1H43_RS11120 (2287892) | 2287892..2288941 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| N1H43_RS11125 (2288943) | 2288943..2289221 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| N1H43_RS11130 (2289288) | 2289288..2289539 | - | 252 | WP_000980994.1 | protein Rem | - |
| N1H43_RS11135 (2289756) | 2289756..2289911 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| N1H43_RS11140 (2289983) | 2289983..2290270 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| N1H43_RS11145 (2290270) | 2290270..2290509 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| N1H43_RS11150 (2290534) | 2290534..2290839 | + | 306 | WP_001326990.1 | protein YdfV | - |
| N1H43_RS11155 (2291042) | 2291042..2291374 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| N1H43_RS11160 (2291811) | 2291811..2291960 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| N1H43_RS11165 (2292081) | 2292081..2293103 | - | 1023 | Protein_2175 | ISNCY family transposase ISCARN112 | Transposase |
| N1H43_RS11170 (2293893) | 2293893..2294180 | - | 288 | Protein_2176 | hypothetical protein | - |
| N1H43_RS11175 (2294658) | 2294658..2295147 | - | 490 | Protein_2177 | class I SAM-dependent methyltransferase | - |
| N1H43_RS11180 (2295144) | 2295144..2295566 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| N1H43_RS11185 (2295607) | 2295607..2296572 | - | 966 | WP_000054512.1 | hypothetical protein | - |
| N1H43_RS11190 (2296553) | 2296553..2297074 | - | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| N1H43_RS11195 (2297058) | 2297058..2297288 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| N1H43_RS11200 (2297372) | 2297372..2297779 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| N1H43_RS11205 (2297946) | 2297946..2298101 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| N1H43_RS11210 (2298103) | 2298103..2298231 | + | 129 | WP_000344964.1 | protein YdfB | - |
| N1H43_RS11215 (2298261) | 2298261..2298479 | + | 219 | WP_001171942.1 | protein YdfC | - |
| N1H43_RS11220 (2299047) | 2299047..2299235 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| N1H43_RS11225 (2299232) | 2299232..2299423 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| N1H43_RS11230 (2299516) | 2299516..2301993 | + | 2478 | WP_000048348.1 | exonuclease | - |
| N1H43_RS11235 (2302066) | 2302066..2302317 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| N1H43_RS11240 (2302352) | 2302352..2303632 | + | 1281 | WP_000876956.1 | hypothetical protein ; Integrase | Integrase |
| N1H43_RS11245 (2303802) | 2303802..2305010 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| N1H43_RS11250 (2305158) | 2305158..2306177 | - | 1020 | WP_000836076.1 | Zn-dependent oxidoreductase | - |
| N1H43_RS11255 (2306189) | 2306189..2307403 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| N1H43_RS11260 (2307609) | 2307609..2307935 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| N1H43_RS11265 (2308070) | 2308070..2308411 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| N1H43_RS11270 (2308446) | 2308446..2309006 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| N1H43_RS11275 (2309009) | 2309009..2309719 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| N1H43_RS11280 (2309827) | 2309827..2310132 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| N1H43_RS11285 (2310331) | 2310331..2312757 | + | 2427 | WP_000041685.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|