MGE detailed information
MGE type: Prophage MGE length: 60385 bp
Accession: NZ_CP104442 Location: 2072170..2132554 Organism: Escherichia coli strain HBUT-L Replicon: chromosome
Accession: NZ_CP104442 Location: 2072170..2132554 Organism: Escherichia coli strain HBUT-L Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N1H43_RS09985 (2067725) | 2067725..2067982 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| N1H43_RS09990 (2068032) | 2068032..2068982 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| N1H43_RS09995 (2069134) | 2069134..2069886 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| N1H43_RS10000 (2070081) | 2070081..2070596 | - | 516 | WP_000945005.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| N1H43_RS10005 (2070607) | 2070607..2072133 | - | 1527 | WP_000062967.1 | p-aminobenzoyl-glutamate transporter | - |
| N1H43_RS10010 (2072170) | 2072170..2073615 | - | 1446 | WP_001156446.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| N1H43_RS10015 (2073615) | 2073615..2074925 | - | 1311 | WP_000444949.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| N1H43_RS10020 (2075101) | 2075101..2076009 | + | 909 | WP_000885467.1 | LysR family transcriptional regulator | - |
| N1H43_RS10025 (2076339) | 2076339..2076902 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| N1H43_RS10030 (2076923) | 2076923..2078155 | - | 1233 | WP_001307164.1 | diguanylate cyclase DgcM | - |
| N1H43_RS10035 (2078349) | 2078349..2078396 | + | 48 | WP_211180494.1 | protein YnaN | - |
| N1H43_RS10040 (2078410) | 2078410..2079393 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| N1H43_RS10045 (2079871) | 2079871..2081244 | + | 1374 | WP_000123740.1 | ATP-dependent RNA helicase DbpA | - |
| N1H43_RS10050 (2081373) | 2081373..2082308 | - | 936 | WP_001157422.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| N1H43_RS10055 (2082360) | 2082360..2083595 | - | 1236 | WP_000040852.1 | Flagellar basal-body rod protein FlgC ; Integrase | Integrase |
| N1H43_RS10060 (2083597) | 2083597..2083812 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (2083916) | 2083916..2084094 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2083916) | 2083916..2084094 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2083916) | 2083916..2084094 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2083916) | 2083916..2084094 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| N1H43_RS10065 (2083891) | 2083891..2084100 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| N1H43_RS10070 (2084093) | 2084093..2084287 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| N1H43_RS10075 (2084344) | 2084344..2085153 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| N1H43_RS10080 (2085146) | 2085146..2087746 | - | 2601 | WP_000105152.1 | exodeoxyribonuclease VIII | - |
| N1H43_RS10085 (2087848) | 2087848..2088123 | - | 276 | WP_001349884.1 | hypothetical protein | - |
| N1H43_RS10090 (2088198) | 2088198..2088368 | - | 171 | WP_001349883.1 | YdaE family protein | - |
| N1H43_RS10095 (2088368) | 2088368..2088589 | - | 222 | WP_000560220.1 | killing protein KilR | - |
| N1H43_RS10100 (2088745) | 2088745..2089953 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| N1H43_RS10105 (2090348) | 2090348..2090500 | - | 153 | WP_001169153.1 | DUF1391 family protein | - |
| N1H43_RS10110 (2090511) | 2090511..2090645 | - | 135 | WP_000233813.1 | hypothetical protein | - |
| N1H43_RS10115 (2090931) | 2090931..2091350 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| N1H43_RS10120 (2091430) | 2091430..2091684 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| N1H43_RS10125 (2091681) | 2091681..2092103 | + | 423 | WP_000693802.1 | toxin YdaT family protein | - |
| N1H43_RS10130 (2092116) | 2092116..2092973 | + | 858 | WP_000899746.1 | YdaU family protein | - |
| N1H43_RS10135 (2092980) | 2092980..2093726 | + | 747 | WP_000788973.1 | ATP-binding protein | - |
| N1H43_RS10140 (2093749) | 2093749..2094510 | + | 762 | WP_000450660.1 | DUF1627 domain-containing protein | - |
| N1H43_RS10145 (2094526) | 2094526..2094948 | + | 423 | WP_001151237.1 | DUF977 family protein | - |
| N1H43_RS10150 (2095132) | 2095132..2096259 | + | 1128 | WP_000228824.1 | DUF262 domain-containing protein | - |
| N1H43_RS10155 (2096252) | 2096252..2097361 | + | 1110 | WP_000569066.1 | DUF3696 domain-containing protein | - |
| N1H43_RS10160 (2097358) | 2097358..2098335 | + | 978 | WP_000064766.1 | hypothetical protein | - |
| N1H43_RS10165 (2098966) | 2098966..2099121 | + | 156 | WP_000813259.1 | Hok/Gef family protein | - |
| N1H43_RS10170 (2099590) | 2099590..2100189 | + | 600 | WP_000940320.1 | DUF1367 family protein | - |
| N1H43_RS10175 (2100189) | 2100189..2100479 | + | 291 | WP_000228041.1 | DUF1364 domain-containing protein | - |
| N1H43_RS10180 (2100476) | 2100476..2101012 | + | 537 | WP_000640164.1 | DUF1133 family protein | - |
| N1H43_RS10195 (2102283) | 2102283..2102675 | + | 393 | WP_001349882.1 | putative holin | - |
| N1H43_RS10200 (2102665) | 2102665..2102940 | + | 276 | WP_000950573.1 | phage holin family protein | - |
| N1H43_RS10205 (2102943) | 2102943..2103320 | + | 378 | WP_000014545.1 | M15 family metallopeptidase | - |
| N1H43_RS10210 (2103335) | 2103335..2103517 | + | 183 | WP_133301706.1 | hypothetical protein | - |
| N1H43_RS10215 (2103922) | 2103922..2104179 | + | 258 | Protein_1985 | ParB/Srx family N-terminal domain-containing protein | - |
| N1H43_RS10220 (2104703) | 2104703..2105635 | + | 933 | WP_001204039.1 | hypothetical protein | - |
| N1H43_RS10225 (2105613) | 2105613..2105822 | + | 210 | WP_000126790.1 | hypothetical protein | - |
| N1H43_RS10230 (2105826) | 2105826..2106917 | + | 1092 | WP_000089432.1 | terminase small subunit | - |
| N1H43_RS10235 (2106907) | 2106907..2108235 | + | 1329 | WP_000021163.1 | terminase | - |
| N1H43_RS10240 (2108254) | 2108254..2109690 | + | 1437 | WP_000807710.1 | DUF1073 domain-containing protein | - |
| N1H43_RS10245 (2109635) | 2109635..2110468 | + | 834 | WP_001018386.1 | hypothetical protein | - |
| N1H43_RS10250 (2110449) | 2110449..2111771 | + | 1323 | WP_000059667.1 | DUF2213 domain-containing protein | - |
| N1H43_RS10255 (2111764) | 2111764..2112381 | + | 618 | WP_001349881.1 | hypothetical protein | - |
| N1H43_RS10260 (2112396) | 2112396..2113424 | + | 1029 | WP_001272365.1 | hypothetical protein | - |
| N1H43_RS10265 (2113482) | 2113482..2113952 | + | 471 | WP_000780861.1 | hypothetical protein | - |
| N1H43_RS10270 (2113952) | 2113952..2114392 | + | 441 | WP_000175376.1 | hypothetical protein | - |
| N1H43_RS10275 (2114389) | 2114389..2114829 | + | 441 | WP_000762302.1 | hypothetical protein | - |
| N1H43_RS10280 (2114816) | 2114816..2115760 | + | 945 | WP_001139506.1 | hypothetical protein | - |
| N1H43_RS10285 (2115760) | 2115760..2117097 | + | 1338 | WP_000506600.1 | hypothetical protein | - |
| N1H43_RS10290 (2117121) | 2117121..2117552 | + | 432 | WP_000613371.1 | hypothetical protein | - |
| N1H43_RS10295 (2117549) | 2117549..2118166 | + | 618 | WP_000703979.1 | hypothetical protein | - |
| N1H43_RS10300 (2118230) | 2118230..2120218 | + | 1989 | WP_000016439.1 | transglycosylase SLT domain-containing protein | - |
| N1H43_RS10305 (2120222) | 2120222..2120890 | + | 669 | WP_000056323.1 | hypothetical protein | - |
| N1H43_RS10310 (2120887) | 2120887..2121153 | + | 267 | WP_000209259.1 | hypothetical protein | - |
| N1H43_RS10315 (2121153) | 2121153..2122160 | + | 1008 | WP_001271172.1 | hypothetical protein | - |
| N1H43_RS10320 (2122160) | 2122160..2122873 | + | 714 | WP_000063616.1 | phage baseplate protein | - |
| N1H43_RS10325 (2123570) | 2123570..2123917 | + | 348 | WP_001261334.1 | hypothetical protein | - |
| N1H43_RS10330 (2123893) | 2123893..2124285 | - | 393 | WP_077626365.1 | antA/AntB antirepressor family protein | - |
| N1H43_RS10335 (2124308) | 2124308..2124847 | - | 540 | WP_000733802.1 | hypothetical protein | - |
| N1H43_RS10340 (2124869) | 2124869..2126095 | + | 1227 | WP_001349878.1 | baseplate J/gp47 family protein | - |
| N1H43_RS10345 (2126079) | 2126079..2126705 | + | 627 | WP_001199732.1 | hypothetical protein | - |
| N1H43_RS10350 (2126702) | 2126702..2128255 | + | 1554 | WP_000600270.1 | hypothetical protein | - |
| N1H43_RS10355 (2128258) | 2128258..2128803 | + | 546 | WP_000902859.1 | tail fiber assembly protein | - |
| N1H43_RS10360 (2128827) | 2128827..2131967 | + | 3141 | WP_000117760.1 | prophage tail fiber N-terminal domain-containing protein | - |
| N1H43_RS10365 (2131982) | 2131982..2132554 | + | 573 | WP_000701877.1 | DUF4376 domain-containing protein | - |
| N1H43_RS10370 (2133094) | 2133094..2133528 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| N1H43_RS10375 (2133669) | 2133669..2134802 | - | 1134 | WP_000837909.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|