MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 79977 bp
Accession: NZ_CP104394 Location: 1..79977 Organism: Enterococcus raffinosus strain HG-5 Replicon: plasmid pHG52
Accession: NZ_CP104394 Location: 1..79977 Organism: Enterococcus raffinosus strain HG-5 Replicon: plasmid pHG52
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4S13_RS21345 (N4S13_21345) | 178..1644 | - | 1467 | WP_118368329.1 | HAMP domain-containing sensor histidine kinase | - |
| N4S13_RS21350 (N4S13_21350) | 2084..2191 | + | 108 | WP_112132923.1 | type I toxin-antitoxin system Fst family toxin | - |
| N4S13_RS21355 (N4S13_21355) | 2458..3048 | - | 591 | WP_118368328.1 | Tn3 family transposase TnBth3 | Transposase |
| N4S13_RS21360 (N4S13_21360) | 3427..3723 | - | 297 | WP_260711790.1 | hypothetical protein | - |
| N4S13_RS21365 (N4S13_21365) | 3639..4304 | + | 666 | WP_260711764.1 | DUF2142 domain-containing protein | - |
| N4S13_RS21370 (N4S13_21370) | 5108..5194 | + | 87 | WP_127446299.1 | type I toxin-antitoxin system Fst family toxin | - |
| N4S13_RS21375 (N4S13_21375) | 5304..5438 | - | 135 | WP_002302374.1 | hypothetical protein | - |
| N4S13_RS21380 (N4S13_21380) | 5836..5937 | - | 102 | Protein_8 | IS91 family transposase ISVa3 | Transposase |
| N4S13_RS21385 (N4S13_21385) | 6064..6744 | + | 681 | WP_002319817.1 | IS6 family transposase IS1297 | Transposase |
| N4S13_RS21390 (N4S13_21390) | 6750..7055 | + | 306 | WP_260711765.1 | hypothetical protein | - |
| N4S13_RS21395 (N4S13_21395) | 7072..8181 | - | 1110 | WP_010741907.1 | ATP-binding protein | - |
| N4S13_RS21400 (N4S13_21400) | 8369..8743 | + | 375 | WP_260711766.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| N4S13_RS21405 (N4S13_21405) | 8744..10501 | + | 1758 | WP_260711767.1 | BlaR1 family beta-lactam sensor/signal transducer | - |
| N4S13_RS21410 (N4S13_21410) | 10563..12575 | + | 2013 | WP_260711768.1 | penicillin-binding transpeptidase domain-containing protein | - |
| N4S13_RS21415 (N4S13_21415) | 12787..13461 | + | 675 | WP_071858865.1 | IS6 family transposase IS1297 | Transposase |
| N4S13_RS21420 (N4S13_21420) | 13778..13873 | - | 96 | WP_112132927.1 | type I toxin-antitoxin system Fst family toxin | - |
| N4S13_RS21425 (N4S13_21425) | 14112..14258 | + | 147 | WP_181990602.1 | hypothetical protein | - |
| N4S13_RS21430 (N4S13_21430) | 14530..14826 | + | 297 | WP_118368320.1 | hypothetical protein | - |
| N4S13_RS21435 (N4S13_21435) | 14878..15270 | + | 393 | WP_112132926.1 | hypothetical protein | - |
| N4S13_RS21440 (N4S13_21440) | 15660..16199 | + | 540 | WP_112132925.1 | helix-turn-helix transcriptional regulator | - |
| N4S13_RS21445 (N4S13_21445) | 16344..17654 | + | 1311 | WP_260711769.1 | radical SAM protein | - |
| N4S13_RS21450 (N4S13_21450) | 17678..18358 | + | 681 | WP_005875647.1 | IS6 family transposase ISEnfa1 | Transposase |
| N4S13_RS21455 (N4S13_21455) | 18513..18830 | - | 318 | WP_070503213.1 | hypothetical protein | - |
| N4S13_RS21460 (N4S13_21460) | 18837..19112 | - | 276 | WP_070503211.1 | hypothetical protein | - |
| N4S13_RS21465 (N4S13_21465) | 19736..20329 | + | 594 | WP_070503209.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| N4S13_RS21470 (N4S13_21470) | 20342..21697 | + | 1356 | WP_118368257.1 | DUF6056 family protein | - |
| N4S13_RS21475 (N4S13_21475) | 22155..22370 | + | 216 | WP_070503203.1 | hypothetical protein | - |
| N4S13_RS21480 (N4S13_21480) | 22614..22937 | - | 324 | WP_070503201.1 | hypothetical protein | - |
| N4S13_RS21485 (N4S13_21485) | 22948..23949 | - | 1002 | WP_070503199.1 | AAA family ATPase | - |
| N4S13_RS21490 (N4S13_21490) | 24422..25462 | + | 1041 | WP_070503196.1 | replication initiator protein A | - |
| N4S13_RS21495 (N4S13_21495) | 25541..26266 | + | 726 | WP_070503194.1 | hypothetical protein | - |
| N4S13_RS21500 (N4S13_21500) | 27390..27731 | + | 342 | WP_070504146.1 | type IV conjugative transfer system protein TraE | - |
| N4S13_RS21505 (N4S13_21505) | 28423..28629 | + | 207 | WP_137438795.1 | hypothetical protein | - |
| N4S13_RS21510 (N4S13_21510) | 28671..28844 | + | 174 | WP_185939400.1 | hypothetical protein | - |
| N4S13_RS21515 (N4S13_21515) | 29179..29439 | + | 261 | WP_070621550.1 | toxin-antitoxin system, antitoxin component, AbrB family protein | Antitoxin Detail |
| N4S13_RS21520 (N4S13_21520) | 29439..29780 | + | 342 | WP_244299263.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| N4S13_RS21525 (N4S13_21525) | 29800..31152 | + | 1353 | WP_070503788.1 | C39 family peptidase | - |
| N4S13_RS21530 (N4S13_21530) | 31176..31901 | + | 726 | WP_070503791.1 | hypothetical protein | - |
| N4S13_RS21535 (N4S13_21535) | 32077..35304 | + | 3228 | WP_070503595.1 | VaFE repeat-containing surface-anchored protein | - |
| N4S13_RS21540 (N4S13_21540) | 35501..36751 | - | 1251 | WP_016178086.1 | IS110 family transposase ISSpn10 | Transposase |
| N4S13_RS21545 (N4S13_21545) | 37157..38116 | + | 960 | WP_070503593.1 | class A sortase | - |
| N4S13_RS21550 (N4S13_21550) | 38135..38500 | + | 366 | WP_118368262.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| N4S13_RS21555 (N4S13_21555) | 39011..39094 | + | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| N4S13_RS21560 (N4S13_21560) | 39219..39956 | + | 738 | WP_001038792.1 | rRNA adenine N-6-methyltransferase | ARG |
| N4S13_RS21565 (N4S13_21565) | 40311..40865 | + | 555 | WP_000576156.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| N4S13_RS21570 (N4S13_21570) | 40869..43787 | + | 2919 | WP_001240982.1 | Tn3 family transposase Tn4430 | Transposase |
| N4S13_RS21575 (N4S13_21575) | 43836..45176 | + | 1341 | WP_260711788.1 | hypothetical protein | VF |
| N4S13_RS21580 (N4S13_21580) | 45304..45399 | - | 96 | WP_118368263.1 | type I toxin-antitoxin system Fst family toxin | - |
| N4S13_RS21585 (N4S13_21585) | 45527..45664 | + | 138 | WP_158408713.1 | hypothetical protein | - |
| N4S13_RS21590 (N4S13_21590) | 45684..46076 | + | 393 | WP_070503228.1 | hypothetical protein | - |
| N4S13_RS21595 (N4S13_21595) | 46081..46233 | + | 153 | WP_158408712.1 | hypothetical protein | - |
| N4S13_RS21600 (N4S13_21600) | 46279..47394 | + | 1116 | WP_070503230.1 | PcfB family protein | - |
| N4S13_RS21605 (N4S13_21605) | 47391..49268 | + | 1878 | WP_118368264.1 | type IV secretory system conjugative DNA transfer family protein | - |
| N4S13_RS21610 (N4S13_21610) | 49271..49474 | + | 204 | WP_070503427.1 | hypothetical protein | - |
| N4S13_RS21615 (N4S13_21615) | 49494..50342 | + | 849 | WP_070503425.1 | hypothetical protein | - |
| N4S13_RS21620 (N4S13_21620) | 50355..50618 | + | 264 | WP_070503423.1 | hypothetical protein | - |
| N4S13_RS21625 (N4S13_21625) | 50650..51006 | + | 357 | WP_244299276.1 | PrgI family protein | - |
| N4S13_RS21630 (N4S13_21630) | 51041..53413 | + | 2373 | WP_167494420.1 | ATP-binding protein | - |
| N4S13_RS21635 (N4S13_21635) | 53413..55233 | + | 1821 | WP_118368265.1 | phage tail tip lysozyme | - |
| N4S13_RS21640 (N4S13_21640) | 55256..55879 | + | 624 | WP_083291863.1 | LapA family protein | - |
| N4S13_RS21645 (N4S13_21645) | 56242..56460 | + | 219 | WP_070505060.1 | hypothetical protein | - |
| N4S13_RS21650 (N4S13_21650) | 56545..56907 | + | 363 | WP_070505061.1 | hypothetical protein | - |
| N4S13_RS21655 (N4S13_21655) | 56999..58099 | + | 1101 | WP_083291865.1 | hypothetical protein | - |
| N4S13_RS21660 (N4S13_21660) | 58086..59465 | + | 1380 | WP_137438794.1 | hypothetical protein | - |
| N4S13_RS21665 (N4S13_21665) | 59475..59801 | + | 327 | WP_260711761.1 | ArdC family protein | - |
| N4S13_RS21670 (N4S13_21670) | 59873..61035 | + | 1163 | WP_102865879.1 | IS3 family transposase ISEfa8 | Transposase |
| N4S13_RS21675 (N4S13_21675) | 61036..61815 | + | 780 | WP_260711762.1 | hypothetical protein | - |
| N4S13_RS21680 (N4S13_21680) | 61841..62104 | + | 264 | WP_070503757.1 | hypothetical protein | - |
| N4S13_RS21685 (N4S13_21685) | 62362..62784 | + | 423 | WP_214280697.1 | hypothetical protein | Relaxase |
| N4S13_RS21690 (N4S13_21690) | 62784..65033 | + | 2250 | WP_070503759.1 | hypothetical protein | Relaxase |
| N4S13_RS21695 (N4S13_21695) | 65055..65534 | + | 480 | WP_070503760.1 | hypothetical protein | - |
| N4S13_RS21700 (N4S13_21700) | 65709..66068 | + | 360 | WP_070503764.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N4S13_RS21705 (N4S13_21705) | 66065..66340 | + | 276 | WP_070503766.1 | helix-turn-helix transcriptional regulator | - |
| N4S13_RS21710 (N4S13_21710) | 66407..66793 | + | 387 | WP_118368267.1 | DUF6075 family protein | - |
| N4S13_RS21715 (N4S13_21715) | 67096..67461 | - | 366 | WP_214280695.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| N4S13_RS21720 (N4S13_21720) | 67599..68330 | - | 732 | WP_070503605.1 | IS21 family transposase ISCth9 | Transposase |
| N4S13_RS21725 (N4S13_21725) | 68327..69793 | - | 1467 | WP_260711763.1 | IS21 family transposase ISSau9 | Transposase |
| N4S13_RS21730 (N4S13_21730) | 69921..71078 | + | 1158 | WP_112132922.1 | IS21 family transposase IS712 | Transposase |
| N4S13_RS21735 (N4S13_21735) | 71089..71847 | + | 759 | WP_048722676.1 | IS21 family transposase IS712 | Transposase |
| N4S13_RS21740 (N4S13_21740) | 71865..72620 | - | 756 | Protein_80 | transposase | - |
| N4S13_RS21745 (N4S13_21745) | 72893..75610 | + | 2718 | WP_112132921.1 | sigma 54-interacting transcriptional regulator | - |
| N4S13_RS21750 (N4S13_21750) | 75628..76044 | + | 417 | WP_070503663.1 | hypothetical protein | - |
| N4S13_RS21755 (N4S13_21755) | 76057..76527 | + | 471 | WP_070503660.1 | PTS sugar transporter subunit IIB | - |
| N4S13_RS21760 (N4S13_21760) | 76544..77305 | + | 762 | WP_070503658.1 | PTS sugar transporter subunit IIC | - |
| N4S13_RS21765 (N4S13_21765) | 77305..78108 | + | 804 | WP_112132920.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| N4S13_RS21770 (N4S13_21770) | 78123..79127 | + | 1005 | WP_070503215.1 | SIS domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|