MGE detailed information
MGE type: Conjugative plasmid MGE length: 112409 bp
Accession: NZ_CP104372 Location: 1..112409 Organism: Escherichia coli strain 2021CK-01784 Replicon: plasmid unnamed1
Accession: NZ_CP104372 Location: 1..112409 Organism: Escherichia coli strain 2021CK-01784 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4502_RS23610 (N4502_23610) | 1..1014 | + | 1014 | WP_040120366.1 | plasmid replication initiator RepA | - |
| N4502_RS23615 (N4502_23615) | 1988..2314 | - | 327 | WP_004201125.1 | C2H2-type zinc finger protein | - |
| N4502_RS23620 (N4502_23620) | 2496..2777 | + | 282 | WP_001568067.1 | hypothetical protein | - |
| N4502_RS23625 (N4502_23625) | 2831..3442 | + | 612 | WP_000176305.1 | DUF2913 family protein | - |
| N4502_RS23630 (N4502_23630) | 3439..3549 | - | 111 | Protein_4 | hypothetical protein | - |
| N4502_RS23635 (N4502_23635) | 3591..4295 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N4502_RS23640 (N4502_23640) | 4359..4688 | + | 330 | WP_260746216.1 | divalent-cation tolerance protein CutA | - |
| N4502_RS23645 (N4502_23645) | 4693..5067 | + | 375 | Protein_7 | protein-disulfide reductase DsbD family protein | - |
| N4502_RS23650 (N4502_23650) | 5167..5724 | + | 558 | Protein_8 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
| N4502_RS23655 (N4502_23655) | 5735..6373 | - | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| N4502_RS23660 (N4502_23660) | 6378..6743 | - | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| N4502_RS23665 (N4502_23665) | 6747..7559 | - | 813 | WP_004201164.1 | Metallo-beta-lactamase type 2 | ARG |
| N4502_RS23670 (N4502_23670) | 7774..8805 | - | 1032 | WP_071905678.1 | IS630 family transposase ISSpu2 | Transposase |
| N4502_RS23675 (N4502_23675) | 8905..9783 | - | 879 | Protein_13 | IS30 family transposase ISAba125 | Transposase |
| N4502_RS23680 (N4502_23680) | 9992..10771 | - | 780 | WP_014386410.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| N4502_RS23685 (N4502_23685) | 10877..11047 | - | 171 | Protein_15 | integrase core domain-containing protein | - |
| N4502_RS23690 (N4502_23690) | 11187..11732 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| N4502_RS23695 (N4502_23695) | 11869..12441 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| N4502_RS23700 (N4502_23700) | 12478..13869 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| N4502_RS23705 (N4502_23705) | 13902..14330 | + | 429 | Protein_19 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| N4502_RS23710 (N4502_23710) | 14649..15305 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| N4502_RS23715 (N4502_23715) | 15700..16715 | + | 1016 | Protein_21 | IS3 family transposase ISEc36 | Transposase |
| N4502_RS23720 (N4502_23720) | 16758..19541 | - | 2784 | Protein_22 | Tn3 family transposase TnpA_Tn3 | Transposase |
| N4502_RS23725 (N4502_23725) | 19606..19899 | + | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| N4502_RS23730 (N4502_23730) | 19946..20821 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| N4502_RS23735 (N4502_23735) | 21077..22339 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| N4502_RS23740 (N4502_23740) | 22521..22739 | - | 219 | WP_001143771.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| N4502_RS23745 (N4502_23745) | 22903..23460 | + | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| N4502_RS23750 (N4502_23750) | 23694..24248 | + | 555 | WP_063840280.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| N4502_RS23755 (N4502_23755) | 24318..25106 | + | 789 | WP_001206315.1 | Streptomycin 3''-adenylyltransferase | ARG |
| N4502_RS23760 (N4502_23760) | 25166..25990 | + | 825 | Protein_30 | OXA-9 family oxacillin-hydrolyzing class D beta-lactamase | - |
| N4502_RS23765 (N4502_23765) | 26190..26507 | + | 318 | Protein_31 | Tn3 family transposase TnpR_Tn3 | Transposase |
| N4502_RS23770 (N4502_23770) | 26690..27436 | + | 747 | Protein_32 | Beta-lactamase TEM | ARG |
| N4502_RS23780 (N4502_23780) | 28205..28894 | - | 690 | Protein_34 | ATP-binding protein | - |
| N4502_RS23785 (N4502_23785) | 28968..29384 | - | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N4502_RS23790 (N4502_23790) | 29381..29611 | - | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N4502_RS23795 (N4502_23795) | 29568..30027 | + | 460 | Protein_37 | hypothetical protein | - |
| N4502_RS23800 (N4502_23800) | 30176..30310 | + | 135 | WP_256340418.1 | hypothetical protein | - |
| N4502_RS23805 (N4502_23805) | 30322..30468 | + | 147 | WP_249557131.1 | hypothetical protein | - |
| N4502_RS23810 (N4502_23810) | 30514..30822 | + | 309 | WP_004152336.1 | hypothetical protein | - |
| N4502_RS23815 (N4502_23815) | 30850..31179 | + | 330 | WP_004152337.1 | hypothetical protein | - |
| N4502_RS23820 (N4502_23820) | 31205..31603 | + | 399 | WP_004171440.1 | hypothetical protein | - |
| N4502_RS23825 (N4502_23825) | 31610..31942 | + | 333 | WP_004152339.1 | hypothetical protein | - |
| N4502_RS23830 (N4502_23830) | 31942..32724 | + | 783 | WP_004152340.1 | site-specific integrase | - |
| N4502_RS23835 (N4502_23835) | 33616..33846 | - | 231 | WP_011977773.1 | hypothetical protein | - |
| N4502_RS23840 (N4502_23840) | 33938..34411 | - | 474 | WP_004152341.1 | YkgJ family cysteine cluster protein | - |
| N4502_RS23845 (N4502_23845) | 34531..35799 | - | 1269 | WP_004152342.1 | ISL3 family transposase ISKpn25 | Transposase |
| N4502_RS23850 (N4502_23850) | 35804..39061 | - | 3258 | WP_004152343.1 | DEAD/DEAH box helicase family protein | - |
| N4502_RS23855 (N4502_23855) | 39062..40378 | - | 1317 | WP_004152344.1 | restriction endonuclease subunit S | - |
| N4502_RS23860 (N4502_23860) | 40375..42402 | - | 2028 | WP_004152345.1 | class I SAM-dependent DNA methyltransferase | - |
| N4502_RS23865 (N4502_23865) | 42514..42729 | - | 216 | WP_004227314.1 | hypothetical protein | - |
| N4502_RS23870 (N4502_23870) | 42954..43286 | - | 333 | WP_004152347.1 | hypothetical protein | - |
| N4502_RS23875 (N4502_23875) | 43663..44637 | - | 975 | WP_004152348.1 | ParB family protein | - |
| N4502_RS23880 (N4502_23880) | 44634..45839 | - | 1206 | WP_004152349.1 | Plasmid partition protein A | VF |
| N4502_RS23885 (N4502_23885) | 46161..47057 | - | 897 | WP_004152350.1 | RepB family plasmid replication initiator protein | - |
| N4502_RS23890 (N4502_23890) | 47458..48729 | - | 1272 | WP_004152351.1 | Y-family DNA polymerase | - |
| N4502_RS23895 (N4502_23895) | 48729..49160 | - | 432 | WP_004152352.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N4502_RS23900 (N4502_23900) | 49392..50363 | + | 972 | WP_004152353.1 | plasmid segregation protein ParM | - |
| N4502_RS23905 (N4502_23905) | 50366..51037 | + | 672 | WP_004152354.1 | plasmid partitioning/stability family protein | - |
| N4502_RS23910 (N4502_23910) | 51098..51328 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| N4502_RS23915 (N4502_23915) | 51524..51693 | + | 170 | Protein_61 | hypothetical protein | - |
| N4502_RS23920 (N4502_23920) | 51765..52466 | + | 702 | WP_001568041.1 | DNA methylase | - |
| N4502_RS23925 (N4502_23925) | 52466..52687 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| N4502_RS23930 (N4502_23930) | 52697..53116 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| N4502_RS23935 (N4502_23935) | 53170..53937 | + | 768 | WP_032445745.1 | hypothetical protein | - |
| N4502_RS23940 (N4502_23940) | 54570..54998 | + | 429 | WP_001568045.1 | antirestriction protein | - |
| N4502_RS23945 (N4502_23945) | 55041..55547 | + | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| N4502_RS23950 (N4502_23950) | 55590..55781 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| N4502_RS23955 (N4502_23955) | 55969..56223 | + | 255 | WP_032445741.1 | DNA polymerase III subunit theta | - |
| N4502_RS23960 (N4502_23960) | 56258..56575 | + | 318 | WP_004118473.1 | hypothetical protein | - |
| N4502_RS23965 (N4502_23965) | 57371..57913 | + | 543 | WP_014343512.1 | single-stranded DNA-binding protein | - |
| N4502_RS23970 (N4502_23970) | 57962..58210 | + | 249 | WP_032445658.1 | DUF905 domain-containing protein | - |
| N4502_RS23975 (N4502_23975) | 58280..60337 | + | 2058 | WP_040120383.1 | ParB/RepB/Spo0J family partition protein | - |
| N4502_RS23980 (N4502_23980) | 60382..60813 | + | 432 | WP_004194235.1 | conjugation system SOS inhibitor PsiB | - |
| N4502_RS23985 (N4502_23985) | 60810..61538 | + | 729 | WP_015065618.1 | plasmid SOS inhibition protein A | - |
| N4502_RS23990 (N4502_23990) | 61535..61861 | + | 327 | WP_001568059.1 | hypothetical protein | - |
| N4502_RS23995 (N4502_23995) | 61917..62291 | + | 375 | WP_040120382.1 | hypothetical protein | - |
| N4502_RS24000 (N4502_24000) | 62495..63864 | + | 1370 | WP_085949440.1 | IS3 family transposase ISKpn8 | Transposase |
| N4502_RS24005 (N4502_24005) | 63908..64057 | + | 150 | Protein_79 | FlmC family protein | - |
| N4502_RS24010 (N4502_24010) | 64008..64124 | + | 117 | WP_055313929.1 | type I toxin-antitoxin system Hok family toxin | - |
| N4502_RS24015 (N4502_24015) | 64823..65095 | + | 273 | WP_032445785.1 | hypothetical protein | - |
| N4502_RS24020 (N4502_24020) | 65092..65442 | + | 351 | WP_032445787.1 | hypothetical protein | - |
| N4502_RS24025 (N4502_24025) | 65457..65774 | + | 318 | WP_032445789.1 | hypothetical protein | - |
| N4502_RS24030 (N4502_24030) | 66615..66971 | + | 357 | WP_019706019.1 | hypothetical protein | - |
| N4502_RS24035 (N4502_24035) | 67032..67244 | + | 213 | WP_032445756.1 | hypothetical protein | - |
| N4502_RS24040 (N4502_24040) | 67255..67479 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| N4502_RS24045 (N4502_24045) | 67560..67880 | + | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N4502_RS24050 (N4502_24050) | 67870..68148 | + | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| N4502_RS24055 (N4502_24055) | 68149..68562 | + | 414 | WP_040120381.1 | helix-turn-helix domain-containing protein | - |
| N4502_RS24060 (N4502_24060) | 69280..69660 | + | 381 | WP_020802391.1 | hypothetical protein | - |
| N4502_RS24065 (N4502_24065) | 69727..70074 | + | 348 | WP_032445771.1 | hypothetical protein | - |
| N4502_RS24070 (N4502_24070) | 70169..70315 | + | 147 | WP_004152750.1 | hypothetical protein | - |
| N4502_RS24075 (N4502_24075) | 70366..71199 | + | 834 | WP_032445769.1 | N-6 DNA methylase | - |
| N4502_RS24080 (N4502_24080) | 72016..72837 | + | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| N4502_RS24085 (N4502_24085) | 72870..73199 | + | 330 | WP_011977736.1 | DUF5983 family protein | - |
| N4502_RS24090 (N4502_24090) | 73232..73717 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| N4502_RS24095 (N4502_24095) | 74149..74541 | + | 393 | WP_004194114.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| N4502_RS24100 (N4502_24100) | 74771..75472 | + | 702 | WP_040120380.1 | hypothetical protein | - |
| N4502_RS24105 (N4502_24105) | 75558..75758 | + | 201 | WP_046664192.1 | TraY domain-containing protein | - |
| N4502_RS24110 (N4502_24110) | 75826..76194 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| N4502_RS24115 (N4502_24115) | 76208..76513 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| N4502_RS24120 (N4502_24120) | 76533..77099 | + | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| N4502_RS24125 (N4502_24125) | 77086..77826 | + | 741 | WP_040120379.1 | type-F conjugative transfer system secretin TraK | - |
| N4502_RS24130 (N4502_24130) | 77826..79250 | + | 1425 | WP_040120378.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| N4502_RS24135 (N4502_24135) | 79322..79906 | + | 585 | WP_040120377.1 | type IV conjugative transfer system lipoprotein TraV | - |
| N4502_RS24140 (N4502_24140) | 80229..80447 | + | 219 | WP_004195468.1 | hypothetical protein | - |
| N4502_RS24145 (N4502_24145) | 80448..80759 | + | 312 | WP_029497417.1 | hypothetical protein | - |
| N4502_RS24150 (N4502_24150) | 80826..81230 | + | 405 | WP_004197817.1 | hypothetical protein | - |
| N4502_RS24155 (N4502_24155) | 81273..81425 | + | 153 | WP_224518895.1 | hypothetical protein | - |
| N4502_RS24160 (N4502_24160) | 81607..82005 | + | 399 | WP_023179972.1 | hypothetical protein | - |
| N4502_RS24165 (N4502_24165) | 82077..84716 | + | 2640 | WP_013214024.1 | type IV secretion system protein TraC | - |
| N4502_RS24170 (N4502_24170) | 84716..85105 | + | 390 | WP_004167468.1 | type-F conjugative transfer system protein TrbI | - |
| N4502_RS24175 (N4502_24175) | 85105..85740 | + | 636 | WP_029497419.1 | type-F conjugative transfer system protein TraW | - |
| N4502_RS24180 (N4502_24180) | 85775..86176 | + | 402 | WP_040120376.1 | hypothetical protein | - |
| N4502_RS24185 (N4502_24185) | 86173..87162 | + | 990 | WP_029497420.1 | conjugal transfer pilus assembly protein TraU | - |
| N4502_RS24190 (N4502_24190) | 87175..87813 | + | 639 | WP_015065635.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| N4502_RS24195 (N4502_24195) | 87872..89827 | + | 1956 | WP_040120375.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| N4502_RS24200 (N4502_24200) | 89859..90113 | + | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| N4502_RS24205 (N4502_24205) | 90091..90339 | + | 249 | WP_004152675.1 | hypothetical protein | - |
| N4502_RS24210 (N4502_24210) | 90352..90678 | + | 327 | WP_004144402.1 | hypothetical protein | - |
| N4502_RS24215 (N4502_24215) | 90699..91451 | + | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| N4502_RS24220 (N4502_24220) | 91462..91701 | + | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| N4502_RS24225 (N4502_24225) | 91673..92230 | + | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| N4502_RS24230 (N4502_24230) | 92276..92719 | + | 444 | WP_014343488.1 | F-type conjugal transfer protein TrbF | - |
| N4502_RS24235 (N4502_24235) | 92697..94076 | + | 1380 | WP_072198320.1 | conjugal transfer pilus assembly protein TraH | - |
| N4502_RS24240 (N4502_24240) | 94076..96925 | + | 2850 | WP_040120373.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| N4502_RS24245 (N4502_24245) | 96931..97458 | + | 528 | WP_040120388.1 | conjugal transfer protein TraS | - |
| N4502_RS24250 (N4502_24250) | 97647..98378 | + | 732 | WP_004152629.1 | conjugal transfer complement resistance protein TraT | - |
| N4502_RS24255 (N4502_24255) | 98571..99260 | + | 690 | WP_072198322.1 | hypothetical protein | - |
| N4502_RS24260 (N4502_24260) | 99389..101701 | + | 2313 | WP_040120372.1 | type IV conjugative transfer system coupling protein TraD | - |
| N4502_RS24265 (N4502_24265) | 101701..106962 | + | 5262 | WP_040120371.1 | Multifunctional conjugation protein TraI | Relaxase |
| N4502_RS24270 (N4502_24270) | 107042..107767 | + | 726 | WP_040120370.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| N4502_RS24275 (N4502_24275) | 107839..108432 | + | 594 | WP_004152380.1 | fertility inhibition protein FinO | - |
| N4502_RS24280 (N4502_24280) | 108593..109195 | + | 603 | WP_064750782.1 | PIN domain-containing protein | - |
| N4502_RS24285 (N4502_24285) | 109245..109889 | + | 645 | WP_004153014.1 | hypothetical protein | - |
| N4502_RS24290 (N4502_24290) | 109945..110595 | + | 651 | WP_040120368.1 | DUF2726 domain-containing protein | - |
| N4502_RS24295 (N4502_24295) | 110592..110900 | + | 309 | WP_040120367.1 | hypothetical protein | - |
| N4502_RS24300 (N4502_24300) | 111004..111555 | + | 552 | WP_013609507.1 | Phospholipase D | VF |
| N4502_RS24305 (N4502_24305) | 111673..111942 | + | 270 | WP_072198323.1 | replication regulatory protein RepA | - |
| N4502_RS24310 (N4502_24310) | 112174..112251 | + | 78 | WP_071905679.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|