MGE detailed information
MGE type: Conjugative plasmid MGE length: 93844 bp
Accession: NZ_CP104367 Location: 1..93844 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain PNUSAS028809 Replicon: plasmid unnamed1
Accession: NZ_CP104367 Location: 1..93844 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain PNUSAS028809 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4533_RS23675 (N4533_23675) | 1237..1681 | - | 445 | Protein_1 | tyrosine-type recombinase/integrase | - |
| N4533_RS23680 (N4533_23680) | 1850..2231 | - | 382 | Protein_2 | YgiW/YdeI family stress tolerance OB fold protein | - |
| N4533_RS23685 (N4533_23685) | 2950..3252 | + | 303 | WP_000979451.1 | hypothetical protein | VF |
| N4533_RS23690 (N4533_23690) | 3527..4045 | + | 519 | WP_000748205.1 | hypothetical protein | VF |
| N4533_RS23695 (N4533_23695) | 4273..6681 | + | 2409 | WP_000007893.1 | hypothetical protein | VF |
| N4533_RS23700 (N4533_23700) | 6674..7366 | + | 693 | WP_001038510.1 | hypothetical protein | VF |
| N4533_RS23705 (N4533_23705) | 7381..7938 | + | 558 | WP_010999940.1 | membrane protein | - |
| N4533_RS23710 (N4533_23710) | 8191..9066 | + | 876 | WP_014343944.1 | hypothetical protein | - |
| N4533_RS23715 (N4533_23715) | 9498..9710 | + | 213 | WP_000004313.1 | hypothetical protein | VF |
| N4533_RS23720 (N4533_23720) | 9695..10045 | + | 351 | WP_001526811.1 | Transcriptional regulatory protein RcsB | VF |
| N4533_RS23725 (N4533_23725) | 10290..10943 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| N4533_RS23730 (N4533_23730) | 10933..11079 | + | 147 | WP_001192557.1 | hypothetical protein | - |
| N4533_RS23735 (N4533_23735) | 11076..11975 | + | 900 | WP_010999938.1 | YjiK family protein | - |
| N4533_RS23740 (N4533_23740) | 12065..12622 | + | 558 | WP_000725062.1 | hypothetical protein | VF |
| N4533_RS23745 (N4533_23745) | 12889..13647 | + | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| N4533_RS23750 (N4533_23750) | 13744..13938 | - | 195 | Protein_16 | SdiA-regulated domain-containing protein | - |
| N4533_RS23755 (N4533_23755) | 14825..15706 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| N4533_RS23760 (N4533_23760) | 15687..15764 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| N4533_RS23765 (N4533_23765) | 16014..16280 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| N4533_RS23770 (N4533_23770) | 16391..16957 | - | 567 | Protein_20 | phospholipase D family protein | - |
| N4533_RS23775 (N4533_23775) | 17067..17183 | - | 117 | WP_001526822.1 | hypothetical protein | - |
| N4533_RS23780 (N4533_23780) | 17235..17519 | - | 285 | WP_000477658.1 | hypothetical protein | - |
| N4533_RS23785 (N4533_23785) | 17634..18197 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| N4533_RS23790 (N4533_23790) | 18252..18992 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| N4533_RS23795 (N4533_23795) | 19012..24270 | - | 5259 | WP_000986921.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| N4533_RS23800 (N4533_23800) | 24352..24579 | + | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| N4533_RS23805 (N4533_23805) | 24579..24977 | + | 399 | WP_000911322.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N4533_RS23810 (N4533_23810) | 24986..27148 | - | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| N4533_RS23815 (N4533_23815) | 27525..28256 | - | 732 | WP_000782438.1 | conjugal transfer complement resistance protein TraT | - |
| N4533_RS23820 (N4533_23820) | 28292..28786 | - | 495 | WP_010999946.1 | entry exclusion protein | - |
| N4533_RS23825 (N4533_23825) | 28802..31624 | - | 2823 | WP_001007086.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| N4533_RS23830 (N4533_23830) | 31621..33003 | - | 1383 | WP_001161719.1 | conjugal transfer pilus assembly protein TraH | - |
| N4533_RS23835 (N4533_23835) | 32993..33541 | - | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| N4533_RS23840 (N4533_23840) | 33528..33821 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| N4533_RS23845 (N4533_23845) | 34035..34784 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| N4533_RS23850 (N4533_23850) | 34796..35011 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| N4533_RS23855 (N4533_23855) | 35022..36848 | - | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| N4533_RS23860 (N4533_23860) | 36845..37264 | - | 420 | WP_001229397.1 | HNH endonuclease signature motif containing protein | - |
| N4533_RS23865 (N4533_23865) | 37301..37939 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| N4533_RS23870 (N4533_23870) | 37924..38232 | - | 309 | WP_010999945.1 | hypothetical protein | - |
| N4533_RS23875 (N4533_23875) | 38251..39243 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| N4533_RS23880 (N4533_23880) | 39240..39872 | - | 633 | WP_140236651.1 | type-F conjugative transfer system protein TraW | - |
| N4533_RS23885 (N4533_23885) | 39869..40255 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| N4533_RS23890 (N4533_23890) | 40230..42878 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| N4533_RS23895 (N4533_23895) | 42894..43157 | - | 264 | WP_001239255.1 | hypothetical protein | - |
| N4533_RS23900 (N4533_23900) | 43274..43741 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| N4533_RS23905 (N4533_23905) | 43734..43955 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| N4533_RS23910 (N4533_23910) | 44090..44605 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| N4533_RS23915 (N4533_23915) | 44602..44847 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| N4533_RS23920 (N4533_23920) | 44825..45421 | - | 597 | Protein_50 | conjugal transfer protein TraP | - |
| N4533_RS23925 (N4533_23925) | 45411..46832 | - | 1422 | WP_000146700.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| N4533_RS23930 (N4533_23930) | 46832..47572 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| N4533_RS23935 (N4533_23935) | 47559..48125 | - | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| N4533_RS23940 (N4533_23940) | 48147..48458 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| N4533_RS23945 (N4533_23945) | 48473..48835 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| N4533_RS23950 (N4533_23950) | 48877..49104 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| N4533_RS23955 (N4533_23955) | 49198..49884 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| N4533_RS23960 (N4533_23960) | 50077..50457 | - | 381 | WP_001151546.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| N4533_RS23965 (N4533_23965) | 50872..51342 | + | 471 | WP_001526856.1 | hypothetical protein | VF |
| N4533_RS23970 (N4533_23970) | 51653..52471 | - | 819 | Protein_60 | DUF945 domain-containing protein | - |
| N4533_RS23975 (N4533_23975) | 52574..52732 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| N4533_RS23980 (N4533_23980) | 52818..52946 | - | 129 | WP_000372429.1 | hypothetical protein | - |
| N4533_RS23985 (N4533_23985) | 52981..53718 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| N4533_RS23990 (N4533_23990) | 53715..54149 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| N4533_RS23995 (N4533_23995) | 54189..56186 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| N4533_RS24000 (N4533_24000) | 56255..56497 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| N4533_RS24005 (N4533_24005) | 56552..57070 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| N4533_RS24010 (N4533_24010) | 57664..57819 | - | 156 | WP_001526868.1 | hypothetical protein | - |
| N4533_RS24015 (N4533_24015) | 57783..58106 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| N4533_RS24020 (N4533_24020) | 58342..58776 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| N4533_RS24025 (N4533_24025) | 58843..59277 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| N4533_RS24030 (N4533_24030) | 59773..60537 | - | 765 | WP_001246548.1 | membrane protein | - |
| N4533_RS24035 (N4533_24035) | 60609..61022 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| N4533_RS24040 (N4533_24040) | 61078..61299 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| N4533_RS24045 (N4533_24045) | 61299..61979 | - | 681 | WP_000088645.1 | DNA methylase | - |
| N4533_RS24050 (N4533_24050) | 62142..62423 | + | 282 | WP_146671468.1 | hypothetical protein | - |
| N4533_RS24055 (N4533_24055) | 62361..62717 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| N4533_RS24060 (N4533_24060) | 62710..63180 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| N4533_RS24065 (N4533_24065) | 63691..64113 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N4533_RS24070 (N4533_24070) | 64113..65387 | + | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| N4533_RS24075 (N4533_24075) | 65469..66443 | - | 975 | WP_000064274.1 | ParB family protein | - |
| N4533_RS24080 (N4533_24080) | 66443..67648 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| N4533_RS24085 (N4533_24085) | 68063..69004 | + | 942 | WP_000728917.1 | hypothetical protein | VF |
| N4533_RS24090 (N4533_24090) | 69001..69602 | - | 602 | Protein_84 | DUF2913 family protein | - |
| N4533_RS24095 (N4533_24095) | 69659..70075 | - | 417 | WP_000988946.1 | hypothetical protein | - |
| N4533_RS24100 (N4533_24100) | 70178..70594 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| N4533_RS24105 (N4533_24105) | 70680..71795 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| N4533_RS24110 (N4533_24110) | 72054..72542 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| N4533_RS24115 (N4533_24115) | 73197..73937 | + | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| N4533_RS24120 (N4533_24120) | 74144..74704 | + | 561 | WP_001240331.1 | Tn3 family transposase ISPsy42 | Transposase |
| N4533_RS24125 (N4533_24125) | 74688..76352 | + | 1665 | WP_000098783.1 | IS481 family transposase ISAzs36 | Transposase |
| N4533_RS24130 (N4533_24130) | 76285..77310 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| N4533_RS24135 (N4533_24135) | 77499..78536 | - | 1038 | WP_001121399.1 | IS630 family transposase ISEc33 | Transposase |
| N4533_RS24140 (N4533_24140) | 79145..80038 | + | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| N4533_RS24145 (N4533_24145) | 80212..80376 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| N4533_RS24150 (N4533_24150) | 80550..81317 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| N4533_RS24155 (N4533_24155) | 81280..81447 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| N4533_RS24160 (N4533_24160) | 81499..83274 | + | 1776 | WP_001676648.1 | hypothetical protein | VF |
| N4533_RS24165 (N4533_24165) | 83555..84280 | + | 726 | WP_001122242.1 | hypothetical protein | VF |
| N4533_RS24170 (N4533_24170) | 84541..85191 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| N4533_RS24175 (N4533_24175) | 85318..85742 | - | 425 | Protein_101 | IS200-IS605 family transposase ISEc46 | Transposase |
| N4533_RS24180 (N4533_24180) | 85799..86149 | + | 351 | WP_001541541.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| N4533_RS24185 (N4533_24185) | 86216..86776 | - | 561 | WP_000900095.1 | hypothetical protein | VF |
| N4533_RS24190 (N4533_24190) | 86932..87219 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| N4533_RS24195 (N4533_24195) | 87496..87981 | - | 486 | WP_000905606.1 | membrane protein | - |
| N4533_RS24200 (N4533_24200) | 87975..88463 | - | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| N4533_RS24205 (N4533_24205) | 88650..89201 | - | 552 | WP_000545754.1 | hypothetical protein | VF |
| N4533_RS24210 (N4533_24210) | 89210..89992 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| N4533_RS24215 (N4533_24215) | 90027..90548 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| N4533_RS24220 (N4533_24220) | 90545..90835 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| N4533_RS24225 (N4533_24225) | 90837..91142 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | - |
| N4533_RS24230 (N4533_24230) | 91144..91362 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| N4533_RS24235 (N4533_24235) | 92038..92559 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| N4533_RS24240 (N4533_24240) | 92603..93031 | - | 429 | Protein_114 | hypothetical protein | - |
| N4533_RS24245 (N4533_24245) | 93043..93339 | + | 297 | WP_001687482.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|