MGE detailed information
MGE type: Prophage MGE length: 25384 bp
Accession: NZ_CP104366 Location: 2078173..2103556 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain PNUSAS028809 Replicon: chromosome
Accession: NZ_CP104366 Location: 2078173..2103556 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain PNUSAS028809 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4533_RS10060 () | 2074446..2075087 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| N4533_RS10065 () | 2075187..2076365 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| N4533_RS10070 () | 2076496..2076786 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| N4533_RS10075 () | 2076854..2077207 | + | 354 | WP_001042119.1 | protein YebF | - |
| N4533_RS10080 () | 2077301..2077960 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| N4533_RS10085 () | 2078173..2080224 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| N4533_RS10090 () | 2080259..2080957 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| N4533_RS10095 () | 2080981..2081637 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| N4533_RS10100 () | 2081745..2081975 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| N4533_RS10105 () | 2082113..2082487 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| N4533_RS10110 () | 2082488..2083363 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| N4533_RS10115 () | 2083380..2083733 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2083833..2083978 | - | 146 | - | - | Antitoxin Detail |
| - | 2083873..2083976 | + | 104 | - | - | Toxin Detail |
| N4533_RS10120 () | 2084107..2085030 | - | 924 | Protein_1978 | hypothetical protein ; Integrase | Integrase |
| N4533_RS10125 () | 2085294..2085755 | - | 462 | Protein_1979 | DNA breaking-rejoining protein | - |
| N4533_RS10130 () | 2085744..2085935 | + | 192 | Protein_1980 | glycoside hydrolase family 19 protein | - |
| N4533_RS10135 () | 2085989..2086522 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| N4533_RS10140 () | 2086779..2086946 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| N4533_RS10145 () | 2087254..2087514 | + | 261 | Protein_1983 | DUF1441 family protein | - |
| N4533_RS10150 () | 2087729..2088073 | + | 345 | Protein_1984 | macro domain-containing protein | - |
| N4533_RS10155 () | 2088083..2088553 | + | 471 | Protein_1985 | tail fiber assembly protein | - |
| N4533_RS10160 () | 2088650..2088850 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| N4533_RS10165 () | 2089240..2089420 | - | 181 | Protein_1987 | IS3 family transposase | - |
| N4533_RS10170 () | 2089411..2089512 | + | 102 | Protein_1988 | arsenic transporter | - |
| N4533_RS10175 () | 2090134..2090366 | + | 233 | Protein_1989 | helix-turn-helix domain-containing protein | - |
| N4533_RS10180 () | 2090693..2091307 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| N4533_RS10185 () | 2091317..2091475 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| N4533_RS10190 () | 2091608..2092522 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| N4533_RS10195 () | 2093826..2094248 | - | 423 | Protein_1993 | hypothetical protein ; Integrase | Integrase |
| N4533_RS10200 () | 2094318..2095512 | + | 1195 | Protein_1994 | IS256 family transposase IS285 | Transposase |
| N4533_RS10205 () | 2095658..2095798 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| N4533_RS10210 () | 2095964..2096233 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| N4533_RS10215 () | 2096603..2097022 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| N4533_RS10220 () | 2097410..2097886 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| N4533_RS10225 () | 2098216..2098611 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| N4533_RS10230 () | 2099295..2100017 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| N4533_RS10235 () | 2100302..2100466 | + | 165 | WP_001134856.1 | membrane protein | - |
| N4533_RS10240 () | 2100690..2101340 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| N4533_RS10245 () | 2101359..2101550 | - | 192 | WP_000457836.1 | YebW family protein | - |
| N4533_RS10250 () | 2101661..2101897 | - | 237 | WP_024131108.1 | YebV family protein | - |
| N4533_RS10255 () | 2102015..2103454 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| N4533_RS10260 () | 2103532..2106165 | - | 2634 | WP_001535256.1 | PqiB family protein | - |
| N4533_RS10265 () | 2106134..2107417 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| N4533_RS10270 () | 2107546..2108043 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.005 |