MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP104358 Location: 834404..845759 Organism: Salmonella enterica strain PNUSAS119065 Replicon: chromosome
Accession: NZ_CP104358 Location: 834404..845759 Organism: Salmonella enterica strain PNUSAS119065 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4275_RS03995 (829850) | 829850..830948 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| N4275_RS04000 (830958) | 830958..832475 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| N4275_RS04005 (832551) | 832551..833096 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| N4275_RS04010 (833361) | 833361..834119 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| N4275_RS04020 (834404) | 834404..835210 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| N4275_RS04025 (835490) | 835490..835741 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| N4275_RS04030 (835950) | 835950..836177 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| N4275_RS04035 (836177) | 836177..836575 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| N4275_RS04040 (837383) | 837383..837919 | + | 537 | WP_001038502.1 | hypothetical protein | VF |
| N4275_RS04045 (837966) | 837966..838598 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| N4275_RS04050 (839317) | 839317..839898 | + | 582 | WP_001244651.1 | hypothetical protein | VF |
| N4275_RS04055 (840018) | 840018..842501 | + | 2484 | WP_000705505.1 | hypothetical protein | VF |
| N4275_RS04060 (842542) | 842542..843285 | + | 744 | WP_260785398.1 | hypothetical protein | VF |
| N4275_RS04065 (843282) | 843282..844358 | + | 1077 | WP_001679840.1 | hypothetical protein | - |
| N4275_RS04070 (844502) | 844502..845014 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| N4275_RS04075 (845001) | 845001..845759 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| N4275_RS04080 (845969) | 845969..846829 | - | 861 | WP_000503684.1 | nickel/cobalt efflux protein RcnA | - |
| N4275_RS04085 (846951) | 846951..847223 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| N4275_RS04090 (847254) | 847254..848483 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| N4275_RS04095 (848625) | 848625..849080 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| N4275_RS04100 (849184) | 849184..850047 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |