MGE detailed information
MGE type: Genomic_island MGE length: 18423 bp
Accession: NZ_CP104354 Location: 2210640..2229062 Organism: Vibrio cholerae strain PNUSAV001140 Replicon: chromosome
Accession: NZ_CP104354 Location: 2210640..2229062 Organism: Vibrio cholerae strain PNUSAV001140 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4267_RS09970 (N4267_09970) | 2206262..2208238 | + | 1977 | WP_032480690.1 | type VI secretion system tip protein VgrG | - |
| N4267_RS09975 (N4267_09975) | 2208238..2209026 | + | 789 | WP_055030556.1 | DUF4123 domain-containing protein | - |
| N4267_RS09980 (N4267_09980) | 2209016..2210626 | + | 1611 | WP_134986941.1 | hypothetical protein | - |
| N4267_RS09985 (N4267_09985) | 2210832..2211620 | + | 789 | WP_134987360.1 | glycosyl hydrolase family 26 | - |
| N4267_RS09990 (N4267_09990) | 2211631..2211930 | + | 300 | WP_134986940.1 | type VI secretion system PAAR protein | - |
| N4267_RS09995 (N4267_09995) | 2212138..2212926 | + | 789 | WP_001953033.1 | glycosyl hydrolase | - |
| N4267_RS10000 (N4267_10000) | 2212937..2213128 | + | 192 | WP_134986939.1 | PAAR domain-containing protein | - |
| N4267_RS10005 (N4267_10005) | 2213438..2214470 | + | 1033 | Protein_1944 | IS481 family transposase | - |
| N4267_RS10010 (N4267_10010) | 2214530..2215090 | + | 561 | WP_260813056.1 | DUF2628 domain-containing protein | - |
| N4267_RS10015 (N4267_10015) | 2215163..2215702 | + | 540 | WP_055064936.1 | hypothetical protein | - |
| N4267_RS10020 (N4267_10020) | 2215861..2216037 | - | 177 | WP_260813058.1 | AlpA family transcriptional regulator | - |
| N4267_RS10025 (N4267_10025) | 2216181..2216657 | + | 477 | WP_010319169.1 | DNA repair protein RadC | - |
| N4267_RS10030 (N4267_10030) | 2216654..2217082 | + | 429 | WP_055035509.1 | DUF2787 domain-containing protein | - |
| N4267_RS10035 (N4267_10035) | 2217133..2217579 | + | 447 | WP_000065400.1 | DUF2787 domain-containing protein | - |
| N4267_RS10040 (N4267_10040) | 2217682..2218668 | + | 987 | WP_000858603.1 | GTPase family protein | - |
| N4267_RS10045 (N4267_10045) | 2218703..2219344 | - | 642 | WP_069647815.1 | inovirus Gp2 family protein | - |
| N4267_RS10050 (N4267_10050) | 2219945..2220742 | + | 798 | WP_260813059.1 | CopG family transcriptional regulator | - |
| N4267_RS10055 (N4267_10055) | 2220822..2221022 | - | 201 | WP_001114737.1 | AlpA family transcriptional regulator | - |
| N4267_RS10060 (N4267_10060) | 2221660..2223021 | + | 1362 | WP_260813060.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| N4267_RS10065 (N4267_10065) | 2223018..2223485 | + | 468 | WP_032472658.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| N4267_RS10070 (N4267_10070) | 2223913..2224491 | + | 579 | WP_134986936.1 | class I SAM-dependent methyltransferase | - |
| N4267_RS10075 (N4267_10075) | 2224495..2227443 | + | 2949 | WP_134986935.1 | DEAD/DEAH box helicase family protein | - |
| N4267_RS10080 (N4267_10080) | 2227514..2228215 | + | 702 | Protein_1959 | NERD domain-containing protein | - |
| N4267_RS10085 (N4267_10085) | 2228553..2229062 | - | 510 | WP_001077909.1 | hypothetical protein | - |
| N4267_RS10090 (N4267_10090) | 2229260..2230939 | - | 1680 | WP_071180703.1 | SWIM zinc finger domain-containing protein | - |
| N4267_RS10095 (N4267_10095) | 2231162..2231845 | + | 684 | WP_000841482.1 | VC0807 family protein | - |
| N4267_RS10100 (N4267_10100) | 2231915..2233531 | - | 1617 | WP_000620450.1 | NAD(P)/FAD-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|