MGE detailed information
MGE type: Genomic_island MGE length: 20029 bp
Accession: NZ_CP104328 Location: 3938922..3958950 Organism: Escherichia coli strain THB42-F2 Replicon: chromosome
Accession: NZ_CP104328 Location: 3938922..3958950 Organism: Escherichia coli strain THB42-F2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0499_RS19185 (3934401) | 3934401..3934904 | - | 504 | WP_072647342.1 | type 1 fimbria minor subunit FimG | - |
| N0499_RS19190 (3934917) | 3934917..3935447 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| N0499_RS19195 (3935457) | 3935457..3938093 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| N0499_RS19200 (3938160) | 3938160..3938885 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| N0499_RS19205 (3938922) | 3938922..3939461 | - | 540 | WP_000824114.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| N0499_RS19210 (3939526) | 3939526..3940074 | - | 549 | WP_000695564.1 | hypothetical protein | VF |
| N0499_RS19215 (3940556) | 3940556..3941110 | - | 555 | WP_000983104.1 | Methyl viologen resistance protein SmvA | VF |
| N0499_RS19225 (3942406) | 3942406..3943008 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| N0499_RS19230 (3944464) | 3944464..3945180 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| N0499_RS19235 (3945200) | 3945200..3946306 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| N0499_RS19240 (3946371) | 3946371..3947351 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| N0499_RS19245 (3947461) | 3947461..3947666 | + | 206 | Protein_3758 | HNH endonuclease | - |
| N0499_RS19250 (3947934) | 3947934..3949174 | - | 1241 | Protein_3759 | helicase YjhR | - |
| N0499_RS19255 (3949290) | 3949290..3949421 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| N0499_RS19260 (3949912) | 3949912..3950169 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| N0499_RS19265 (3950181) | 3950181..3950726 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| N0499_RS19270 (3950782) | 3950782..3951528 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| N0499_RS19275 (3951697) | 3951697..3951915 | + | 219 | Protein_3764 | hypothetical protein | - |
| N0499_RS19280 (3951953) | 3951953..3952069 | + | 117 | Protein_3765 | VOC family protein | - |
| N0499_RS19285 (3952314) | 3952314..3953435 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| N0499_RS19290 (3953432) | 3953432..3953710 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| N0499_RS19295 (3953722) | 3953722..3955035 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| N0499_RS19300 (3955048) | 3955048..3955854 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| N0499_RS19305 (3955985) | 3955985..3956416 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| N0499_RS19310 (3956428) | 3956428..3957060 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| N0499_RS19315 (3957077) | 3957077..3957859 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| N0499_RS19320 (3958162) | 3958162..3958950 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| N0499_RS19325 (3958955) | 3958955..3959860 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| N0499_RS19330 (3959871) | 3959871..3961838 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| N0499_RS19335 (3961945) | 3961945..3963294 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|