MGE detailed information
MGE type: Prophage MGE length: 38814 bp
Accession: NZ_CP104328 Location: 3517374..3556187 Organism: Escherichia coli strain THB42-F2 Replicon: chromosome
Accession: NZ_CP104328 Location: 3517374..3556187 Organism: Escherichia coli strain THB42-F2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0499_RS17125 (3513217) | 3513217..3516291 | + | 3075 | WP_000177906.1 | beta-galactosidase | - |
| N0499_RS17130 (3516343) | 3516343..3517317 | + | 975 | Protein_3346 | lactose permease | - |
| N0499_RS17135 (3517374) | 3517374..3518071 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| N0499_RS17140 (3518080) | 3518080..3518172 | + | 93 | Protein_3348 | sigma factor-binding protein Crl | - |
| N0499_RS17145 (3518211) | 3518211..3519266 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| N0499_RS17150 (3519554) | 3519554..3520657 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| N0499_RS17155 (3520669) | 3520669..3521922 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| N0499_RS17165 (3522494) | 3522494..3522835 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| N0499_RS17170 (3522856) | 3522856..3523173 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| N0499_RS17175 (3523192) | 3523192..3523413 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| N0499_RS17180 (3523422) | 3523422..3523898 | - | 477 | WP_000811693.1 | RadC family protein | - |
| N0499_RS17185 (3523914) | 3523914..3524372 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| N0499_RS17190 (3524470) | 3524470..3524709 | - | 240 | WP_000194654.1 | DUF905 family protein | - |
| N0499_RS17195 (3524786) | 3524786..3525253 | - | 468 | WP_001547765.1 | protein YkfB | - |
| N0499_RS17200 (3525276) | 3525276..3525719 | - | 444 | WP_000824223.1 | lipoprotein YafY | - |
| N0499_RS17205 (3525719) | 3525719..3525895 | - | 177 | WP_001285112.1 | hypothetical protein | - |
| N0499_RS17210 (3525942) | 3525942..3526133 | - | 192 | Protein_3361 | DeoR family transcriptional regulator | - |
| N0499_RS17215 (3526350) | 3526350..3527171 | - | 822 | WP_000197389.1 | DUF932 domain-containing protein | - |
| N0499_RS17220 (3527263) | 3527263..3528126 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| N0499_RS17225 (3528455) | 3528455..3529348 | - | 894 | WP_000770246.1 | LysR substrate-binding domain-containing protein | - |
| N0499_RS17230 (3529444) | 3529444..3529701 | + | 258 | Protein_3365 | IS3 family transposase ISEc52 | Transposase |
| N0499_RS17235 (3529769) | 3529769..3530920 | + | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| N0499_RS17240 (3530930) | 3530930..3531355 | + | 426 | Protein_3367 | IS3 family transposase | - |
| N0499_RS17245 (3532028) | 3532028..3533119 | + | 1092 | Protein_3368 | reverse transcriptase domain-containing protein | - |
| N0499_RS17250 (3533267) | 3533267..3534247 | - | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| N0499_RS17255 (3534491) | 3534491..3535894 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| N0499_RS17260 (3535881) | 3535881..3536813 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| N0499_RS17265 (3536922) | 3536922..3537968 | - | 1047 | WP_000192349.1 | Phospho-2-dehydro-3-deoxyheptonate aldolase | VF |
| N0499_RS17270 (3537980) | 3537980..3538327 | - | 348 | Protein_3373 | ABC transporter permease subunit | - |
| N0499_RS17280 (3539097) | 3539097..3539270 | + | 174 | Protein_3375 | IS30 family transposase | - |
| N0499_RS17285 (3539280) | 3539280..3539528 | - | 249 | Protein_3376 | IS3 family transposase ISEhe3 | Transposase |
| N0499_RS17290 (3539551) | 3539551..3539901 | - | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| N0499_RS17295 (3539915) | 3539915..3539980 | - | 66 | Protein_3378 | hypothetical protein | - |
| N0499_RS17300 (3539995) | 3539995..3541149 | - | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| N0499_RS17305 (3541444) | 3541444..3542352 | + | 909 | WP_072647389.1 | 2-keto-3-deoxygluconate aldolase | - |
| N0499_RS17310 (3542367) | 3542367..3544334 | + | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| N0499_RS17315 (3544561) | 3544561..3545943 | + | 1383 | WP_000192863.1 | MFS transporter | - |
| N0499_RS17320 (3545955) | 3545955..3547565 | + | 1611 | WP_000406871.1 | glycoside hydrolase family 43 protein | - |
| N0499_RS17325 (3547570) | 3547570..3548328 | - | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| N0499_RS17330 (3548467) | 3548467..3549471 | - | 1005 | WP_001281825.1 | putative ABC transporter ATP-binding protein YbiT | VF |
| N0499_RS17335 (3549441) | 3549441..3549536 | - | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| N0499_RS17340 (3549595) | 3549595..3549798 | + | 204 | Protein_3387 | YfjI family protein | - |
| N0499_RS17350 (3550666) | 3550666..3551397 | + | 732 | WP_000388269.1 | protein YagJ | - |
| N0499_RS17355 (3551488) | 3551488..3552114 | - | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| N0499_RS17360 (3552386) | 3552386..3553084 | - | 699 | WP_001214248.1 | recombinase family protein | - |
| N0499_RS17365 (3553111) | 3553111..3553965 | - | 855 | WP_000072039.1 | protein YagM | - |
| N0499_RS17370 (3554084) | 3554084..3554308 | - | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| N0499_RS17375 (3554305) | 3554305..3554745 | - | 441 | WP_000224818.1 | protein YagN | - |
| N0499_RS17380 (3554862) | 3554862..3556262 | - | 1401 | WP_001407714.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| N0499_RS17385 (3556547) | 3556547..3556885 | - | 339 | Protein_3396 | LysR substrate-binding domain-containing protein | - |
| N0499_RS17390 (3556936) | 3556936..3557892 | - | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| N0499_RS17395 (3557902) | 3557902..3560100 | - | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| N0499_RS17400 (3560097) | 3560097..3561053 | - | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|