MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP104274 Location: 4190459..4209711 Organism: Escherichia coli strain Ec15103 Replicon: chromosome
Accession: NZ_CP104274 Location: 4190459..4209711 Organism: Escherichia coli strain Ec15103 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N2O69_RS20530 (4185938) | 4185938..4186441 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| N2O69_RS20535 (4186454) | 4186454..4186984 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| N2O69_RS20540 (4186994) | 4186994..4189630 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| N2O69_RS20545 (4189697) | 4189697..4190422 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| N2O69_RS20550 (4190459) | 4190459..4190998 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| N2O69_RS20555 (4191063) | 4191063..4191611 | - | 549 | WP_001774144.1 | Type-1 fimbrial protein, A chain | VF |
| N2O69_RS20560 (4192093) | 4192093..4192689 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| N2O69_RS20565 (4193167) | 4193167..4193769 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| N2O69_RS20570 (4195225) | 4195225..4195941 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| N2O69_RS20575 (4195961) | 4195961..4197067 | + | 1107 | WP_001774143.1 | N-acetylneuraminate epimerase | - |
| N2O69_RS20580 (4197132) | 4197132..4198112 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| N2O69_RS20585 (4198222) | 4198222..4198427 | + | 206 | Protein_4030 | HNH endonuclease | - |
| N2O69_RS20590 (4198695) | 4198695..4199935 | - | 1241 | Protein_4031 | helicase YjhR | - |
| N2O69_RS20595 (4200051) | 4200051..4200182 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| N2O69_RS20600 (4200673) | 4200673..4200930 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| N2O69_RS20605 (4200942) | 4200942..4201487 | + | 546 | WP_001540600.1 | N-acetyltransferase | Antitoxin Detail |
| N2O69_RS20610 (4201543) | 4201543..4202289 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| N2O69_RS20615 (4202458) | 4202458..4202676 | + | 219 | Protein_4036 | hypothetical protein | - |
| N2O69_RS20620 (4202714) | 4202714..4202830 | + | 117 | Protein_4037 | VOC family protein | - |
| N2O69_RS20625 (4203075) | 4203075..4204196 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| N2O69_RS20630 (4204193) | 4204193..4204471 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| N2O69_RS20635 (4204483) | 4204483..4205796 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| N2O69_RS20640 (4205809) | 4205809..4206615 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| N2O69_RS20645 (4206746) | 4206746..4207177 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| N2O69_RS20650 (4207189) | 4207189..4207821 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| N2O69_RS20655 (4207838) | 4207838..4208620 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| N2O69_RS20660 (4208923) | 4208923..4209711 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| N2O69_RS20665 (4209716) | 4209716..4210621 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| N2O69_RS20670 (4210632) | 4210632..4212599 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| N2O69_RS20675 (4212706) | 4212706..4214055 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|