MGE detailed information
MGE type: Prophage MGE length: 50672 bp
Accession: NZ_CP104254 Location: 615817..666488 Organism: Pseudomonas aeruginosa strain PALA1 Replicon: chromosome
Accession: NZ_CP104254 Location: 615817..666488 Organism: Pseudomonas aeruginosa strain PALA1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA1_RS02870 (PALA1_00572) | 611505..614276 | - | 2772 | WP_021263067.1 | ImpA family metalloprotease | - |
| PALA1_RS02875 | 614376..614519 | + | 144 | WP_003085001.1 | hypothetical protein | - |
| PALA1_RS02880 (PALA1_00573) | 614947..615225 | + | 279 | Protein_574 | type II toxin-antitoxin system HipA family toxin | - |
| PALA1_RS02885 (PALA1_00574) | 615817..615999 | + | 183 | WP_071534354.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PALA1_RS02890 (PALA1_00575) | 616027..616431 | + | 405 | WP_012077229.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PALA1_RS02895 (PALA1_00576) | 616474..617445 | - | 972 | WP_012077228.1 | hypothetical protein | - |
| PALA1_RS02900 (PALA1_00577) | 617430..618128 | - | 699 | WP_033896049.1 | hypothetical protein | - |
| PALA1_RS02905 (PALA1_00578) | 618128..618667 | - | 540 | WP_012074127.1 | hypothetical protein | - |
| PALA1_RS02910 (PALA1_00579) | 618664..619584 | - | 921 | WP_269972734.1 | hypothetical protein | - |
| PALA1_RS02915 (PALA1_00580) | 619581..620291 | - | 711 | WP_012074129.1 | hypothetical protein | - |
| PALA1_RS02920 (PALA1_00581) | 620305..622269 | - | 1965 | WP_025297588.1 | phage tail protein | - |
| PALA1_RS02925 (PALA1_00582) | 622281..622805 | - | 525 | WP_012074131.1 | phage tail protein | - |
| PALA1_RS02930 (PALA1_00583) | 622798..623970 | - | 1173 | WP_012074132.1 | baseplate J/gp47 family protein | - |
| PALA1_RS02935 (PALA1_00584) | 623967..624287 | - | 321 | WP_012074133.1 | DUF2590 family protein | - |
| PALA1_RS02940 (PALA1_00585) | 624284..626338 | - | 2055 | WP_012074134.1 | phage tail tape measure protein | - |
| PALA1_RS02945 | 626353..626493 | - | 141 | WP_012074135.1 | hypothetical protein | - |
| PALA1_RS02950 (PALA1_00586) | 626517..626804 | - | 288 | WP_012074136.1 | putative phage tail assembly chaperone | - |
| PALA1_RS02955 (PALA1_00587) | 626801..627286 | - | 486 | WP_012074137.1 | lysis system i-spanin subunit Rz | - |
| PALA1_RS02960 (PALA1_00588) | 627283..627744 | - | 462 | WP_012074138.1 | lysozyme | - |
| PALA1_RS02965 (PALA1_00589) | 627741..628046 | - | 306 | WP_025297585.1 | hypothetical protein | - |
| PALA1_RS02970 (PALA1_00590) | 628046..628255 | - | 210 | WP_012074140.1 | TraR/DksA family transcriptional regulator | - |
| PALA1_RS02975 (PALA1_00591) | 628255..628704 | - | 450 | WP_012074141.1 | DUF2597 family protein | - |
| PALA1_RS02980 (PALA1_00592) | 628708..629823 | - | 1116 | WP_012074142.1 | DUF2586 domain-containing protein | - |
| PALA1_RS02985 (PALA1_00593) | 629835..630503 | - | 669 | WP_050159682.1 | virion morphogenesis protein | - |
| PALA1_RS02990 (PALA1_00594) | 630496..630933 | - | 438 | WP_050159684.1 | phage tail protein | - |
| PALA1_RS02995 (PALA1_00595) | 630933..631394 | - | 462 | WP_019725789.1 | head completion/stabilization protein | - |
| PALA1_RS03000 (PALA1_00596) | 631492..632226 | - | 735 | WP_050159686.1 | phage terminase small subunit | - |
| PALA1_RS03005 (PALA1_00597) | 632223..633245 | - | 1023 | WP_012074147.1 | phage major capsid protein, P2 family | - |
| PALA1_RS03010 (PALA1_00598) | 633245..634198 | - | 954 | WP_019725791.1 | GPO family capsid scaffolding protein | - |
| PALA1_RS03015 (PALA1_00599) | 634356..636389 | + | 2034 | WP_050159688.1 | terminase family protein | - |
| PALA1_RS03020 (PALA1_00600) | 636316..637170 | + | 855 | WP_025982286.1 | phage portal protein | - |
| PALA1_RS03025 | 637215..637472 | + | 258 | WP_019725794.1 | ogr/Delta-like zinc finger family protein | - |
| PALA1_RS03030 (PALA1_00602) | 638038..638316 | - | 279 | WP_019725795.1 | hypothetical protein | - |
| PALA1_RS03035 (PALA1_00603) | 638313..638543 | - | 231 | WP_019725796.1 | hypothetical protein | - |
| PALA1_RS03040 (PALA1_00604) | 638540..638785 | - | 246 | WP_019725797.1 | Arc family DNA-binding protein | - |
| PALA1_RS03045 (PALA1_00605) | 638778..639044 | - | 267 | WP_019725798.1 | hypothetical protein | - |
| PALA1_RS03050 (PALA1_00606) | 639115..639474 | - | 360 | WP_019725799.1 | hypothetical protein | - |
| PALA1_RS03055 (PALA1_00607) | 639504..639851 | - | 348 | WP_023126984.1 | hypothetical protein | - |
| PALA1_RS03060 (PALA1_00608) | 639876..640283 | - | 408 | WP_129374024.1 | hypothetical protein | - |
| PALA1_RS03065 (PALA1_00609) | 640298..640699 | - | 402 | WP_023126986.1 | hypothetical protein | - |
| PALA1_RS03070 (PALA1_00610) | 641141..643831 | - | 2691 | WP_019725802.1 | toprim domain-containing protein | - |
| PALA1_RS03075 (PALA1_00611) | 643841..644071 | - | 231 | WP_019725803.1 | hypothetical protein | - |
| PALA1_RS03080 (PALA1_00612) | 644169..644408 | + | 240 | WP_019725804.1 | helix-turn-helix transcriptional regulator | - |
| PALA1_RS03085 | 644623..644844 | - | 222 | WP_224786703.1 | hypothetical protein | - |
| PALA1_RS03090 | 644953..645375 | + | 423 | Protein_616 | tyrosine-type recombinase/integrase | - |
| PALA1_RS03100 (PALA1_00614) | 645633..649370 | - | 3738 | WP_023100780.1 | hypothetical protein | VF |
| PALA1_RS03105 (PALA1_00615) | 649477..651330 | - | 1854 | WP_003085035.1 | RNA polymerase sigma factor RpoD | - |
| PALA1_RS03110 (PALA1_00616) | 651410..653404 | - | 1995 | WP_003121834.1 | DNA primase | - |
| PALA1_RS03115 (PALA1_00617) | 653487..653936 | - | 450 | WP_003085042.1 | hypothetical protein | VF |
| PALA1_RS03120 (PALA1_00618) | 654006..654221 | - | 216 | WP_003085057.1 | 30S ribosomal protein S21 | - |
| PALA1_RS03125 (PALA1_00619) | 654422..655447 | + | 1026 | WP_003109020.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| PALA1_RS03130 (PALA1_00620) | 655526..656095 | - | 570 | WP_003085061.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| PALA1_RS03135 (PALA1_00621) | 656179..656532 | + | 354 | WP_003099587.1 | dihydroneopterin aldolase | - |
| PALA1_RS03140 (PALA1_00622) | 656523..657065 | + | 543 | WP_003137363.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| PALA1_RS03145 (PALA1_00623) | 657038..658270 | - | 1233 | WP_003117955.1 | multifunctional CCA addition/repair protein | - |
| PALA1_RS03150 (PALA1_00624) | 658314..658820 | - | 507 | WP_021263065.1 | DUF4136 domain-containing protein | - |
| PALA1_RS03155 (PALA1_00625) | 658915..660468 | - | 1554 | WP_003085073.1 | SpoVR family protein | - |
| PALA1_RS03160 (PALA1_00626) | 660465..661736 | - | 1272 | WP_003099579.1 | YeaH/YhbH family protein | - |
| PALA1_RS03165 (PALA1_00627) | 661837..663759 | - | 1923 | WP_003085078.1 | PrkA family serine protein kinase | - |
| PALA1_RS03170 (PALA1_00628) | 664038..664370 | - | 333 | WP_003099577.1 | thiosulfate sulfurtransferase GlpE | - |
| PALA1_RS03175 (PALA1_00629) | 664414..665265 | - | 852 | WP_003113213.1 | symmetrical bis(5'-nucleosyl)-tetraphosphatase | - |
| PALA1_RS03180 (PALA1_00630) | 665265..665645 | - | 381 | WP_021263064.1 | Co2+/Mg2+ efflux protein ApaG | - |
| PALA1_RS03185 (PALA1_00631) | 665682..666488 | - | 807 | WP_003099569.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| PALA1_RS03190 (PALA1_00632) | 666604..667590 | - | 987 | WP_021263063.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| PALA1_RS03195 (PALA1_00633) | 667587..668879 | - | 1293 | WP_003109024.1 | peptidylprolyl isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|