MGE detailed information
MGE type: Mobilizable plasmid MGE length: 48623 bp
Accession: NZ_CP104124 Location: 1..48623 Organism: Escherichia coli strain USDA-ARS-USMARC-49610 Replicon: plasmid pEC1-49610
Accession: NZ_CP104124 Location: 1..48623 Organism: Escherichia coli strain USDA-ARS-USMARC-49610 Replicon: plasmid pEC1-49610
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N1705_RS22795 (N1705_22795) | 1294..1950 | + | 657 | WP_012579084.1 | Pentapeptide repeat protein | ARG |
| N1705_RS22800 (N1705_22800) | 2210..3076 | + | 867 | WP_001931474.1 | PSE family carbenicillin-hydrolyzing class A beta-lactamase CARB-2 | - |
| N1705_RS22805 (N1705_22805) | 3194..4032 | + | 839 | Protein_3 | Streptomycin 3''-adenylyltransferase | ARG |
| N1705_RS22810 (N1705_22810) | 4149..4496 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| N1705_RS22815 (N1705_22815) | 4490..5329 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| N1705_RS22820 (N1705_22820) | 5457..5660 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| N1705_RS22825 (N1705_22825) | 5816..7021 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| N1705_RS22830 (N1705_22830) | 7032..7337 | + | 306 | WP_000130000.1 | Transcriptional regulator | Relaxase |
| N1705_RS22835 (N1705_22835) | 7381..7446 | + | 66 | Protein_9 | EAL domain-containing protein | - |
| N1705_RS22840 (N1705_22840) | 7564..8328 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| N1705_RS22845 (N1705_22845) | 8821..9405 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| N1705_RS22850 (N1705_22850) | 9405..10643 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| N1705_RS22855 (N1705_22855) | 10640..11545 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| N1705_RS22860 (N1705_22860) | 11667..12098 | - | 432 | Protein_14 | IS6 family transposase IS26 | Transposase |
| N1705_RS22865 (N1705_22865) | 12215..12403 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| N1705_RS22870 (N1705_22870) | 12413..13612 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| N1705_RS22875 (N1705_22875) | 13784..14049 | - | 266 | Protein_17 | IS6 family transposase IS26 | Transposase |
| N1705_RS22880 (N1705_22880) | 14130..14546 | - | 417 | WP_000754566.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N1705_RS22885 (N1705_22885) | 14543..14773 | - | 231 | WP_023300761.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N1705_RS22890 (N1705_22890) | 15383..15676 | + | 294 | WP_020956883.1 | hypothetical protein | - |
| N1705_RS22895 (N1705_22895) | 15740..16426 | + | 687 | WP_020956882.1 | hypothetical protein | - |
| N1705_RS22900 (N1705_22900) | 16438..17214 | + | 777 | WP_020956881.1 | tyrosine-type recombinase/integrase | - |
| N1705_RS22905 (N1705_22905) | 17272..17529 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| N1705_RS22910 (N1705_22910) | 17658..17762 | - | 105 | WP_032409716.1 | hypothetical protein | - |
| N1705_RS22915 (N1705_22915) | 18292..19158 | + | 867 | WP_004118283.1 | replication initiation protein | - |
| N1705_RS22920 (N1705_22920) | 19335..19604 | - | 270 | WP_000339857.1 | hypothetical protein | - |
| N1705_RS22925 (N1705_22925) | 20018..21222 | + | 1205 | Protein_27 | AAA family ATPase | - |
| N1705_RS22930 (N1705_22930) | 21222..22196 | + | 975 | WP_000064120.1 | ParB family protein | - |
| N1705_RS22935 (N1705_22935) | 22278..23549 | - | 1272 | WP_004118291.1 | Y-family DNA polymerase | - |
| N1705_RS22940 (N1705_22940) | 23549..23980 | - | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N1705_RS22945 (N1705_22945) | 24386..25873 | + | 1488 | WP_023300763.1 | group II intron reverse transcriptase/maturase | - |
| N1705_RS22950 (N1705_22950) | 26025..26721 | + | 697 | Protein_32 | IS1 family transposase | - |
| N1705_RS22955 (N1705_22955) | 26731..27039 | + | 309 | Protein_33 | replication initiation protein | - |
| N1705_RS22960 (N1705_22960) | 28146..29114 | + | 969 | WP_020956880.1 | IS5 family transposase IS903B | Transposase |
| N1705_RS22965 (N1705_22965) | 29254..29640 | - | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| N1705_RS22970 (N1705_22970) | 30220..31188 | + | 969 | WP_000654802.1 | IS5 family transposase IS903B | Transposase |
| N1705_RS22975 (N1705_22975) | 31246..31329 | - | 84 | Protein_37 | SOS response-associated peptidase | - |
| N1705_RS22980 (N1705_22980) | 31990..32820 | + | 831 | Protein_38 | IS3 family transposase ISSen4 | Transposase |
| N1705_RS22985 (N1705_22985) | 32855..35821 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| N1705_RS22990 (N1705_22990) | 35907..36610 | + | 704 | Protein_40 | IS6 family transposase IS26 | Transposase |
| N1705_RS22995 (N1705_22995) | 36616..36756 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| N1705_RS23000 (N1705_23000) | 37242..37979 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| N1705_RS23005 (N1705_23005) | 37976..38200 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| N1705_RS23010 (N1705_23010) | 38411..39904 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| N1705_RS23015 (N1705_23015) | 39935..40819 | + | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| N1705_RS23020 (N1705_23020) | 41036..42250 | + | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| N1705_RS23025 (N1705_23025) | 42278..42583 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| N1705_RS23030 (N1705_23030) | 42695..42883 | + | 189 | Protein_48 | IS91 family transposase | - |
| N1705_RS23035 (N1705_23035) | 42850..44049 | - | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| N1705_RS23040 (N1705_23040) | 44155..44805 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| N1705_RS23045 (N1705_23045) | 44837..45079 | - | 243 | WP_000844627.1 | transposase | - |
| N1705_RS23050 (N1705_23050) | 45282..45755 | + | 474 | WP_000777554.1 | Dihydrofolate reductase type 1 | ARG |
| N1705_RS23055 (N1705_23055) | 46459..46806 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| N1705_RS23060 (N1705_23060) | 46800..47639 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|