MGE detailed information
MGE type: Prophage MGE length: 50298 bp
Accession: NZ_CP104123 Location: 3675806..3726103 Organism: Escherichia coli strain USDA-ARS-USMARC-49610 Replicon: chromosome
Accession: NZ_CP104123 Location: 3675806..3726103 Organism: Escherichia coli strain USDA-ARS-USMARC-49610 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N1705_RS17635 (3671835) | 3671835..3672392 | - | 558 | WP_000864668.1 | polysaccharide biosynthesis/export family protein | - |
| N1705_RS17640 (3672394) | 3672394..3673680 | - | 1287 | WP_001220593.1 | outer membrane beta-barrel protein | - |
| N1705_RS17645 (3673670) | 3673670..3675085 | - | 1416 | WP_001332875.1 | undecaprenyl-phosphate glucose phosphotransferase | - |
| N1705_RS17650 (3675402) | 3675402..3676099 | + | 698 | WP_225103636.1 | IS1 family transposase | - |
| N1705_RS17655 (3676236) | 3676236..3676487 | - | 252 | WP_196613384.1 | hypothetical protein | - |
| N1705_RS17660 (3676456) | 3676456..3677436 | - | 981 | WP_001082070.1 | SMEK domain-containing protein | - |
| N1705_RS17665 (3677889) | 3677889..3678254 | - | 366 | WP_072003801.1 | TA system toxin CbtA family protein | Toxin Detail |
| N1705_RS17670 (3678275) | 3678275..3678592 | - | 318 | WP_032250315.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| N1705_RS17675 (3678611) | 3678611..3678832 | - | 222 | Protein_3460 | DUF987 domain-containing protein | - |
| N1705_RS17680 (3678841) | 3678841..3679323 | - | 483 | WP_032250314.1 | DNA repair protein RadC | - |
| N1705_RS17685 (3679332) | 3679332..3679790 | - | 459 | WP_032250313.1 | antirestriction protein | - |
| N1705_RS17690 (3679893) | 3679893..3680057 | - | 165 | Protein_3463 | DUF905 domain-containing protein | - |
| N1705_RS17695 (3680391) | 3680391..3682055 | - | 1665 | WP_032250311.1 | ATP-dependent helicase | - |
| N1705_RS17700 (3682052) | 3682052..3683956 | - | 1905 | WP_032250310.1 | AAA family ATPase | - |
| N1705_RS17705 (3685085) | 3685085..3685552 | - | 468 | WP_032250309.1 | protein YfjT | - |
| N1705_RS17710 (3685576) | 3685576..3686019 | - | 444 | WP_032250308.1 | hypothetical protein | - |
| N1705_RS17715 (3686019) | 3686019..3686255 | - | 237 | WP_001115854.1 | protein YpjK | - |
| N1705_RS17720 (3686292) | 3686292..3686993 | - | 702 | WP_000189410.1 | WYL domain-containing protein | - |
| N1705_RS17725 (3687210) | 3687210..3688031 | - | 822 | WP_000197394.1 | DUF932 domain-containing protein | - |
| N1705_RS17730 (3688123) | 3688123..3688986 | - | 864 | WP_001567943.1 | GTPase family protein | - |
| N1705_RS17735 (3689085) | 3689085..3690251 | - | 1167 | WP_053263806.1 | hypothetical protein | - |
| N1705_RS17740 (3690744) | 3690744..3691319 | + | 576 | WP_032250306.1 | inovirus-type Gp2 protein | - |
| N1705_RS17745 (3691462) | 3691462..3691668 | + | 207 | WP_032250305.1 | AlpA family phage regulatory protein | - |
| N1705_RS17750 (3691856) | 3691856..3692827 | - | 972 | WP_089615801.1 | toll/interleukin-1 receptor domain-containing protein | - |
| N1705_RS17755 (3693053) | 3693053..3696466 | + | 3414 | WP_032250302.1 | DEAD/DEAH box helicase family protein | - |
| N1705_RS17760 (3696530) | 3696530..3698164 | + | 1635 | WP_032250300.1 | class I SAM-dependent DNA methyltransferase | - |
| N1705_RS17765 (3698161) | 3698161..3699333 | + | 1173 | WP_032250633.1 | restriction endonuclease subunit S | - |
| N1705_RS17770 (3699377) | 3699377..3700966 | - | 1590 | WP_032250632.1 | SIR2 family protein | - |
| N1705_RS17775 (3701187) | 3701187..3702152 | + | 966 | WP_032250630.1 | 5'-nucleotidase | - |
| N1705_RS17780 (3702201) | 3702201..3703415 | - | 1215 | WP_032250628.1 | Prophage integrase IntS ; Integrase | Integrase |
| N1705_RS17785 (3704074) | 3704074..3705417 | - | 1344 | WP_260248548.1 | hypothetical protein | - |
| N1705_RS17790 (3705621) | 3705621..3706783 | + | 1163 | WP_113706132.1 | IS3 family transposase ISEc17 | Transposase |
| N1705_RS17795 (3707198) | 3707198..3707752 | - | 555 | WP_260248549.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| N1705_RS17800 (3708186) | 3708186..3708617 | + | 432 | WP_260248550.1 | tail fiber assembly protein | - |
| N1705_RS17805 (3708598) | 3708598..3708984 | - | 387 | WP_260248551.1 | tail fiber assembly protein | - |
| N1705_RS17810 (3709422) | 3709422..3709724 | - | 303 | Protein_3487 | hypothetical protein | - |
| N1705_RS17815 (3709728) | 3709728..3710312 | - | 585 | WP_000383549.1 | YmfQ family protein | - |
| N1705_RS17820 (3710303) | 3710303..3711361 | - | 1059 | WP_047400085.1 | baseplate J/gp47 family protein | - |
| N1705_RS17825 (3711348) | 3711348..3711773 | - | 426 | WP_000424732.1 | phage GP46 family protein | - |
| N1705_RS17830 (3711773) | 3711773..3712321 | - | 549 | WP_001522208.1 | phage baseplate assembly protein V | - |
| N1705_RS17835 (3712321) | 3712321..3713400 | - | 1080 | WP_000999510.1 | baseplate protein | - |
| N1705_RS17840 (3713397) | 3713397..3714725 | - | 1329 | WP_260248552.1 | DNA circularization N-terminal domain-containing protein | - |
| N1705_RS17845 (3714787) | 3714787..3715317 | - | 531 | WP_000679479.1 | hypothetical protein | - |
| N1705_RS17850 (3715409) | 3715409..3716311 | - | 903 | Protein_3495 | phage tail tape measure protein | - |
| N1705_RS17855 (3716306) | 3716306..3716971 | - | 666 | Protein_3496 | antitermination protein | - |
| N1705_RS17860 (3716985) | 3716985..3717974 | - | 990 | WP_001439745.1 | DUF968 domain-containing protein | - |
| N1705_RS17865 (3717982) | 3717982..3718287 | - | 306 | Protein_3498 | KilA-N domain-containing protein | - |
| N1705_RS17870 (3718308) | 3718308..3718952 | - | 645 | Protein_3499 | helix-turn-helix domain-containing protein | - |
| N1705_RS17875 (3718942) | 3718942..3719121 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| N1705_RS17880 (3719297) | 3719297..3719848 | - | 552 | WP_001434539.1 | protein YmfL | - |
| N1705_RS17885 (3719886) | 3719886..3720086 | - | 201 | WP_000205494.1 | Cro/CI family transcriptional regulator | - |
| N1705_RS17890 (3720184) | 3720184..3720810 | + | 627 | WP_000450735.1 | LexA family transcriptional regulator | - |
| N1705_RS17895 (3721058) | 3721058..3721264 | + | 207 | WP_143370911.1 | hypothetical protein | - |
| N1705_RS17900 (3721236) | 3721236..3721670 | - | 435 | WP_000016389.1 | hypothetical protein | - |
| N1705_RS17905 (3721814) | 3721814..3722124 | + | 311 | Protein_3506 | hypothetical protein | - |
| N1705_RS17910 (3722139) | 3722139..3722501 | + | 363 | WP_000135682.1 | protein YfdP | - |
| N1705_RS17915 (3722567) | 3722567..3723391 | + | 825 | WP_260248553.1 | YfdQ family protein | - |
| N1705_RS17920 (3723519) | 3723519..3724055 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| N1705_RS17925 (3724046) | 3724046..3724408 | + | 363 | WP_001242749.1 | phage protein | - |
| N1705_RS17930 (3724408) | 3724408..3724713 | + | 306 | WP_115437755.1 | protein YfdT | - |
| N1705_RS17935 (3724629) | 3724629..3725063 | + | 435 | WP_122988870.1 | helix-turn-helix domain-containing protein | - |
| N1705_RS17940 (3724985) | 3724985..3726103 | + | 1119 | WP_250115209.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| N1705_RS17950 (3726308) | 3726308..3727561 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| N1705_RS17955 (3727573) | 3727573..3728676 | - | 1104 | WP_219411880.1 | glutamate 5-kinase | - |
| N1705_RS17960 (3728964) | 3728964..3730019 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| N1705_RS17965 (3730058) | 3730058..3730459 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|