MGE detailed information
MGE type: Conjugative plasmid MGE length: 93173 bp
Accession: NZ_CP104082 Location: 1..93173 Organism: Escherichia coli strain HB42 Replicon: plasmid pHB42-5
Accession: NZ_CP104082 Location: 1..93173 Organism: Escherichia coli strain HB42 Replicon: plasmid pHB42-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0M81_RS24640 (N0M81_24640) | 276..1148 | + | 873 | WP_045145554.1 | incFII family plasmid replication initiator RepA | - |
| N0M81_RS24645 (N0M81_24645) | 1841..2008 | + | 168 | WP_045145553.1 | hypothetical protein | - |
| N0M81_RS24650 (N0M81_24650) | 2095..2346 | + | 252 | WP_045145550.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N0M81_RS24655 (N0M81_24655) | 2343..2630 | + | 288 | WP_032353555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N0M81_RS24660 (N0M81_24660) | 2842..4041 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| N0M81_RS24665 (N0M81_24665) | 4051..4239 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| N0M81_RS24670 (N0M81_24670) | 4354..4665 | - | 312 | Protein_6 | colicin-B | - |
| N0M81_RS24675 (N0M81_24675) | 4851..5339 | + | 489 | Protein_7 | IS91 family transposase ISSod25 | Transposase |
| N0M81_RS24680 (N0M81_24680) | 5476..5751 | - | 276 | WP_001536593.1 | hypothetical protein | - |
| N0M81_RS24685 (N0M81_24685) | 5745..6389 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| N0M81_RS24690 (N0M81_24690) | 6618..7589 | + | 972 | WP_021580010.1 | plasmid segregation protein ParM | - |
| N0M81_RS24695 (N0M81_24695) | 7594..7986 | + | 393 | WP_000340830.1 | plasmid partitioning/stability family protein | - |
| N0M81_RS24700 (N0M81_24700) | 7991..9262 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| N0M81_RS24705 (N0M81_24705) | 9262..9699 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N0M81_RS24710 (N0M81_24710) | 9696..9944 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| N0M81_RS24715 (N0M81_24715) | 10362..11264 | + | 903 | WP_123891605.1 | DUF1281 domain-containing protein | - |
| N0M81_RS24720 (N0M81_24720) | 11228..11323 | + | 96 | Protein_16 | hypothetical protein | - |
| N0M81_RS24725 (N0M81_24725) | 11670..12095 | + | 426 | WP_045148058.1 | antirestriction protein | - |
| N0M81_RS24730 (N0M81_24730) | 12142..12561 | + | 420 | WP_000271736.1 | DUF1380 family protein | - |
| N0M81_RS24735 (N0M81_24735) | 12561..12752 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| N0M81_RS24740 (N0M81_24740) | 13030..14697 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| N0M81_RS24745 (N0M81_24745) | 15428..15496 | - | 69 | Protein_21 | pilus protein | - |
| N0M81_RS24750 (N0M81_24750) | 15865..16392 | + | 528 | WP_029391983.1 | single-stranded DNA-binding protein | - |
| N0M81_RS24755 (N0M81_24755) | 16450..16683 | + | 234 | WP_021534894.1 | DUF905 domain-containing protein | - |
| N0M81_RS24760 (N0M81_24760) | 16747..18705 | + | 1959 | WP_045146531.1 | ParB/RepB/Spo0J family partition protein | - |
| N0M81_RS24765 (N0M81_24765) | 18760..19194 | + | 435 | WP_029391985.1 | conjugation system SOS inhibitor PsiB | - |
| N0M81_RS24770 (N0M81_24770) | 19191..19910 | + | 720 | WP_084818452.1 | plasmid SOS inhibition protein A | - |
| N0M81_RS24775 (N0M81_24775) | 19907..20503 | + | 597 | WP_045146526.1 | hypothetical protein | - |
| N0M81_RS24780 (N0M81_24780) | 20973..21473 | + | 501 | WP_045146524.1 | antirestriction protein ArdA | - |
| N0M81_RS24785 (N0M81_24785) | 21590..22087 | - | 498 | WP_259905021.1 | hypothetical protein | - |
| N0M81_RS24790 (N0M81_24790) | 22205..22639 | + | 435 | WP_136498728.1 | post-segregation killing protein PndC | - |
| N0M81_RS24795 (N0M81_24795) | 22732..22998 | + | 267 | WP_021580018.1 | hypothetical protein | - |
| N0M81_RS24800 (N0M81_24800) | 23063..24001 | + | 939 | WP_072643689.1 | Recombination-promoting nuclease RpnA | VF |
| N0M81_RS24805 (N0M81_24805) | 24064..24237 | + | 174 | Protein_33 | hypothetical protein | VF |
| N0M81_RS24810 (N0M81_24810) | 24376..25053 | + | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| N0M81_RS24815 (N0M81_24815) | 25053..25400 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| N0M81_RS24820 (N0M81_24820) | 25420..26991 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| N0M81_RS24825 (N0M81_24825) | 26994..27233 | + | 240 | WP_249530581.1 | hypothetical protein | - |
| N0M81_RS24830 (N0M81_24830) | 27264..27515 | - | 252 | WP_072643681.1 | helix-turn-helix transcriptional regulator | - |
| N0M81_RS24835 (N0M81_24835) | 28096..28944 | + | 849 | WP_259905023.1 | DUF4942 domain-containing protein | - |
| N0M81_RS24840 (N0M81_24840) | 29030..29365 | - | 336 | WP_000157103.1 | hypothetical protein | - |
| N0M81_RS24845 (N0M81_24845) | 29598..29930 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| N0M81_RS24850 (N0M81_24850) | 29942..32653 | + | 2712 | WP_259905024.1 | Protein TraI | Relaxase |
| N0M81_RS24855 (N0M81_24855) | 32721..32852 | + | 132 | Protein_43 | tolA family protein | - |
| N0M81_RS24860 (N0M81_24860) | 32836..33627 | + | 792 | Protein_44 | IS3 family transposase IS629 | Transposase |
| N0M81_RS24865 (N0M81_24865) | 34897..35594 | + | 698 | WP_259905025.1 | IS1 family transposase IS1R | Transposase |
| N0M81_RS24870 (N0M81_24870) | 36593..37786 | - | 1194 | Protein_46 | IS3 family transposase IS629 | Transposase |
| N0M81_RS24875 (N0M81_24875) | 38376..40679 | - | 2304 | WP_072643524.1 | F-type conjugative transfer protein TrbC | - |
| N0M81_RS24880 (N0M81_24880) | 40660..41778 | - | 1119 | WP_072643525.1 | DsbC family protein | - |
| N0M81_RS24885 (N0M81_24885) | 41775..43010 | - | 1236 | WP_244611469.1 | IncI1-type conjugal transfer protein TrbA | - |
| N0M81_RS24890 (N0M81_24890) | 43703..43879 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| N0M81_RS24895 (N0M81_24895) | 44042..44497 | - | 456 | WP_072643576.1 | thermonuclease family protein | - |
| N0M81_RS24900 (N0M81_24900) | 44662..45285 | + | 624 | WP_072643577.1 | DNA-binding protein | - |
| N0M81_RS24905 (N0M81_24905) | 45373..45828 | + | 456 | WP_072643578.1 | DUF2569 family protein | - |
| N0M81_RS24910 (N0M81_24910) | 46307..46459 | + | 153 | WP_021532728.1 | Hok/Gef family protein | - |
| N0M81_RS24915 (N0M81_24915) | 46773..47423 | - | 651 | WP_072643580.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| N0M81_RS24920 (N0M81_24920) | 47512..49677 | - | 2166 | WP_259905007.1 | DotA/TraY family protein | - |
| N0M81_RS24925 (N0M81_24925) | 49750..50319 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| N0M81_RS24930 (N0M81_24930) | 50316..51521 | - | 1206 | WP_259905010.1 | conjugal transfer protein TraW | - |
| N0M81_RS24935 (N0M81_24935) | 51479..52099 | - | 621 | WP_072643640.1 | conjugal transfer protein TraV | - |
| N0M81_RS24940 (N0M81_24940) | 52099..55143 | - | 3045 | WP_072721812.1 | conjugal transfer protein | - |
| N0M81_RS24945 (N0M81_24945) | 55319..55702 | - | 384 | WP_233336652.1 | hypothetical protein | - |
| N0M81_RS24950 (N0M81_24950) | 55699..56058 | - | 360 | WP_000379509.1 | hypothetical protein | - |
| N0M81_RS24955 (N0M81_24955) | 56126..56944 | - | 819 | WP_072721815.1 | conjugal transfer protein TraT | - |
| N0M81_RS24960 (N0M81_24960) | 56958..57110 | - | 153 | Protein_64 | TraS | - |
| N0M81_RS24965 (N0M81_24965) | 57167..57565 | - | 399 | WP_029391936.1 | hypothetical protein | - |
| N0M81_RS24970 (N0M81_24970) | 57612..58142 | - | 531 | WP_000987022.1 | conjugal transfer protein TraQ | - |
| N0M81_RS24975 (N0M81_24975) | 58139..58852 | - | 714 | WP_021532717.1 | conjugal transfer protein TraP | - |
| N0M81_RS24980 (N0M81_24980) | 58849..60180 | - | 1332 | WP_106491620.1 | conjugal transfer protein TraO | - |
| N0M81_RS24985 (N0M81_24985) | 60184..61158 | - | 975 | WP_050923626.1 | hypothetical protein | VF |
| N0M81_RS24990 (N0M81_24990) | 61169..61864 | - | 696 | WP_072657234.1 | DotI/IcmL family type IV secretion protein | - |
| N0M81_RS24995 (N0M81_24995) | 61876..62226 | - | 351 | WP_021532713.1 | hypothetical protein | - |
| N0M81_RS25000 (N0M81_25000) | 62243..66304 | - | 4062 | WP_219795302.1 | DUF5710 domain-containing protein | - |
| N0M81_RS25005 (N0M81_25005) | 66368..66658 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| N0M81_RS25010 (N0M81_25010) | 66655..67803 | - | 1149 | WP_058100838.1 | putative protein YggR | VF |
| N0M81_RS25015 (N0M81_25015) | 67787..68623 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| N0M81_RS25020 (N0M81_25020) | 68620..69078 | - | 459 | WP_045145391.1 | DotD/TraH family lipoprotein | - |
| N0M81_RS25025 (N0M81_25025) | 69182..70384 | - | 1203 | WP_077251815.1 | conjugal transfer protein TraF | - |
| N0M81_RS25030 (N0M81_25030) | 70486..71307 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| N0M81_RS25035 (N0M81_25035) | 71581..71826 | + | 246 | WP_259905015.1 | hypothetical protein | - |
| N0M81_RS25040 (N0M81_25040) | 72335..73506 | - | 1172 | Protein_80 | site-specific integrase | - |
| N0M81_RS25045 (N0M81_25045) | 73556..73753 | + | 198 | WP_225877559.1 | hypothetical protein | - |
| N0M81_RS25050 (N0M81_25050) | 73925..75298 | - | 1374 | WP_053287758.1 | hypothetical protein | VF |
| N0M81_RS25055 (N0M81_25055) | 75295..76002 | - | 708 | WP_153789788.1 | A24 family peptidase | - |
| N0M81_RS25060 (N0M81_25060) | 75962..76438 | - | 477 | WP_021532704.1 | hypothetical protein | VF |
| N0M81_RS25065 (N0M81_25065) | 76497..77033 | - | 537 | WP_021532703.1 | type 4 pilus major pilin | - |
| N0M81_RS25070 (N0M81_25070) | 77083..78183 | - | 1101 | WP_072667218.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| N0M81_RS25075 (N0M81_25075) | 78185..79693 | - | 1509 | WP_072721654.1 | Type II secretion system protein E | VF |
| N0M81_RS25080 (N0M81_25080) | 79839..81049 | - | 1211 | Protein_88 | IS4 family transposase IS10R | Transposase |
| N0M81_RS25085 (N0M81_25085) | 81220..81729 | - | 510 | WP_259905020.1 | hypothetical protein | - |
| N0M81_RS25090 (N0M81_25090) | 81939..82379 | - | 441 | WP_128999396.1 | hypothetical protein | - |
| N0M81_RS25095 (N0M81_25095) | 82428..82880 | - | 453 | WP_021532698.1 | hypothetical protein | VF |
| N0M81_RS25100 (N0M81_25100) | 82870..84165 | - | 1296 | WP_021532697.1 | type 4b pilus protein PilO2 | - |
| N0M81_RS25105 (N0M81_25105) | 84186..85805 | - | 1620 | WP_021532696.1 | Outer membrane lipoprotein BfpB | VF |
| N0M81_RS25110 (N0M81_25110) | 85836..86273 | - | 438 | WP_021532695.1 | type IV pilus biogenesis protein PilM | - |
| N0M81_RS25115 (N0M81_25115) | 86278..87348 | - | 1071 | WP_021532694.1 | hypothetical protein | VF |
| N0M81_RS25120 (N0M81_25120) | 87470..87865 | + | 396 | WP_021532693.1 | hypothetical protein | - |
| N0M81_RS25125 (N0M81_25125) | 88370..88612 | - | 243 | WP_247126311.1 | PilI type IV pilus biogenesis protein | - |
| N0M81_RS25130 (N0M81_25130) | 88693..90387 | - | 1695 | WP_072643668.1 | flotillin family protein | - |
| N0M81_RS25135 (N0M81_25135) | 90414..91034 | - | 621 | WP_032353888.1 | DUF1449 family protein | - |
| N0M81_RS25140 (N0M81_25140) | 91301..91966 | - | 666 | WP_021547664.1 | hypothetical protein | - |
| N0M81_RS25145 (N0M81_25145) | 92107..92613 | - | 507 | WP_024187405.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|