MGE detailed information
MGE type: Genomic_island MGE length: 18526 bp
Accession: NZ_CP104044 Location: 4964934..4983459 Organism: Pseudomonas sp. SD17-1 Replicon: chromosome
Accession: NZ_CP104044 Location: 4964934..4983459 Organism: Pseudomonas sp. SD17-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0B28_RS22620 (N0B28_22635) | 4960504..4963314 | + | 2811 | WP_054916544.1 | FAD-binding and (Fe-S)-binding domain-containing protein | - |
| N0B28_RS22625 (N0B28_22640) | 4963462..4963743 | + | 282 | WP_043863844.1 | hypothetical protein | - |
| N0B28_RS22635 (N0B28_22650) | 4964424..4965596 | + | 1173 | Protein_4444 | hypothetical protein ; Integrase | Integrase |
| N0B28_RS22640 (N0B28_22655) | 4965627..4968818 | - | 3192 | WP_275728913.1 | DEAD/DEAH box helicase family protein | - |
| N0B28_RS22645 (N0B28_22660) | 4968995..4969942 | - | 948 | WP_275728915.1 | GIY-YIG nuclease family protein | - |
| N0B28_RS22650 (N0B28_22665) | 4969939..4971282 | - | 1344 | WP_275728917.1 | restriction endonuclease subunit S | - |
| N0B28_RS22655 (N0B28_22670) | 4971279..4973198 | - | 1920 | WP_275728920.1 | class I SAM-dependent DNA methyltransferase | - |
| N0B28_RS22660 (N0B28_22675) | 4973924..4974355 | + | 432 | WP_275728923.1 | hypothetical protein | - |
| N0B28_RS22665 (N0B28_22680) | 4974715..4975752 | + | 1038 | WP_043863846.1 | ABC transporter substrate-binding protein | - |
| N0B28_RS22670 (N0B28_22685) | 4975816..4976430 | - | 615 | WP_054916367.1 | XRE family transcriptional regulator | - |
| N0B28_RS22675 (N0B28_22690) | 4976611..4977747 | + | 1137 | WP_275728928.1 | FAD-dependent oxidoreductase | - |
| N0B28_RS22680 (N0B28_22695) | 4977776..4978156 | + | 381 | WP_058540570.1 | RidA family protein | - |
| N0B28_RS22685 (N0B28_22700) | 4978253..4979308 | + | 1056 | WP_043863850.1 | membrane protein | - |
| N0B28_RS22690 (N0B28_22705) | 4979427..4980206 | + | 780 | WP_100634089.1 | class I SAM-dependent methyltransferase | - |
| N0B28_RS22695 (N0B28_22710) | 4980496..4982787 | + | 2292 | WP_275728934.1 | autotransporter domain-containing protein | - |
| N0B28_RS22700 (N0B28_22715) | 4982870..4983211 | - | 342 | WP_043863853.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| N0B28_RS22705 (N0B28_22720) | 4983211..4983459 | - | 249 | WP_078481358.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| N0B28_RS22710 (N0B28_22725) | 4983704..4984714 | - | 1011 | WP_275728940.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| N0B28_RS22715 (N0B28_22730) | 4984856..4985356 | + | 501 | WP_043863856.1 | sigma-70 family RNA polymerase sigma factor | - |
| N0B28_RS22720 (N0B28_22735) | 4985358..4986305 | + | 948 | WP_275728944.1 | FecR domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|