MGE detailed information
MGE type: Genomic_island MGE length: 12379 bp
Accession: NZ_CP104044 Location: 291349..303727 Organism: Pseudomonas sp. SD17-1 Replicon: chromosome
Accession: NZ_CP104044 Location: 291349..303727 Organism: Pseudomonas sp. SD17-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0B28_RS01315 (N0B28_01315) | 286795..288174 | - | 1380 | WP_100632945.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| N0B28_RS01320 (N0B28_01320) | 288554..289372 | - | 819 | WP_054915940.1 | AraC family transcriptional regulator | - |
| N0B28_RS01325 (N0B28_01325) | 289419..290036 | - | 618 | WP_275729953.1 | LysE family transporter | - |
| N0B28_RS01330 (N0B28_01330) | 290487..290783 | + | 297 | WP_153046062.1 | DUF3077 domain-containing protein | - |
| N0B28_RS01335 (N0B28_01335) | 290858..291205 | + | 348 | WP_253086509.1 | hypothetical protein | - |
| N0B28_RS01340 (N0B28_01340) | 291349..291846 | - | 498 | WP_043859806.1 | SMI1/KNR4 family protein | - |
| N0B28_RS01345 (N0B28_01345) | 292028..292855 | + | 828 | WP_043859807.1 | DUF2314 domain-containing protein | - |
| N0B28_RS01350 (N0B28_01350) | 293290..293577 | - | 288 | WP_043859808.1 | HigA family addiction module antitoxin | - |
| N0B28_RS01355 (N0B28_01355) | 293590..293868 | - | 279 | WP_043859809.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N0B28_RS01360 (N0B28_01360) | 294779..295744 | + | 966 | WP_275729960.1 | hypothetical protein | - |
| N0B28_RS01365 (N0B28_01365) | 295792..296340 | - | 549 | Protein_265 | hypothetical protein | - |
| N0B28_RS01370 (N0B28_01370) | 296500..296682 | + | 183 | WP_213606734.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| N0B28_RS01375 (N0B28_01375) | 296712..297137 | + | 426 | WP_213606736.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| N0B28_RS01385 (N0B28_01385) | 297414..297677 | - | 264 | WP_054915796.1 | hypothetical protein | - |
| N0B28_RS01390 (N0B28_01390) | 297716..298096 | - | 381 | WP_043862226.1 | hypothetical protein | - |
| N0B28_RS01395 (N0B28_01395) | 298114..298320 | - | 207 | WP_043862225.1 | helix-turn-helix transcriptional regulator | - |
| N0B28_RS01400 (N0B28_01400) | 298330..298908 | - | 579 | WP_043862224.1 | hypothetical protein | - |
| N0B28_RS01405 (N0B28_01405) | 299430..299789 | + | 360 | WP_210013913.1 | SMR family transporter | - |
| N0B28_RS01410 (N0B28_01410) | 299783..300112 | + | 330 | WP_043862222.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| N0B28_RS01415 (N0B28_01415) | 300340..301548 | - | 1209 | WP_275729969.1 | methyltransferase | - |
| N0B28_RS01420 (N0B28_01420) | 301529..302218 | - | 690 | WP_043862220.1 | ABC transporter permease | - |
| N0B28_RS01425 (N0B28_01425) | 302215..302910 | - | 696 | WP_043862219.1 | ABC transporter permease | - |
| N0B28_RS01430 (N0B28_01430) | 302966..303727 | - | 762 | WP_043862218.1 | ABC transporter substrate-binding protein | - |
| N0B28_RS01435 (N0B28_01435) | 303741..304514 | - | 774 | WP_054915791.1 | ABC transporter ATP-binding protein | - |
| N0B28_RS01440 (N0B28_01440) | 304828..305262 | - | 435 | WP_043862216.1 | hypothetical protein | - |
| N0B28_RS01445 (N0B28_01445) | 305362..305772 | - | 411 | WP_054915790.1 | hypothetical protein | - |
| N0B28_RS01455 (N0B28_01455) | 306056..306328 | - | 273 | WP_043862214.1 | oxidative damage protection protein | - |
| N0B28_RS01460 (N0B28_01460) | 306325..307392 | - | 1068 | WP_274096610.1 | A/G-specific adenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|