MGE detailed information
MGE type: Prophage MGE length: 36948 bp
Accession: NZ_CP103974 Location: 3857909..3894856 Organism: Escherichia coli strain DLI.6n Replicon: chromosome
Accession: NZ_CP103974 Location: 3857909..3894856 Organism: Escherichia coli strain DLI.6n Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NZ657_RS18805 (3853166) | 3853166..3854122 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| NZ657_RS18810 (3854173) | 3854173..3854511 | + | 339 | Protein_3680 | LysR substrate-binding domain-containing protein | - |
| NZ657_RS18815 (3854855) | 3854855..3855214 | + | 360 | WP_001350215.1 | hypothetical protein | - |
| NZ657_RS18820 (3855207) | 3855207..3855749 | - | 543 | WP_000284450.1 | plasmid pRiA4b ORF-3 family protein | - |
| NZ657_RS18825 (3855870) | 3855870..3856055 | - | 186 | WP_000188903.1 | hypothetical protein | - |
| NZ657_RS18830 (3856353) | 3856353..3856634 | - | 282 | WP_001554736.1 | PerC family transcriptional regulator | - |
| NZ657_RS18835 (3856906) | 3856906..3857349 | + | 444 | WP_024174049.1 | hypothetical protein | - |
| NZ657_RS18840 (3857429) | 3857429..3857650 | + | 222 | WP_000678608.1 | hypothetical protein | - |
| NZ657_RS18850 (3859345) | 3859345..3860916 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| NZ657_RS18855 (3860936) | 3860936..3861283 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| NZ657_RS18860 (3861283) | 3861283..3861960 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| NZ657_RS18865 (3862223) | 3862223..3862921 | - | 699 | WP_000594596.1 | hypothetical protein | - |
| NZ657_RS18870 (3863072) | 3863072..3865792 | - | 2721 | WP_252333534.1 | lytic transglycosylase domain-containing protein | - |
| NZ657_RS18875 (3865789) | 3865789..3867075 | - | 1287 | WP_225104747.1 | phage DNA ejection protein | - |
| NZ657_RS18880 (3867108) | 3867108..3867785 | - | 678 | WP_000909176.1 | hypothetical protein | - |
| NZ657_RS18885 (3867779) | 3867779..3868240 | - | 462 | WP_000420674.1 | DUF2824 family protein | - |
| NZ657_RS18890 (3868257) | 3868257..3868418 | - | 162 | WP_001018524.1 | hypothetical protein | - |
| NZ657_RS18895 (3869003) | 3869003..3869530 | - | 528 | Protein_3697 | hypothetical protein | - |
| NZ657_RS18900 (3869586) | 3869586..3870799 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| NZ657_RS18905 (3870838) | 3870838..3873072 | - | 2235 | Protein_3699 | DUF927 domain-containing protein | - |
| NZ657_RS18910 (3873059) | 3873059..3873430 | - | 372 | WP_001673421.1 | hypothetical protein | - |
| NZ657_RS18915 (3873423) | 3873423..3873764 | - | 342 | WP_000628964.1 | hypothetical protein | - |
| NZ657_RS18920 (3873775) | 3873775..3874377 | - | 603 | WP_001673420.1 | hypothetical protein | - |
| NZ657_RS18925 (3874370) | 3874370..3874591 | - | 222 | WP_000181940.1 | hypothetical protein | - |
| NZ657_RS18930 (3874588) | 3874588..3874851 | - | 264 | WP_001024675.1 | hypothetical protein | - |
| NZ657_RS18935 (3874848) | 3874848..3875042 | - | 195 | WP_001065738.1 | hypothetical protein | - |
| NZ657_RS18940 (3875246) | 3875246..3875440 | - | 195 | WP_001377265.1 | host cell division inhibitor Icd-like protein | - |
| NZ657_RS18945 (3875467) | 3875467..3875775 | - | 309 | Protein_3707 | ash family protein | - |
| NZ657_RS18950 (3876057) | 3876057..3876239 | - | 183 | WP_000476150.1 | DUF4222 domain-containing protein | - |
| NZ657_RS18955 (3876232) | 3876232..3877065 | - | 834 | WP_001673419.1 | antA/AntB antirepressor family protein | - |
| NZ657_RS18960 (3877078) | 3877078..3877509 | - | 432 | WP_000412538.1 | hypothetical protein | - |
| NZ657_RS18965 (3877509) | 3877509..3877712 | - | 204 | WP_252333440.1 | AlpA family transcriptional regulator | - |
| NZ657_RS18970 (3878141) | 3878141..3879355 | - | 1215 | WP_001554730.1 | Prophage integrase IntS ; Integrase | Integrase |
| NZ657_RS18980 (3879711) | 3879711..3880964 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NZ657_RS18985 (3880976) | 3880976..3882079 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NZ657_RS18990 (3882367) | 3882367..3883422 | + | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| NZ657_RS18995 (3883461) | 3883461..3883862 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3884580) | 3884580..3884660 | - | 81 | NuclAT_12 | - | - |
| - (3884580) | 3884580..3884660 | - | 81 | NuclAT_12 | - | - |
| - (3884580) | 3884580..3884660 | - | 81 | NuclAT_12 | - | - |
| - (3884580) | 3884580..3884660 | - | 81 | NuclAT_12 | - | - |
| NZ657_RS19000 (3883920) | 3883920..3885164 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| NZ657_RS19005 (3885256) | 3885256..3885714 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| NZ657_RS19010 (3885975) | 3885975..3887432 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| NZ657_RS19015 (3887489) | 3887489..3888010 | - | 522 | Protein_3720 | peptide chain release factor H | - |
| NZ657_RS19020 (3888006) | 3888006..3888212 | - | 207 | Protein_3721 | RtcB family protein | - |
| NZ657_RS19025 (3888530) | 3888530..3888982 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| NZ657_RS19030 (3888992) | 3888992..3889390 | - | 399 | WP_001263488.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| NZ657_RS19035 (3889393) | 3889393..3889686 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| NZ657_RS19040 (3889738) | 3889738..3890793 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| NZ657_RS19045 (3890864) | 3890864..3891649 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| NZ657_RS19050 (3891621) | 3891621..3893333 | + | 1713 | Protein_3727 | Flagellar biosynthesis protein FlhA | VF |
| NZ657_RS19055 (3893557) | 3893557..3894054 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| NZ657_RS19060 (3894230) | 3894230..3894979 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| NZ657_RS19065 (3895189) | 3895189..3895449 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| NZ657_RS19070 (3895452) | 3895452..3895730 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| NZ657_RS19075 (3895886) | 3895886..3896626 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| NZ657_RS19080 (3896597) | 3896597..3897364 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| NZ657_RS19085 (3897570) | 3897570..3898148 | - | 579 | WP_077487565.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|