MGE detailed information
MGE type: Prophage MGE length: 38369 bp
Accession: NZ_CP103972 Location: 3831136..3869504 Organism: Escherichia coli strain DLI.5a Replicon: chromosome
Accession: NZ_CP103972 Location: 3831136..3869504 Organism: Escherichia coli strain DLI.5a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NZD79_RS18625 (3827844) | 3827844..3828422 | + | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| NZD79_RS18630 (3828628) | 3828628..3829395 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| NZD79_RS18635 (3829366) | 3829366..3830106 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| NZD79_RS18640 (3830262) | 3830262..3830540 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| NZD79_RS18645 (3830543) | 3830543..3830803 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| NZD79_RS18650 (3831013) | 3831013..3831762 | + | 750 | WP_053274822.1 | hypothetical protein | VF |
| NZD79_RS18655 (3831938) | 3831938..3832435 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| NZD79_RS18660 (3832659) | 3832659..3834371 | - | 1713 | Protein_3638 | Flagellar biosynthesis protein FlhA | VF |
| NZD79_RS18665 (3834343) | 3834343..3835128 | + | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| NZD79_RS18670 (3835199) | 3835199..3836254 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| NZD79_RS18675 (3836306) | 3836306..3836599 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| NZD79_RS18680 (3836602) | 3836602..3837000 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| NZD79_RS18685 (3837079) | 3837079..3837776 | + | 698 | WP_248783592.1 | IS1 family transposase | - |
| NZD79_RS18690 (3837778) | 3837778..3838239 | + | 462 | WP_259568154.1 | GNAT family N-acetyltransferase | - |
| NZD79_RS18695 (3838557) | 3838557..3838763 | + | 207 | Protein_3645 | RtcB family protein | - |
| NZD79_RS18700 (3838759) | 3838759..3839280 | + | 522 | Protein_3646 | peptide chain release factor H | - |
| NZD79_RS18705 (3839337) | 3839337..3840794 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| NZD79_RS18710 (3841055) | 3841055..3841513 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (3842109) | 3842109..3842189 | + | 81 | NuclAT_11 | - | - |
| - (3842109) | 3842109..3842189 | + | 81 | NuclAT_11 | - | - |
| - (3842109) | 3842109..3842189 | + | 81 | NuclAT_11 | - | - |
| - (3842109) | 3842109..3842189 | + | 81 | NuclAT_11 | - | - |
| NZD79_RS18715 (3841605) | 3841605..3842849 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| NZD79_RS18720 (3842907) | 3842907..3843308 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| NZD79_RS18725 (3843347) | 3843347..3844402 | - | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| NZD79_RS18730 (3844690) | 3844690..3845793 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NZD79_RS18735 (3845805) | 3845805..3847058 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NZD79_RS18745 (3847263) | 3847263..3848381 | - | 1119 | WP_224485718.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| NZD79_RS18750 (3848303) | 3848303..3848653 | - | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| NZD79_RS18755 (3848653) | 3848653..3848958 | - | 306 | WP_072692352.1 | protein YfdT | - |
| NZD79_RS18760 (3848958) | 3848958..3849320 | - | 363 | WP_001242749.1 | phage protein | - |
| NZD79_RS18765 (3849311) | 3849311..3849847 | - | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| NZD79_RS18770 (3849975) | 3849975..3850799 | - | 825 | WP_000081287.1 | DUF2303 family protein | - |
| NZD79_RS18775 (3850865) | 3850865..3851227 | - | 363 | WP_000135682.1 | protein YfdP | - |
| NZD79_RS18780 (3851242) | 3851242..3851552 | - | 311 | Protein_3661 | hypothetical protein | - |
| NZD79_RS18785 (3851828) | 3851828..3852103 | - | 276 | WP_021563905.1 | hypothetical protein | - |
| NZD79_RS18790 (3852297) | 3852297..3852971 | - | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| NZD79_RS18795 (3853062) | 3853062..3853244 | + | 183 | Protein_3664 | helix-turn-helix domain-containing protein | - |
| NZD79_RS18800 (3853245) | 3853245..3853526 | + | 282 | Protein_3665 | phage major capsid protein | - |
| NZD79_RS18805 (3853576) | 3853576..3853776 | + | 201 | WP_000601360.1 | hypothetical protein | - |
| NZD79_RS18810 (3853779) | 3853779..3854102 | + | 324 | WP_000927711.1 | head-tail connector protein | - |
| NZD79_RS18815 (3854099) | 3854099..3854509 | + | 411 | WP_000702402.1 | phage head closure protein | - |
| NZD79_RS18820 (3854484) | 3854484..3854990 | + | 507 | WP_000213502.1 | hypothetical protein | - |
| NZD79_RS18825 (3854987) | 3854987..3855547 | + | 561 | WP_023565531.1 | hypothetical protein | - |
| NZD79_RS18830 (3855556) | 3855556..3855726 | + | 171 | WP_000497758.1 | DUF2635 domain-containing protein | - |
| NZD79_RS18835 (3855710) | 3855710..3857206 | + | 1497 | WP_023565532.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| NZD79_RS18840 (3857206) | 3857206..3857562 | + | 357 | WP_000090998.1 | phage tail tube protein | - |
| NZD79_RS18845 (3857562) | 3857562..3857831 | + | 270 | WP_000661054.1 | phage tail assembly protein | - |
| NZD79_RS18850 (3857973) | 3857973..3859805 | + | 1833 | WP_000807219.1 | phage tail tape measure protein | - |
| NZD79_RS18855 (3859897) | 3859897..3860427 | + | 531 | WP_000679481.1 | hypothetical protein | - |
| NZD79_RS18860 (3860489) | 3860489..3861817 | + | 1329 | WP_001355802.1 | DNA circularization N-terminal domain-containing protein | - |
| NZD79_RS18865 (3861814) | 3861814..3862893 | + | 1080 | WP_000999510.1 | baseplate protein | - |
| NZD79_RS18870 (3862893) | 3862893..3863441 | + | 549 | WP_001259088.1 | phage baseplate assembly protein V | - |
| NZD79_RS18875 (3863441) | 3863441..3863863 | + | 423 | WP_000424739.1 | phage GP46 family protein | - |
| NZD79_RS18880 (3863853) | 3863853..3864911 | + | 1059 | WP_023565535.1 | baseplate J/gp47 family protein | - |
| NZD79_RS18885 (3864902) | 3864902..3865486 | + | 585 | WP_023565536.1 | YmfQ family protein | - |
| NZD79_RS18890 (3865490) | 3865490..3865786 | + | 297 | Protein_3683 | hypothetical protein | - |
| NZD79_RS18895 (3866404) | 3866404..3866817 | + | 414 | WP_001104934.1 | hypothetical protein | - |
| NZD79_RS18900 (3866894) | 3866894..3867667 | - | 774 | WP_000355484.1 | hypothetical protein | - |
| NZD79_RS18905 (3868071) | 3868071..3869504 | + | 1434 | WP_001288444.1 | DNA cytosine methyltransferase | - |
| NZD79_RS18910 (3869539) | 3869539..3870753 | - | 1215 | WP_259568155.1 | type II restriction endonuclease | - |
| NZD79_RS18915 (3871506) | 3871506..3872855 | - | 1350 | WP_112922391.1 | hypothetical protein | - |
| NZD79_RS18920 (3873553) | 3873553..3873891 | - | 339 | Protein_3689 | LysR substrate-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|