MGE detailed information
MGE type: Genomic_island MGE length: 12997 bp
Accession: NZ_CP103972 Location: 250245..263241 Organism: Escherichia coli strain DLI.5a Replicon: chromosome
Accession: NZ_CP103972 Location: 250245..263241 Organism: Escherichia coli strain DLI.5a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NZD79_RS01170 (245465) | 245465..247837 | - | 2373 | Protein_233 | TonB-dependent receptor plug domain-containing protein | - |
| NZD79_RS01175 (247875) | 247875..249077 | - | 1203 | Protein_234 | ABC transporter ATP-binding protein/permease | - |
| NZD79_RS01180 (249224) | 249224..250204 | - | 981 | WP_000019473.1 | IS5-like element ISKpn26 family transposase | - |
| NZD79_RS01185 (250275) | 250275..250760 | - | 486 | Protein_236 | ABC transporter ATP-binding protein/permease | - |
| NZD79_RS01190 (250963) | 250963..251085 | + | 123 | WP_120795387.1 | protein YneP | - |
| NZD79_RS01195 (251051) | 251051..252208 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| NZD79_RS01200 (252260) | 252260..253323 | - | 1064 | Protein_239 | sulfatase-like hydrolase/transferase | - |
| NZD79_RS01205 (253725) | 253725..254486 | - | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| NZD79_RS01210 (254561) | 254561..254758 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| NZD79_RS01215 (255006) | 255006..257285 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| NZD79_RS01220 (257619) | 257619..258533 | - | 915 | WP_097342209.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| NZD79_RS01225 (258592) | 258592..259095 | - | 504 | WP_259568183.1 | Protein FimG | VF |
| NZD79_RS01230 (259108) | 259108..259638 | - | 531 | WP_000876763.1 | Protein FimF | VF |
| NZD79_RS01235 (259652) | 259652..260878 | - | 1227 | Protein_246 | Outer membrane usher protein FimD | VF |
| NZD79_RS01240 (261133) | 261133..261341 | - | 209 | Protein_247 | AraC family transcriptional regulator | - |
| NZD79_RS01245 (261653) | 261653..262975 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| NZD79_RS01250 (262975) | 262975..263241 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.007 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.009 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.007 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.007 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.007 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.007 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.007 |