MGE detailed information
MGE type: Prophage MGE length: 93532 bp
Accession: NZ_CP103964 Location: 1686922..1780453 Organism: Staphylococcus hyicus strain MM2101 Replicon: chromosome
Accession: NZ_CP103964 Location: 1686922..1780453 Organism: Staphylococcus hyicus strain MM2101 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NZD48_RS08065 (NZD48_08065) | 1682366..1682812 | + | 447 | WP_252539667.1 | N-acetyltransferase | - |
| NZD48_RS08070 (NZD48_08070) | 1682903..1683037 | - | 135 | WP_039646210.1 | beta-class phenol-soluble modulin | - |
| NZD48_RS08075 (NZD48_08075) | 1683859..1685163 | + | 1305 | WP_039646212.1 | potassium transporter TrkG | - |
| NZD48_RS08080 (NZD48_08080) | 1685810..1686022 | + | 213 | WP_259488763.1 | hypothetical protein | - |
| NZD48_RS08090 (NZD48_08090) | 1686568..1686720 | - | 153 | WP_259488765.1 | hypothetical protein | - |
| NZD48_RS08095 (NZD48_08095) | 1686922..1687677 | - | 756 | WP_259488767.1 | CHAP domain-containing protein | - |
| NZD48_RS08100 (NZD48_08100) | 1687690..1687944 | - | 255 | WP_060830201.1 | phage holin | - |
| NZD48_RS08105 (NZD48_08105) | 1687962..1689851 | - | 1890 | WP_065354080.1 | glucosaminidase domain-containing protein | - |
| NZD48_RS08110 (NZD48_08110) | 1689974..1690348 | - | 375 | WP_015728845.1 | hypothetical protein | - |
| NZD48_RS08115 (NZD48_08115) | 1690381..1691652 | - | 1272 | WP_037543575.1 | phage baseplate upper protein | - |
| NZD48_RS08120 (NZD48_08120) | 1691669..1692712 | - | 1044 | WP_259488773.1 | SGNH/GDSL hydrolase family protein | - |
| NZD48_RS08125 (NZD48_08125) | 1692724..1693416 | - | 693 | WP_103866906.1 | hypothetical protein | - |
| NZD48_RS08130 (NZD48_08130) | 1693420..1694817 | - | 1398 | WP_257071099.1 | phage tail protein | - |
| NZD48_RS08135 (NZD48_08135) | 1694830..1695762 | - | 933 | WP_015728840.1 | phage tail family protein | - |
| NZD48_RS08140 (NZD48_08140) | 1695775..1698894 | - | 3120 | WP_259488776.1 | phage tail protein | - |
| NZD48_RS08145 (NZD48_08145) | 1698911..1699261 | - | 351 | WP_015728838.1 | hypothetical protein | - |
| NZD48_RS08150 (NZD48_08150) | 1699291..1699671 | - | 381 | WP_015728837.1 | tail assembly chaperone | - |
| NZD48_RS08155 (NZD48_08155) | 1699731..1700384 | - | 654 | WP_015728836.1 | phage major tail protein, TP901-1 family | - |
| NZD48_RS08160 (NZD48_08160) | 1700402..1700797 | - | 396 | WP_063282647.1 | hypothetical protein | - |
| NZD48_RS08165 (NZD48_08165) | 1700809..1701159 | - | 351 | WP_065354073.1 | HK97 gp10 family phage protein | - |
| NZD48_RS08170 (NZD48_08170) | 1701461..1701793 | - | 333 | WP_015728833.1 | phage head-tail connector protein | - |
| NZD48_RS08175 (NZD48_08175) | 1701805..1702254 | - | 450 | WP_063282644.1 | Ig-like domain-containing protein | - |
| NZD48_RS08180 (NZD48_08180) | 1702343..1703254 | - | 912 | WP_259488778.1 | capsid protein | - |
| NZD48_RS08185 (NZD48_08185) | 1703273..1703881 | - | 609 | WP_259488779.1 | DUF4355 domain-containing protein | - |
| NZD48_RS08190 (NZD48_08190) | 1704034..1704228 | - | 195 | WP_037543592.1 | hypothetical protein | - |
| NZD48_RS08195 (NZD48_08195) | 1704228..1705577 | - | 1350 | WP_259488780.1 | minor capsid protein | - |
| NZD48_RS08200 (NZD48_08200) | 1705570..1707015 | - | 1446 | WP_259488781.1 | phage portal protein | - |
| NZD48_RS08205 (NZD48_08205) | 1707027..1708301 | - | 1275 | WP_259488782.1 | PBSX family phage terminase large subunit | - |
| NZD48_RS08210 (NZD48_08210) | 1708288..1708731 | - | 444 | WP_100002485.1 | terminase small subunit | - |
| NZD48_RS08215 (NZD48_08215) | 1709090..1709509 | - | 420 | WP_107400127.1 | transcriptional regulator | - |
| NZD48_RS08220 (NZD48_08220) | 1709782..1709979 | - | 198 | WP_107362145.1 | hypothetical protein | - |
| NZD48_RS08225 (NZD48_08225) | 1710030..1710329 | - | 300 | WP_259488784.1 | MazG-like family protein | - |
| NZD48_RS08230 (NZD48_08230) | 1710330..1710479 | - | 150 | WP_259488785.1 | hypothetical protein | - |
| NZD48_RS08235 (NZD48_08235) | 1710480..1710839 | - | 360 | WP_259488786.1 | thermonuclease family protein | - |
| NZD48_RS08240 (NZD48_08240) | 1710826..1711050 | - | 225 | WP_259488787.1 | hypothetical protein | - |
| NZD48_RS08245 (NZD48_08245) | 1711040..1711288 | - | 249 | WP_259488788.1 | hypothetical protein | - |
| NZD48_RS08250 (NZD48_08250) | 1711285..1711674 | - | 390 | WP_259488789.1 | YopX family protein | - |
| NZD48_RS08255 (NZD48_08255) | 1711671..1711913 | - | 243 | WP_259488790.1 | hypothetical protein | - |
| NZD48_RS08260 (NZD48_08260) | 1711910..1712308 | - | 399 | WP_259488792.1 | hypothetical protein | - |
| NZD48_RS08265 (NZD48_08265) | 1712323..1712535 | - | 213 | WP_259488793.1 | DUF3269 family protein | - |
| NZD48_RS08270 (NZD48_08270) | 1712532..1712750 | - | 219 | Protein_1596 | DUF3310 domain-containing protein | - |
| NZD48_RS08275 (NZD48_08275) | 1712755..1712949 | - | 195 | WP_259488794.1 | hypothetical protein | - |
| NZD48_RS08280 (NZD48_08280) | 1712949..1713377 | - | 429 | WP_259488795.1 | hypothetical protein | - |
| NZD48_RS08285 (NZD48_08285) | 1713379..1713687 | - | 309 | WP_259488796.1 | VRR-NUC domain-containing protein | - |
| NZD48_RS08290 (NZD48_08290) | 1713973..1716291 | - | 2319 | WP_259488797.1 | phage/plasmid primase, P4 family | - |
| NZD48_RS08295 (NZD48_08295) | 1716322..1716819 | - | 498 | WP_259488798.1 | DUF669 domain-containing protein | - |
| NZD48_RS08300 (NZD48_08300) | 1716822..1717361 | - | 540 | WP_259488799.1 | hypothetical protein | - |
| NZD48_RS08305 (NZD48_08305) | 1717368..1718705 | - | 1338 | WP_259488800.1 | DEAD/DEAH box helicase | - |
| NZD48_RS08310 (NZD48_08310) | 1718689..1719399 | - | 711 | WP_259488801.1 | AAA family ATPase | - |
| NZD48_RS08315 (NZD48_08315) | 1719399..1719884 | - | 486 | WP_259488802.1 | siphovirus Gp157 family protein | - |
| NZD48_RS08320 (NZD48_08320) | 1719877..1720053 | - | 177 | WP_259488803.1 | hypothetical protein | - |
| NZD48_RS08325 (NZD48_08325) | 1720131..1720298 | - | 168 | WP_259488804.1 | hypothetical protein | - |
| NZD48_RS08330 (NZD48_08330) | 1720292..1720504 | - | 213 | WP_107396783.1 | hypothetical protein | - |
| NZD48_RS08335 (NZD48_08335) | 1720602..1720880 | + | 279 | WP_259488806.1 | hypothetical protein | - |
| NZD48_RS08340 (NZD48_08340) | 1720861..1721025 | - | 165 | WP_259488807.1 | hypothetical protein | - |
| NZD48_RS08345 (NZD48_08345) | 1721185..1721382 | - | 198 | WP_105967178.1 | helix-turn-helix transcriptional regulator | - |
| NZD48_RS08350 (NZD48_08350) | 1721604..1721924 | + | 321 | WP_259488808.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| NZD48_RS08355 (NZD48_08355) | 1721937..1722392 | + | 456 | WP_259488809.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| NZD48_RS08360 (NZD48_08360) | 1722450..1722745 | + | 296 | Protein_1614 | TM2 domain-containing protein | - |
| NZD48_RS08365 (NZD48_08365) | 1722901..1723383 | + | 483 | WP_065520445.1 | hypothetical protein | - |
| NZD48_RS08370 (NZD48_08370) | 1723383..1723727 | + | 345 | WP_065520444.1 | DUF3969 family protein | - |
| NZD48_RS08375 (NZD48_08375) | 1724061..1724534 | + | 474 | WP_257052661.1 | hypothetical protein | - |
| NZD48_RS08380 (NZD48_08380) | 1724539..1725330 | + | 792 | WP_257052660.1 | DUF1828 domain-containing protein | - |
| NZD48_RS08385 (NZD48_08385) | 1725386..1726411 | + | 1026 | WP_259488812.1 | hypothetical protein ; Integrase | Integrase |
| NZD48_RS08390 (NZD48_08390) | 1728295..1728654 | + | 360 | WP_259488813.1 | hypothetical protein | VF |
| NZD48_RS08395 (NZD48_08395) | 1728942..1730180 | + | 1239 | WP_259488815.1 | aminoacyltransferase | - |
| NZD48_RS08400 (NZD48_08400) | 1730585..1731445 | - | 861 | WP_259488816.1 | M23 family metallopeptidase | - |
| NZD48_RS08405 (NZD48_08405) | 1731576..1731890 | + | 315 | WP_259488818.1 | hypothetical protein | - |
| NZD48_RS08410 (NZD48_08410) | 1732000..1732503 | - | 504 | WP_259490677.1 | metallophosphoesterase | - |
| NZD48_RS08415 (NZD48_08415) | 1732500..1733084 | - | 585 | WP_252539784.1 | hypothetical protein | VF |
| NZD48_RS08420 (NZD48_08420) | 1733088..1733897 | - | 810 | WP_257071479.1 | glutamate racemase | - |
| NZD48_RS08425 (NZD48_08425) | 1734137..1734982 | - | 846 | WP_107633284.1 | succinate dehydrogenase iron-sulfur subunit | - |
| NZD48_RS08430 (NZD48_08430) | 1734982..1736748 | - | 1767 | WP_039646235.1 | succinate dehydrogenase flavoprotein subunit | - |
| NZD48_RS08435 (NZD48_08435) | 1736874..1737485 | - | 612 | WP_039646237.1 | succinate dehydrogenase cytochrome b558 subunit | - |
| NZD48_RS08440 (NZD48_08440) | 1737648..1739438 | - | 1791 | WP_039647670.1 | excinuclease ABC subunit UvrC | - |
| NZD48_RS08445 (NZD48_08445) | 1739616..1739930 | - | 315 | WP_039646238.1 | thioredoxin | - |
| NZD48_RS08450 (NZD48_08450) | 1740006..1742354 | - | 2349 | WP_259488819.1 | endonuclease MutS2 | - |
| NZD48_RS08455 (NZD48_08455) | 1742384..1744093 | - | 1710 | WP_259488820.1 | DNA polymerase/3'-5' exonuclease PolX | - |
| NZD48_RS08460 (NZD48_08460) | 1744167..1744688 | - | 522 | WP_252539800.1 | CvpA family protein | - |
| NZD48_RS08465 (NZD48_08465) | 1744690..1744956 | - | 267 | WP_039646246.1 | cell division protein ZapA | - |
| NZD48_RS08470 (NZD48_08470) | 1745151..1746080 | + | 930 | WP_259488821.1 | ribonuclease HIII | - |
| NZD48_RS08475 (NZD48_08475) | 1746239..1748644 | - | 2406 | WP_259488822.1 | phenylalanine--tRNA ligase subunit beta | - |
| NZD48_RS08480 (NZD48_08480) | 1748638..1749702 | - | 1065 | WP_252539809.1 | phenylalanine--tRNA ligase subunit alpha | - |
| NZD48_RS08485 (NZD48_08485) | 1750000..1750746 | - | 747 | WP_259488823.1 | RNA methyltransferase | - |
| NZD48_RS08490 (NZD48_08490) | 1750867..1751040 | - | 174 | WP_037566118.1 | 50S ribosomal protein L32 | - |
| NZD48_RS08495 (NZD48_08495) | 1751083..1751625 | - | 543 | WP_039646257.1 | YceD family protein | - |
| NZD48_RS08500 (NZD48_08500) | 1751752..1752891 | + | 1140 | WP_259488825.1 | nucleotidyltransferase | - |
| NZD48_RS08505 (NZD48_08505) | 1753090..1753584 | - | 495 | WP_259488826.1 | hypothetical protein | VF |
| NZD48_RS08510 (NZD48_08510) | 1753577..1754128 | - | 552 | WP_039647672.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| NZD48_RS08515 (NZD48_08515) | 1754188..1754577 | + | 390 | WP_039646263.1 | hypothetical protein | - |
| NZD48_RS08520 (NZD48_08520) | 1754578..1754826 | - | 249 | WP_259488828.1 | YlbG family protein | - |
| NZD48_RS08525 (NZD48_08525) | 1754913..1755824 | + | 912 | WP_259488829.1 | glycerophosphodiester phosphodiesterase | - |
| NZD48_RS08530 (NZD48_08530) | 1755947..1756384 | - | 438 | WP_259488830.1 | YlbF family regulator | - |
| NZD48_RS08535 (NZD48_08535) | 1756377..1757450 | - | 1074 | WP_039646271.1 | CAP-associated domain-containing protein | - |
| NZD48_RS08540 (NZD48_08540) | 1757573..1758034 | - | 462 | WP_039646273.1 | DUF420 domain-containing protein | - |
| NZD48_RS08545 (NZD48_08545) | 1758059..1758970 | - | 912 | WP_259488831.1 | heme o synthase | - |
| NZD48_RS08550 (NZD48_08550) | 1759182..1760090 | + | 909 | WP_039646278.1 | heme A synthase | - |
| NZD48_RS08555 (NZD48_08555) | 1760488..1763940 | - | 3453 | WP_259488832.1 | pyruvate carboxylase | - |
| NZD48_RS08560 (NZD48_08560) | 1764207..1765427 | - | 1221 | WP_107633272.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| NZD48_RS08565 (NZD48_08565) | 1765504..1765779 | - | 276 | WP_037566083.1 | YlaN family protein | - |
| NZD48_RS08570 (NZD48_08570) | 1765915..1766397 | + | 483 | WP_167694474.1 | hypothetical protein | - |
| NZD48_RS08575 (NZD48_08575) | 1766398..1766595 | + | 198 | WP_039646288.1 | DUF2197 domain-containing protein | - |
| NZD48_RS08580 (NZD48_08580) | 1766718..1767419 | + | 702 | WP_105992440.1 | IS3 family transposase ISSau2 | Transposase |
| NZD48_RS08585 (NZD48_08585) | 1767428..1768270 | + | 843 | WP_259488835.1 | IS3 family transposase ISSau2 | Transposase |
| NZD48_RS08590 (NZD48_08590) | 1768446..1769585 | - | 1140 | WP_259488836.1 | NADH-dependent flavin oxidoreductase | - |
| NZD48_RS08595 (NZD48_08595) | 1770230..1772077 | - | 1848 | WP_039646292.1 | hypothetical protein | VF |
| NZD48_RS08600 (NZD48_08600) | 1772169..1772360 | + | 192 | WP_252541097.1 | DUF5325 family protein | - |
| NZD48_RS08605 (NZD48_08605) | 1772423..1773235 | - | 813 | WP_252539845.1 | inositol monophosphatase family protein | - |
| NZD48_RS08610 (NZD48_08610) | 1773350..1773961 | + | 612 | WP_259488839.1 | DUF1054 domain-containing protein | - |
| NZD48_RS08615 (NZD48_08615) | 1774009..1774830 | - | 822 | WP_259488840.1 | DUF4064 domain-containing protein | - |
| NZD48_RS08620 (NZD48_08620) | 1774999..1776069 | - | 1071 | WP_259488841.1 | DUF4064 domain-containing protein | - |
| NZD48_RS08625 (NZD48_08625) | 1776133..1777203 | - | 1071 | WP_259488842.1 | spermidine/putrescine ABC transporter substrate-binding protein | - |
| NZD48_RS08630 (NZD48_08630) | 1777200..1778012 | - | 813 | WP_252539858.1 | ABC transporter permease | - |
| NZD48_RS08635 (NZD48_08635) | 1778009..1778815 | - | 807 | WP_107633265.1 | ABC transporter permease | - |
| NZD48_RS08640 (NZD48_08640) | 1778802..1779902 | - | 1101 | WP_259488843.1 | hypothetical protein | VF |
| NZD48_RS08645 (NZD48_08645) | 1779914..1780453 | - | 540 | WP_039646311.1 | XRE family transcriptional regulator | - |
| NZD48_RS08650 (NZD48_08650) | 1780555..1780827 | - | 273 | WP_259490680.1 | UPF0223 family protein | - |
| NZD48_RS08655 (NZD48_08655) | 1780909..1782315 | - | 1407 | WP_252539867.1 | dihydrolipoyl dehydrogenase | - |
| NZD48_RS08660 (NZD48_08660) | 1782319..1783626 | - | 1308 | WP_259488845.1 | dihydrolipoamide acetyltransferase family protein | - |
| NZD48_RS08665 (NZD48_08665) | 1783835..1784812 | - | 978 | WP_259488847.1 | alpha-ketoacid dehydrogenase subunit beta | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|