MGE detailed information
MGE type: Genomic_island MGE length: 43559 bp
Accession: NZ_CP103891 Location: 92272..135830 Organism: Corynebacterium diphtheriae bv. mitis strain 824/20 Replicon: chromosome
Accession: NZ_CP103891 Location: 92272..135830 Organism: Corynebacterium diphtheriae bv. mitis strain 824/20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NY039_RS00470 (NY039_00470) | 87864..88472 | - | 609 | WP_014302686.1 | anti-sigma factor | - |
| NY039_RS00475 (NY039_00475) | 88469..89029 | - | 561 | WP_088290251.1 | sigma-70 family RNA polymerase sigma factor | - |
| NY039_RS00480 (NY039_00480) | 89080..89325 | - | 246 | WP_014317398.1 | hypothetical protein | - |
| NY039_RS00485 (NY039_00485) | 89556..91196 | + | 1641 | WP_014319642.1 | cytochrome c biogenesis protein DipZ | - |
| NY039_RS00490 (NY039_00490) | 91266..92030 | - | 765 | WP_052301181.1 | MerR family transcriptional regulator | - |
| NY039_RS00495 (NY039_00495) | 92094..92261 | - | 168 | WP_003850040.1 | antitoxin | - |
| NY039_RS00500 (NY039_00500) | 92272..93618 | - | 1347 | WP_196970680.1 | M20/M25/M40 family metallo-hydrolase | - |
| NY039_RS00505 (NY039_00505) | 93696..94691 | + | 996 | WP_070797953.1 | Biotin synthase | VF |
| NY039_RS00510 (NY039_00510) | 94691..94951 | + | 261 | WP_003850043.1 | hypothetical protein | - |
| NY039_RS00515 (NY039_00515) | 95091..95222 | - | 132 | WP_256878486.1 | hypothetical protein | - |
| NY039_RS00520 (NY039_00520) | 95338..96525 | + | 1188 | WP_003850044.1 | hypothetical protein | VF |
| NY039_RS00525 (NY039_00525) | 96526..97569 | + | 1044 | WP_003850045.1 | Hemin transport system permease protein HmuU | VF |
| NY039_RS00530 (NY039_00530) | 97571..98329 | + | 759 | WP_014317404.1 | Ferric enterobactin transport ATP-binding protein FepC | VF |
| NY039_RS00535 (NY039_00535) | 98419..99897 | + | 1479 | WP_072567053.1 | hypothetical protein | - |
| NY039_RS00540 (NY039_00540) | 99915..100322 | + | 408 | WP_003850048.1 | DUF1801 domain-containing protein | - |
| NY039_RS00545 (NY039_00545) | 100337..101677 | + | 1341 | WP_070795197.1 | deoxyribodipyrimidine photo-lyase | - |
| NY039_RS00550 (NY039_00550) | 101700..102119 | + | 420 | WP_014301170.1 | DUF2871 domain-containing protein | - |
| NY039_RS00555 (NY039_00555) | 102106..103173 | - | 1068 | WP_014318452.1 | inositol-3-phosphate synthase | - |
| NY039_RS00560 (NY039_00560) | 103420..104178 | - | 759 | WP_014318453.1 | VIT family protein | - |
| NY039_RS00565 (NY039_00565) | 104273..105054 | - | 782 | Protein_106 | triacylglycerol lipase | - |
| NY039_RS00570 (NY039_00570) | 105151..105729 | + | 579 | WP_014309793.1 | nitroreductase family protein | - |
| NY039_RS00575 (NY039_00575) | 105734..107473 | - | 1740 | WP_081371133.1 | putative DNA binding domain-containing protein | - |
| NY039_RS00580 (NY039_00580) | 107846..107977 | + | 132 | WP_256891106.1 | hypothetical protein | - |
| NY039_RS00585 (NY039_00585) | 108095..108268 | + | 174 | WP_241879808.1 | hypothetical protein | - |
| NY039_RS00590 (NY039_00590) | 108753..109307 | + | 555 | WP_014311158.1 | Protein YrdA | VF |
| NY039_RS00595 (NY039_00595) | 109304..110302 | - | 999 | WP_014311159.1 | ROK family protein | - |
| NY039_RS00600 (NY039_00600) | 110670..112040 | + | 1371 | WP_016830494.1 | PepSY domain-containing protein | - |
| NY039_RS00605 (NY039_00605) | 112053..113276 | + | 1224 | WP_196970678.1 | TIGR00730 family Rossman fold protein | - |
| NY039_RS00610 (NY039_00610) | 113288..114901 | + | 1614 | WP_196970677.1 | DUF885 domain-containing protein | - |
| NY039_RS00615 (NY039_00615) | 114938..115375 | + | 438 | WP_081358008.1 | MarR family transcriptional regulator | - |
| NY039_RS00620 (NY039_00620) | 115353..116405 | - | 1053 | WP_196970676.1 | AbrB family transcriptional regulator | - |
| NY039_RS00625 (NY039_00625) | 116410..116994 | - | 585 | WP_196970675.1 | hypothetical protein | - |
| NY039_RS00630 (NY039_00630) | 116993..117763 | + | 771 | WP_014316154.1 | TSUP family transporter | - |
| NY039_RS00635 (NY039_00635) | 117753..120098 | - | 2346 | WP_196970674.1 | ATP-dependent helicase HrpB | - |
| NY039_RS00640 (NY039_00640) | 120088..120459 | - | 372 | WP_047937981.1 | maltose acetyltransferase | - |
| NY039_RS00645 (NY039_00645) | 120479..121171 | + | 693 | WP_003850100.1 | alpha-ketoglutarate-dependent dioxygenase AlkB | - |
| NY039_RS00650 (NY039_00650) | 121224..121811 | + | 588 | WP_003850103.1 | DNA-3-methyladenine glycosylase I | - |
| NY039_RS00655 (NY039_00655) | 121816..122544 | + | 729 | WP_072564827.1 | putative oxidoreductase | VF |
| NY039_RS00660 (NY039_00660) | 122658..122921 | + | 264 | WP_259516798.1 | LysE family transporter | - |
| NY039_RS00665 (NY039_00665) | 122884..123078 | + | 195 | WP_259516724.1 | hypothetical protein | - |
| NY039_RS00670 (NY039_00670) | 123187..123945 | + | 759 | WP_196970671.1 | hypothetical protein | - |
| NY039_RS00675 (NY039_00675) | 124226..125074 | + | 849 | WP_259596491.1 | IS30 family transposase ISCmi3 | Transposase |
| NY039_RS00680 (NY039_00680) | 124996..125748 | + | 753 | WP_244659961.1 | IS30 family transposase ISLxx5 | Transposase |
| NY039_RS00685 (NY039_00685) | 125960..126643 | - | 684 | WP_196970670.1 | hypothetical protein | - |
| NY039_RS00690 (NY039_00690) | 127146..127382 | + | 237 | WP_003850117.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| NY039_RS00695 (NY039_00695) | 127366..127629 | + | 264 | WP_003850119.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NY039_RS00700 (NY039_00700) | 127755..128048 | + | 294 | WP_014302727.1 | RNA-binding S4 domain-containing protein | - |
| NY039_RS00705 (NY039_00705) | 128048..128872 | + | 825 | WP_014301205.1 | VOC family protein | - |
| NY039_RS00710 (NY039_00710) | 128878..129183 | + | 306 | WP_003850125.1 | MGMT family protein | - |
| NY039_RS00715 (NY039_00715) | 129193..130113 | - | 921 | WP_021335362.1 | alpha/beta hydrolase | - |
| NY039_RS00720 (NY039_00720) | 130253..130879 | + | 627 | WP_003850128.1 | hypothetical protein | - |
| NY039_RS00725 (NY039_00725) | 130887..132881 | - | 1995 | WP_196970686.1 | M13-type metalloendopeptidase | - |
| NY039_RS00730 (NY039_00730) | 132925..133557 | + | 633 | WP_196970669.1 | hypothetical protein | - |
| NY039_RS00735 (NY039_00735) | 133554..134474 | + | 921 | WP_085688798.1 | PrsW family intramembrane metalloprotease | - |
| NY039_RS00740 (NY039_00740) | 134464..135372 | + | 909 | WP_196970668.1 | ABC transporter substrate-binding protein | - |
| NY039_RS00745 (NY039_00745) | 135393..135830 | - | 438 | WP_014302733.1 | hypothetical protein | - |
| NY039_RS00750 (NY039_00750) | 136058..139483 | - | 3426 | WP_196970667.1 | arabinosyltransferase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|