MGE detailed information
MGE type: Genomic_island MGE length: 43269 bp
Accession: NZ_CP103890 Location: 987429..1030697 Organism: Corynebacterium diphtheriae bv. mitis strain 38009/20 Replicon: chromosome
Accession: NZ_CP103890 Location: 987429..1030697 Organism: Corynebacterium diphtheriae bv. mitis strain 38009/20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NY040_RS04895 (NY040_04895) | 983318..986743 | + | 3426 | WP_196970667.1 | arabinosyltransferase domain-containing protein | - |
| NY040_RS04900 (NY040_04900) | 986971..987408 | + | 438 | WP_014302733.1 | hypothetical protein | - |
| NY040_RS04905 (NY040_04905) | 987429..988337 | - | 909 | WP_196970668.1 | ABC transporter substrate-binding protein | - |
| NY040_RS04910 (NY040_04910) | 988327..989247 | - | 921 | WP_085688798.1 | PrsW family intramembrane metalloprotease | - |
| NY040_RS04915 (NY040_04915) | 989244..989876 | - | 633 | WP_196970669.1 | hypothetical protein | - |
| NY040_RS04920 (NY040_04920) | 989920..991914 | + | 1995 | WP_196970686.1 | M13-type metalloendopeptidase | - |
| NY040_RS04925 (NY040_04925) | 991922..992548 | - | 627 | WP_003850128.1 | hypothetical protein | - |
| NY040_RS04930 (NY040_04930) | 992688..993608 | + | 921 | WP_021335362.1 | alpha/beta hydrolase | - |
| NY040_RS04935 (NY040_04935) | 993618..993923 | - | 306 | WP_003850125.1 | MGMT family protein | - |
| NY040_RS04940 (NY040_04940) | 993929..994753 | - | 825 | WP_014301205.1 | VOC family protein | - |
| NY040_RS04945 (NY040_04945) | 994753..995046 | - | 294 | WP_014302727.1 | RNA-binding S4 domain-containing protein | - |
| NY040_RS04950 (NY040_04950) | 995172..995435 | - | 264 | WP_003850119.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NY040_RS04955 (NY040_04955) | 995419..995655 | - | 237 | WP_003850117.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| NY040_RS04960 (NY040_04960) | 996158..996841 | + | 684 | WP_196970670.1 | hypothetical protein | - |
| NY040_RS04965 (NY040_04965) | 997053..997805 | - | 753 | WP_244659961.1 | IS30 family transposase ISLxx5 | Transposase |
| NY040_RS04970 (NY040_04970) | 997727..998638 | - | 912 | WP_244659962.1 | IS30 family transposase ISCmi3 | Transposase |
| NY040_RS04975 (NY040_04975) | 998856..999614 | - | 759 | WP_196970671.1 | hypothetical protein | - |
| NY040_RS04980 (NY040_04980) | 999723..999917 | - | 195 | WP_259516724.1 | hypothetical protein | - |
| NY040_RS04985 (NY040_04985) | 999880..1000143 | - | 264 | WP_259516798.1 | LysE family transporter | - |
| NY040_RS04990 (NY040_04990) | 1000257..1000985 | - | 729 | WP_072564827.1 | putative oxidoreductase | VF |
| NY040_RS04995 (NY040_04995) | 1000990..1001577 | - | 588 | WP_003850103.1 | DNA-3-methyladenine glycosylase I | - |
| NY040_RS05000 (NY040_05000) | 1001630..1002322 | - | 693 | WP_003850100.1 | alpha-ketoglutarate-dependent dioxygenase AlkB | - |
| NY040_RS05005 (NY040_05005) | 1002342..1002713 | + | 372 | WP_047937981.1 | maltose acetyltransferase | - |
| NY040_RS05010 (NY040_05010) | 1002703..1005048 | + | 2346 | WP_196970674.1 | ATP-dependent helicase HrpB | - |
| NY040_RS05015 (NY040_05015) | 1005038..1005808 | - | 771 | WP_014316154.1 | TSUP family transporter | - |
| NY040_RS05020 (NY040_05020) | 1005807..1006391 | + | 585 | WP_196970675.1 | hypothetical protein | - |
| NY040_RS05025 (NY040_05025) | 1006396..1007448 | + | 1053 | WP_196970676.1 | AbrB family transcriptional regulator | - |
| NY040_RS05030 (NY040_05030) | 1007426..1007863 | - | 438 | WP_081358008.1 | MarR family transcriptional regulator | - |
| NY040_RS05035 (NY040_05035) | 1007900..1009513 | - | 1614 | WP_196970677.1 | DUF885 domain-containing protein | - |
| NY040_RS05040 (NY040_05040) | 1009525..1010748 | - | 1224 | WP_196970678.1 | TIGR00730 family Rossman fold protein | - |
| NY040_RS05045 (NY040_05045) | 1010761..1012131 | - | 1371 | WP_016830494.1 | PepSY domain-containing protein | - |
| NY040_RS05050 (NY040_05050) | 1012499..1013497 | + | 999 | WP_014311159.1 | ROK family protein | - |
| NY040_RS05055 (NY040_05055) | 1013494..1014048 | - | 555 | WP_014311158.1 | Protein YrdA | VF |
| NY040_RS05060 (NY040_05060) | 1014522..1014695 | - | 174 | WP_241879808.1 | hypothetical protein | - |
| NY040_RS05065 (NY040_05065) | 1014813..1014944 | - | 132 | WP_256891106.1 | hypothetical protein | - |
| NY040_RS05070 (NY040_05070) | 1015317..1017056 | + | 1740 | WP_081371133.1 | putative DNA binding domain-containing protein | - |
| NY040_RS05075 (NY040_05075) | 1017061..1017639 | - | 579 | WP_014309793.1 | nitroreductase family protein | - |
| NY040_RS05080 (NY040_05080) | 1017736..1018518 | + | 783 | WP_014318454.1 | triacylglycerol lipase | - |
| NY040_RS05085 (NY040_05085) | 1018613..1019371 | + | 759 | WP_014318453.1 | VIT family protein | - |
| NY040_RS05090 (NY040_05090) | 1019618..1020685 | + | 1068 | WP_014318452.1 | inositol-3-phosphate synthase | - |
| NY040_RS05095 (NY040_05095) | 1020672..1021091 | - | 420 | WP_014301170.1 | DUF2871 domain-containing protein | - |
| NY040_RS05100 (NY040_05100) | 1021114..1022454 | - | 1341 | WP_070795197.1 | deoxyribodipyrimidine photo-lyase | - |
| NY040_RS05105 (NY040_05105) | 1022469..1022876 | - | 408 | WP_003850048.1 | DUF1801 domain-containing protein | - |
| NY040_RS05110 (NY040_05110) | 1022894..1024372 | - | 1479 | WP_072567053.1 | hypothetical protein | - |
| NY040_RS05115 (NY040_05115) | 1024462..1025220 | - | 759 | WP_014317404.1 | Ferric enterobactin transport ATP-binding protein FepC | VF |
| NY040_RS05120 (NY040_05120) | 1025222..1026265 | - | 1044 | WP_003850045.1 | Hemin transport system permease protein HmuU | VF |
| NY040_RS05125 (NY040_05125) | 1026266..1027453 | - | 1188 | WP_003850044.1 | hypothetical protein | VF |
| NY040_RS05130 (NY040_05130) | 1027569..1027700 | + | 132 | WP_256878486.1 | hypothetical protein | - |
| NY040_RS05135 (NY040_05135) | 1027840..1028100 | - | 261 | WP_003850043.1 | hypothetical protein | - |
| NY040_RS05140 (NY040_05140) | 1028100..1029095 | - | 996 | WP_070797953.1 | Biotin synthase | VF |
| NY040_RS05145 (NY040_05145) | 1029173..1030519 | + | 1347 | WP_259516726.1 | M20/M25/M40 family metallo-hydrolase | - |
| NY040_RS05150 (NY040_05150) | 1030530..1030697 | + | 168 | WP_003850040.1 | antitoxin | - |
| NY040_RS05155 (NY040_05155) | 1030761..1031525 | + | 765 | WP_052301181.1 | MerR family transcriptional regulator | - |
| NY040_RS05160 (NY040_05160) | 1031595..1033235 | - | 1641 | WP_014319642.1 | cytochrome c biogenesis protein DipZ | - |
| NY040_RS05165 (NY040_05165) | 1033466..1033711 | + | 246 | WP_014317398.1 | hypothetical protein | - |
| NY040_RS05170 (NY040_05170) | 1033762..1034322 | + | 561 | WP_088290251.1 | sigma-70 family RNA polymerase sigma factor | - |
| NY040_RS05175 (NY040_05175) | 1034319..1034927 | + | 609 | WP_014302686.1 | anti-sigma factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|