MGE detailed information
MGE type: Prophage MGE length: 48728 bp
Accession: NZ_CP103890 Location: 330610..379337 Organism: Corynebacterium diphtheriae bv. mitis strain 38009/20 Replicon: chromosome
Accession: NZ_CP103890 Location: 330610..379337 Organism: Corynebacterium diphtheriae bv. mitis strain 38009/20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NY040_RS01595 (NY040_01595) | 329758..330516 | + | 759 | WP_014318828.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| NY040_RS01600 (NY040_01600) | 330610..331422 | + | 813 | WP_196970613.1 | thymidylate synthase | - |
| NY040_RS01605 (NY040_01605) | 331422..331925 | + | 504 | WP_014303129.1 | dihydrofolate reductase | - |
| NY040_RS01610 (NY040_01610) | 331946..332203 | + | 258 | WP_010934589.1 | mycoredoxin | - |
| NY040_RS01615 (NY040_01615) | 332222..332974 | - | 753 | WP_014306660.1 | precorrin-6A synthase (deacetylating) | - |
| NY040_RS01620 (NY040_01620) | 332981..333256 | - | 276 | WP_014303127.1 | hypothetical protein | - |
| NY040_RS01630 (NY040_01630) | 333832..334143 | + | 312 | WP_196970612.1 | hypothetical protein | - |
| NY040_RS01635 (NY040_01635) | 334212..334619 | + | 408 | WP_196970611.1 | hypothetical protein | - |
| NY040_RS01640 (NY040_01640) | 334694..334933 | + | 240 | WP_196970610.1 | hypothetical protein | - |
| NY040_RS01645 (NY040_01645) | 334963..335133 | + | 171 | WP_196970609.1 | hypothetical protein | - |
| NY040_RS01650 (NY040_01650) | 335130..335924 | + | 795 | WP_196970608.1 | hypothetical protein | - |
| NY040_RS01655 (NY040_01655) | 335975..336337 | - | 363 | WP_196970607.1 | hypothetical protein | - |
| NY040_RS01660 (NY040_01660) | 336321..336758 | - | 438 | WP_088263236.1 | hypothetical protein | - |
| NY040_RS01665 (NY040_01665) | 336764..337126 | - | 363 | WP_088263237.1 | hypothetical protein | - |
| NY040_RS01670 (NY040_01670) | 337129..338592 | - | 1464 | WP_088263238.1 | GH25 family lysozyme | - |
| NY040_RS01675 (NY040_01675) | 338986..340605 | - | 1620 | WP_088263240.1 | hypothetical protein | - |
| NY040_RS01680 (NY040_01680) | 340605..341909 | - | 1305 | WP_088263241.1 | hypothetical protein | - |
| NY040_RS01685 (NY040_01685) | 341906..342649 | - | 744 | WP_259516541.1 | hypothetical protein | - |
| NY040_RS01690 (NY040_01690) | 342759..343553 | - | 795 | WP_234806376.1 | hypothetical protein | - |
| NY040_RS01695 (NY040_01695) | 343576..349188 | - | 5613 | WP_088263244.1 | phage tail tape measure protein | - |
| NY040_RS01700 (NY040_01700) | 349201..349458 | - | 258 | WP_196970627.1 | hypothetical protein | - |
| NY040_RS01705 (NY040_01705) | 349566..349859 | - | 294 | WP_088263246.1 | hypothetical protein | - |
| NY040_RS01710 (NY040_01710) | 349963..350871 | - | 909 | WP_085691155.1 | hypothetical protein | - |
| NY040_RS01715 (NY040_01715) | 350868..351197 | - | 330 | WP_244659946.1 | hypothetical protein | - |
| NY040_RS01720 (NY040_01720) | 351260..351550 | - | 291 | WP_088263248.1 | hypothetical protein | - |
| NY040_RS01725 (NY040_01725) | 351550..351882 | - | 333 | WP_088263249.1 | hypothetical protein | - |
| NY040_RS01730 (NY040_01730) | 351882..352310 | - | 429 | WP_085691151.1 | Gp19/Gp15/Gp42 family protein | - |
| NY040_RS01735 (NY040_01735) | 352326..352676 | - | 351 | WP_085691150.1 | hypothetical protein | - |
| NY040_RS01740 (NY040_01740) | 352685..353608 | - | 924 | WP_088263250.1 | hypothetical protein | - |
| NY040_RS01745 (NY040_01745) | 353624..354091 | - | 468 | WP_085691148.1 | hypothetical protein | - |
| NY040_RS01750 (NY040_01750) | 354107..355309 | - | 1203 | WP_157893860.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| NY040_RS01755 (NY040_01755) | 355296..356657 | - | 1362 | WP_176719526.1 | hypothetical protein | - |
| NY040_RS01760 (NY040_01760) | 356672..358252 | - | 1581 | WP_133061029.1 | terminase large subunit | - |
| NY040_RS01765 (NY040_01765) | 358206..358538 | - | 333 | WP_082261188.1 | hypothetical protein | - |
| NY040_RS01770 (NY040_01770) | 358653..359372 | - | 720 | WP_088263253.1 | hypothetical protein | - |
| NY040_RS01775 (NY040_01775) | 359482..360111 | - | 630 | WP_259516544.1 | hypothetical protein | - |
| NY040_RS01780 (NY040_01780) | 360124..360681 | - | 558 | WP_088263255.1 | dUTP diphosphatase | - |
| NY040_RS01785 (NY040_01785) | 360944..361129 | - | 186 | WP_082261191.1 | hypothetical protein | - |
| NY040_RS01790 (NY040_01790) | 361199..361867 | - | 669 | WP_196970605.1 | site-specific DNA-methyltransferase | - |
| NY040_RS01795 (NY040_01795) | 361962..362231 | - | 270 | WP_196970604.1 | hypothetical protein | - |
| NY040_RS01800 (NY040_01800) | 362470..362661 | - | 192 | WP_196970603.1 | hypothetical protein | - |
| NY040_RS01805 (NY040_01805) | 362658..362810 | - | 153 | WP_196970602.1 | hypothetical protein | - |
| NY040_RS01810 (NY040_01810) | 362794..363174 | - | 381 | WP_196970601.1 | hypothetical protein | - |
| NY040_RS01815 (NY040_01815) | 363171..363818 | - | 648 | WP_196970600.1 | hypothetical protein | - |
| NY040_RS01820 (NY040_01820) | 363828..364583 | - | 756 | WP_244659951.1 | site-specific DNA-methyltransferase | - |
| NY040_RS01825 (NY040_01825) | 364567..365103 | - | 537 | WP_196970599.1 | hypothetical protein | VF |
| NY040_RS01830 (NY040_01830) | 365096..365587 | - | 492 | WP_196970598.1 | hypothetical protein | - |
| NY040_RS01835 (NY040_01835) | 365584..366003 | - | 420 | WP_196970597.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NY040_RS01840 (NY040_01840) | 366000..366254 | - | 255 | WP_196970596.1 | glutaredoxin domain-containing protein | - |
| NY040_RS01845 (NY040_01845) | 366264..367175 | - | 912 | WP_196970595.1 | hypothetical protein | - |
| NY040_RS01850 (NY040_01850) | 367316..367801 | - | 486 | WP_196970594.1 | single-stranded DNA-binding protein | - |
| NY040_RS01855 (NY040_01855) | 367798..368649 | - | 852 | WP_259516547.1 | hypothetical protein | - |
| NY040_RS01860 (NY040_01860) | 368660..369544 | - | 885 | WP_196970592.1 | YqaJ viral recombinase family protein | - |
| NY040_RS01865 (NY040_01865) | 369532..369915 | - | 384 | WP_181999724.1 | hypothetical protein | - |
| NY040_RS01870 (NY040_01870) | 369897..370088 | - | 192 | WP_121551905.1 | hypothetical protein | - |
| NY040_RS01875 (NY040_01875) | 370078..370560 | - | 483 | WP_196970591.1 | hypothetical protein | - |
| NY040_RS01880 (NY040_01880) | 370768..371118 | - | 351 | WP_196970590.1 | hypothetical protein | - |
| NY040_RS01890 (NY040_01890) | 371603..371938 | - | 336 | WP_196970589.1 | hypothetical protein | - |
| NY040_RS01895 (NY040_01895) | 371956..372132 | - | 177 | WP_151449921.1 | helix-turn-helix domain-containing protein | - |
| NY040_RS01900 (NY040_01900) | 372129..372287 | - | 159 | WP_196970588.1 | hypothetical protein | - |
| NY040_RS01905 (NY040_01905) | 372372..372830 | + | 459 | WP_196970587.1 | hypothetical protein | - |
| NY040_RS01910 (NY040_01910) | 373104..373751 | - | 648 | WP_196970586.1 | Rha family transcriptional regulator | - |
| NY040_RS01915 (NY040_01915) | 373754..374131 | - | 378 | WP_196970585.1 | hypothetical protein | - |
| NY040_RS01920 (NY040_01920) | 374186..374452 | - | 267 | WP_196970584.1 | hypothetical protein | - |
| NY040_RS01925 (NY040_01925) | 374594..375121 | + | 528 | WP_196970583.1 | helix-turn-helix transcriptional regulator | - |
| NY040_RS01930 (NY040_01930) | 375096..375497 | + | 402 | WP_196970582.1 | ImmA/IrrE family metallo-endopeptidase | - |
| NY040_RS01935 (NY040_01935) | 375626..375997 | + | 372 | WP_196970581.1 | hypothetical protein | - |
| NY040_RS01940 (NY040_01940) | 376134..377264 | + | 1131 | WP_196970580.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| NY040_RS01945 (NY040_01945) | 377699..377974 | - | 276 | WP_014309249.1 | hypothetical protein | - |
| NY040_RS01950 (NY040_01950) | 378307..378873 | + | 567 | WP_196970579.1 | Panacea domain-containing protein | Antitoxin Detail |
| NY040_RS01955 (NY040_01955) | 378918..379337 | + | 420 | WP_070794874.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| NY040_RS01960 (NY040_01960) | 379597..380796 | + | 1200 | WP_014318823.1 | cation:proton antiporter | - |
| NY040_RS01965 (NY040_01965) | 380925..381833 | + | 909 | WP_014309246.1 | DUF1906 domain-containing protein | - |
| NY040_RS01970 (NY040_01970) | 381826..382680 | - | 855 | WP_010934561.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|