MGE detailed information
MGE type: Genomic_island MGE length: 28306 bp
Accession: NZ_CP103872 Location: 3950552..3978857 Organism: Herbaspirillum huttiense strain ZXN111 Replicon: chromosome
Accession: NZ_CP103872 Location: 3950552..3978857 Organism: Herbaspirillum huttiense strain ZXN111 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NY669_RS17620 (NY669_17620) | 3946573..3948228 | - | 1656 | WP_259432788.1 | iron ABC transporter permease | - |
| NY669_RS17625 (NY669_17625) | 3948337..3949419 | + | 1083 | WP_259432789.1 | ABC transporter ATP-binding protein | - |
| NY669_RS17630 (NY669_17630) | 3949681..3949917 | + | 237 | WP_151201130.1 | hypothetical protein | - |
| NY669_RS17635 (NY669_17635) | 3950258..3951199 | + | 942 | WP_259432790.1 | hypothetical protein | - |
| NY669_RS17640 (NY669_17640) | 3951312..3952307 | + | 996 | WP_259432791.1 | hypothetical protein | - |
| NY669_RS17645 (NY669_17645) | 3952415..3953140 | + | 726 | WP_259432792.1 | hypothetical protein | - |
| NY669_RS17650 (NY669_17650) | 3953147..3953323 | - | 177 | WP_259432793.1 | hypothetical protein | - |
| NY669_RS17655 (NY669_17655) | 3953323..3953553 | - | 231 | WP_034329828.1 | hypothetical protein | - |
| NY669_RS17660 (NY669_17660) | 3953706..3955097 | - | 1392 | WP_259432794.1 | TAXI family TRAP transporter solute-binding subunit | - |
| NY669_RS17665 (NY669_17665) | 3955158..3955601 | - | 444 | WP_039784640.1 | cyanase | - |
| NY669_RS17670 (NY669_17670) | 3955735..3956589 | - | 855 | WP_259432795.1 | Bicarbonate transport ATP-binding protein CmpD | VF |
| NY669_RS17675 (NY669_17675) | 3956603..3957451 | - | 849 | WP_034329817.1 | nitrate ABC transporter permease | - |
| NY669_RS17680 (NY669_17680) | 3957451..3958854 | - | 1404 | WP_259432796.1 | CmpA/NrtA family ABC transporter substrate-binding protein | - |
| NY669_RS17685 (NY669_17685) | 3959044..3959706 | - | 663 | WP_259432797.1 | Response regulator UvrY | VF |
| NY669_RS17690 (NY669_17690) | 3959703..3960905 | - | 1203 | WP_259432798.1 | PAS domain-containing sensor histidine kinase | - |
| NY669_RS17695 (NY669_17695) | 3960961..3961722 | - | 762 | WP_209534462.1 | General stress protein 39 | VF |
| NY669_RS17700 (NY669_17700) | 3961944..3962663 | - | 720 | WP_034329812.1 | FadR/GntR family transcriptional regulator | - |
| NY669_RS17705 (NY669_17705) | 3962867..3963187 | - | 321 | WP_034329811.1 | transcriptional regulator | Antitoxin Detail |
| NY669_RS17710 (NY669_17710) | 3963184..3963582 | - | 399 | WP_259435300.1 | toxin | Toxin Detail |
| NY669_RS17715 (NY669_17715) | 3963582..3964910 | - | 1329 | WP_121045052.1 | MFS transporter | - |
| NY669_RS17720 (NY669_17720) | 3965000..3966202 | - | 1203 | WP_134222985.1 | M20 aminoacylase family protein | - |
| NY669_RS17725 (NY669_17725) | 3966539..3967519 | + | 981 | WP_259432799.1 | LysR family transcriptional regulator | - |
| NY669_RS17730 (NY669_17730) | 3967576..3968481 | + | 906 | WP_259432800.1 | HTH-type transcriptional regulator YofA | VF |
| NY669_RS17735 (NY669_17735) | 3968620..3969474 | + | 855 | WP_259432801.1 | putative hydro-lyase | - |
| NY669_RS17740 (NY669_17740) | 3969580..3970824 | + | 1245 | WP_259432802.1 | MFS transporter | - |
| NY669_RS17745 (NY669_17745) | 3970856..3971458 | - | 603 | WP_259432803.1 | RNA 2'-phosphotransferase | - |
| NY669_RS17750 (NY669_17750) | 3971653..3972009 | - | 357 | WP_259432804.1 | hypothetical protein | - |
| NY669_RS17755 (NY669_17755) | 3972115..3972357 | - | 243 | WP_259432805.1 | hypothetical protein | - |
| NY669_RS17760 (NY669_17760) | 3972410..3972796 | - | 387 | WP_259432806.1 | hypothetical protein | - |
| NY669_RS17765 (NY669_17765) | 3972858..3973475 | - | 618 | WP_259432807.1 | hypothetical protein | - |
| NY669_RS17770 (NY669_17770) | 3973899..3974792 | - | 894 | WP_039784939.1 | LysR family transcriptional regulator | - |
| NY669_RS17775 (NY669_17775) | 3974901..3975851 | + | 951 | WP_259432808.1 | NAD-dependent epimerase/dehydratase family protein | - |
| NY669_RS17780 (NY669_17780) | 3976011..3976856 | - | 846 | WP_259432809.1 | SMI1/KNR4 family protein | - |
| NY669_RS17785 (NY669_17785) | 3976967..3977167 | - | 201 | WP_259432810.1 | entry exclusion lipoprotein TrbK | - |
| NY669_RS17790 (NY669_17790) | 3977524..3978192 | - | 669 | WP_259432811.1 | DUF2268 domain-containing protein | - |
| NY669_RS17795 (NY669_17795) | 3978189..3978857 | - | 669 | WP_259432812.1 | LpxA family transferase | - |
| NY669_RS17800 (NY669_17800) | 3978943..3979131 | - | 189 | WP_259435301.1 | LysR substrate-binding domain-containing protein | - |
| NY669_RS17805 (NY669_17805) | 3979199..3980290 | - | 1092 | WP_259432813.1 | tartrate dehydrogenase | - |
| NY669_RS17810 (NY669_17810) | 3980466..3981437 | + | 972 | WP_259432814.1 | LysR family transcriptional regulator | - |
| NY669_RS17815 (NY669_17815) | 3981479..3981769 | - | 291 | WP_259432815.1 | nucleotidyltransferase family protein | - |
| NY669_RS17820 (NY669_17820) | 3981967..3982749 | + | 783 | WP_259432816.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|