MGE detailed information
MGE type: Prophage MGE length: 56607 bp
Accession: NZ_CP103852 Location: 228152..284758 Organism: Ralstonia pseudosolanacearum strain LMG 9673 Replicon: chromosome
Accession: NZ_CP103852 Location: 228152..284758 Organism: Ralstonia pseudosolanacearum strain LMG 9673 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NY025_RS08800 (NY025_08800) | 225688..226260 | + | 573 | WP_197366430.1 | hypothetical protein | - |
| NY025_RS08805 (NY025_08805) | 226361..228124 | + | 1764 | WP_197366429.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| NY025_RS08810 (NY025_08810) | 228359..229264 | + | 906 | WP_230643376.1 | hypothetical protein | - |
| NY025_RS08815 (NY025_08815) | 229437..229778 | - | 342 | WP_259423447.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NY025_RS08820 (NY025_08820) | 229789..230064 | - | 276 | WP_020832976.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| NY025_RS08825 (NY025_08825) | 231408..232421 | - | 1014 | Protein_210 | IS5 family transposase ISRso9 | Transposase |
| NY025_RS08830 (NY025_08830) | 233543..234394 | - | 852 | WP_193035510.1 | restriction endonuclease | - |
| NY025_RS08835 (NY025_08835) | 234570..235043 | - | 474 | WP_193035512.1 | hypothetical protein | - |
| NY025_RS08840 (NY025_08840) | 235040..235414 | - | 375 | WP_197366320.1 | site-specific recombinase resolvase | - |
| NY025_RS08845 (NY025_08845) | 235411..236799 | - | 1389 | WP_197366321.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| NY025_RS08850 (NY025_08850) | 236796..237245 | - | 450 | WP_197366322.1 | DUF2924 domain-containing protein | - |
| NY025_RS08855 (NY025_08855) | 237245..237436 | - | 192 | WP_231688813.1 | hypothetical protein | - |
| NY025_RS08860 (NY025_08860) | 237616..238290 | + | 675 | WP_193027017.1 | hypothetical protein | - |
| NY025_RS08865 (NY025_08865) | 238400..240637 | - | 2238 | WP_197366324.1 | hypothetical protein | - |
| NY025_RS08870 (NY025_08870) | 240697..241137 | - | 441 | WP_197366325.1 | helix-turn-helix domain-containing protein | - |
| NY025_RS08875 (NY025_08875) | 241366..241629 | + | 264 | WP_197366326.1 | DNA-binding protein | - |
| NY025_RS08880 (NY025_08880) | 241640..242122 | + | 483 | WP_197366327.1 | hypothetical protein | - |
| NY025_RS08885 (NY025_08885) | 242119..242991 | + | 873 | WP_197366328.1 | ATP-binding protein | - |
| NY025_RS08890 (NY025_08890) | 242988..243626 | + | 639 | WP_193035529.1 | hypothetical protein | - |
| NY025_RS08895 (NY025_08895) | 243634..244110 | + | 477 | WP_197366329.1 | DUF6511 domain-containing protein | - |
| NY025_RS08900 (NY025_08900) | 244110..244847 | + | 738 | WP_197366330.1 | hypothetical protein | - |
| NY025_RS08905 (NY025_08905) | 244844..245104 | + | 261 | WP_197366331.1 | DNA-binding protein | - |
| NY025_RS08910 (NY025_08910) | 245101..247380 | + | 2280 | WP_197366332.1 | phage/plasmid primase, P4 family | - |
| NY025_RS08915 (NY025_08915) | 247523..247987 | + | 465 | WP_197366333.1 | hypothetical protein | - |
| NY025_RS08920 (NY025_08920) | 247989..248198 | + | 210 | WP_193035540.1 | hypothetical protein | - |
| NY025_RS08925 (NY025_08925) | 248191..248574 | + | 384 | WP_193035542.1 | DUF6362 family protein | - |
| NY025_RS08930 (NY025_08930) | 248628..248894 | + | 267 | WP_193027032.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| NY025_RS08935 (NY025_08935) | 248894..249193 | + | 300 | WP_193035546.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NY025_RS08940 (NY025_08940) | 249744..251144 | + | 1401 | WP_197366334.1 | site-specific DNA-methyltransferase | - |
| NY025_RS08945 (NY025_08945) | 251141..252409 | + | 1269 | WP_197366335.1 | site-specific DNA-methyltransferase | - |
| NY025_RS08950 (NY025_08950) | 252414..253151 | - | 738 | WP_230643298.1 | type III secretion system effector protein | - |
| NY025_RS08955 (NY025_08955) | 253424..253612 | - | 189 | WP_138928254.1 | hypothetical protein | - |
| NY025_RS08960 (NY025_08960) | 253736..254062 | - | 327 | WP_197366343.1 | DUF3489 domain-containing protein | - |
| NY025_RS08965 (NY025_08965) | 254183..254461 | - | 279 | WP_197366336.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NY025_RS08970 (NY025_08970) | 254461..254670 | - | 210 | WP_064049969.1 | hypothetical protein | - |
| NY025_RS08975 (NY025_08975) | 254956..255426 | - | 471 | WP_197366337.1 | DUF3489 domain-containing protein | - |
| NY025_RS08980 (NY025_08980) | 255913..256602 | + | 690 | WP_230643301.1 | YopT-type cysteine protease domain-containing protein | - |
| NY025_RS08985 (NY025_08985) | 256766..257038 | - | 273 | WP_230643305.1 | hypothetical protein | - |
| NY025_RS08990 (NY025_08990) | 257136..257672 | + | 537 | WP_197366340.1 | elements of external origin | - |
| NY025_RS08995 (NY025_08995) | 257672..259639 | + | 1968 | WP_193035554.1 | phage terminase large subunit family protein | - |
| NY025_RS09000 (NY025_09000) | 259683..260192 | + | 510 | WP_193035555.1 | hypothetical protein | - |
| NY025_RS09005 (NY025_09005) | 260203..260595 | + | 393 | WP_193035557.1 | hypothetical protein | - |
| NY025_RS09010 (NY025_09010) | 260595..260816 | + | 222 | WP_193026223.1 | hypothetical protein | - |
| NY025_RS09015 (NY025_09015) | 260816..262342 | + | 1527 | WP_197366469.1 | phage portal protein | - |
| NY025_RS09020 (NY025_09020) | 262352..263602 | + | 1251 | WP_197366470.1 | S49 family peptidase | - |
| NY025_RS09025 (NY025_09025) | 263612..263989 | + | 378 | WP_197366471.1 | head decoration protein | - |
| NY025_RS09030 (NY025_09030) | 263996..265000 | + | 1005 | WP_197366472.1 | major capsid protein | - |
| NY025_RS09035 (NY025_09035) | 265003..265305 | + | 303 | WP_197366473.1 | hypothetical protein | - |
| NY025_RS09040 (NY025_09040) | 265321..265767 | + | 447 | WP_197366474.1 | hypothetical protein | - |
| NY025_RS09045 (NY025_09045) | 265890..266660 | + | 771 | WP_259423464.1 | hypothetical protein | - |
| NY025_RS09050 (NY025_09050) | 266669..267061 | + | 393 | WP_197366558.1 | hypothetical protein | - |
| NY025_RS09055 (NY025_09055) | 267112..267279 | + | 168 | WP_230643730.1 | hypothetical protein | - |
| NY025_RS09060 (NY025_09060) | 267254..267898 | + | 645 | WP_259423467.1 | DUF6441 family protein | - |
| NY025_RS09065 (NY025_09065) | 267941..268231 | - | 291 | WP_064051869.1 | DNA-binding protein Bv3F | VF |
| NY025_RS09070 (NY025_09070) | 268426..269619 | - | 1194 | WP_269436757.1 | YopJ family acetyltransferase | - |
| NY025_RS09075 (NY025_09075) | 270176..270373 | + | 198 | WP_230643628.1 | DUF6441 family protein | - |
| NY025_RS09080 (NY025_09080) | 270378..270791 | - | 414 | WP_259423471.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NY025_RS09085 (NY025_09085) | 270788..271039 | - | 252 | WP_020749302.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NY025_RS09090 (NY025_09090) | 271115..275215 | + | 4101 | WP_259423473.1 | tape measure protein | - |
| NY025_RS09095 (NY025_09095) | 275221..275616 | + | 396 | WP_197366418.1 | hypothetical protein | - |
| NY025_RS09100 (NY025_09100) | 275617..279207 | + | 3591 | WP_197366417.1 | hypothetical protein | - |
| NY025_RS09105 (NY025_09105) | 279204..280370 | + | 1167 | WP_193027060.1 | hypothetical protein | - |
| NY025_RS09110 (NY025_09110) | 280374..280856 | + | 483 | WP_193027062.1 | hypothetical protein | - |
| NY025_RS09115 (NY025_09115) | 280853..281251 | + | 399 | WP_193027064.1 | hypothetical protein | - |
| NY025_RS09120 (NY025_09120) | 281258..283102 | + | 1845 | WP_197366416.1 | hypothetical protein | - |
| NY025_RS09125 (NY025_09125) | 283112..283336 | + | 225 | WP_197366415.1 | hypothetical protein | - |
| NY025_RS09130 (NY025_09130) | 283404..283694 | + | 291 | WP_193035592.1 | DUF6127 family protein | - |
| NY025_RS09135 (NY025_09135) | 283691..284173 | + | 483 | WP_197366414.1 | hypothetical protein | - |
| NY025_RS09140 (NY025_09140) | 284297..284758 | + | 462 | WP_197366413.1 | lysozyme | - |
| NY025_RS09145 (NY025_09145) | 284826..285122 | + | 297 | WP_193027077.1 | hypothetical protein | - |
| NY025_RS09150 (NY025_09150) | 285176..285514 | - | 339 | WP_193027079.1 | DUF1484 domain-containing protein | - |
| NY025_RS09155 (NY025_09155) | 285938..286884 | - | 947 | Protein_276 | COG2958 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|