MGE detailed information
MGE type: Genomic_island MGE length: 9002 bp
Accession: NZ_CP103852 Location: 1969368..1978369 Organism: Ralstonia pseudosolanacearum strain LMG 9673 Replicon: chromosome
Accession: NZ_CP103852 Location: 1969368..1978369 Organism: Ralstonia pseudosolanacearum strain LMG 9673 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NY025_RS17045 (NY025_17045) | 1966383..1966694 | + | 312 | WP_193025719.1 | hypothetical protein | - |
| NY025_RS17050 (NY025_17050) | 1966698..1968290 | - | 1593 | WP_193025718.1 | IS66 family transposase | - |
| NY025_RS17055 (NY025_17055) | 1968321..1968668 | - | 348 | WP_193025717.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| NY025_RS17060 (NY025_17060) | 1968665..1969078 | - | 414 | WP_230642934.1 | transposase | - |
| NY025_RS17065 (NY025_17065) | 1969368..1969577 | + | 210 | WP_011001381.1 | ribbon-helix-helix protein, CopG family | - |
| NY025_RS17070 (NY025_17070) | 1969574..1969840 | + | 267 | WP_011001382.1 | hypothetical protein | - |
| NY025_RS17075 (NY025_17075) | 1970077..1971042 | - | 966 | WP_193025715.1 | pca operon transcription factor PcaQ | - |
| NY025_RS17080 (NY025_17080) | 1971141..1971881 | + | 741 | WP_193025714.1 | protocatechuate 3,4-dioxygenase subunit beta | - |
| NY025_RS17085 (NY025_17085) | 1971878..1972576 | + | 699 | WP_193034642.1 | protocatechuate 3,4-dioxygenase subunit alpha | - |
| NY025_RS17090 (NY025_17090) | 1972724..1973320 | + | 597 | WP_230642937.1 | RNA 2',3'-cyclic phosphodiesterase | - |
| NY025_RS17095 (NY025_17095) | 1973353..1974081 | - | 729 | WP_193034641.1 | DsbA family protein | - |
| NY025_RS17100 (NY025_17100) | 1974307..1975509 | - | 1203 | WP_193025711.1 | MFS transporter | - |
| NY025_RS17105 (NY025_17105) | 1975506..1976843 | - | 1338 | WP_193025710.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| NY025_RS17110 (NY025_17110) | 1976847..1977101 | - | 255 | WP_020749234.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| NY025_RS17115 (NY025_17115) | 1977205..1978044 | - | 840 | WP_193025709.1 | oxaloacetate decarboxylase | - |
| NY025_RS17120 (NY025_17120) | 1978199..1978369 | + | 171 | WP_193025708.1 | hypothetical protein | - |
| NY025_RS17125 (NY025_17125) | 1978366..1979004 | + | 639 | WP_193025707.1 | 7-carboxy-7-deazaguanine synthase | - |
| NY025_RS17130 (NY025_17130) | 1979072..1979548 | + | 477 | WP_193025706.1 | 6-carboxytetrahydropterin synthase QueD | - |
| NY025_RS17135 (NY025_17135) | 1979568..1980119 | + | 552 | WP_193025705.1 | tRNA adenosine(34) deaminase TadA | - |
| NY025_RS17140 (NY025_17140) | 1980116..1981042 | + | 927 | WP_064049931.1 | muramoyltetrapeptide carboxypeptidase | - |
| NY025_RS17145 (NY025_17145) | 1981155..1982777 | + | 1623 | WP_193025704.1 | ABC-F family ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|