MGE detailed information
MGE type: Prophage MGE length: 40131 bp
Accession: NZ_CP103852 Location: 1267290..1307420 Organism: Ralstonia pseudosolanacearum strain LMG 9673 Replicon: chromosome
Accession: NZ_CP103852 Location: 1267290..1307420 Organism: Ralstonia pseudosolanacearum strain LMG 9673 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NY025_RS13710 (NY025_13710) | 1262547..1263242 | + | 696 | WP_193026246.1 | zeta toxin family protein | - |
| NY025_RS13715 (NY025_13715) | 1264157..1264411 | + | 255 | WP_138928242.1 | DNA-binding protein | - |
| NY025_RS13720 (NY025_13720) | 1264408..1264905 | + | 498 | WP_197366253.1 | hypothetical protein | - |
| NY025_RS13725 (NY025_13725) | 1264902..1265774 | + | 873 | WP_197366252.1 | ATP-binding protein | - |
| NY025_RS13730 (NY025_13730) | 1265793..1266425 | + | 633 | WP_197366251.1 | hypothetical protein | - |
| NY025_RS13735 (NY025_13735) | 1266435..1266902 | + | 468 | WP_259423534.1 | DUF6511 domain-containing protein | - |
| NY025_RS13740 (NY025_13740) | 1266908..1267306 | + | 399 | WP_197366249.1 | hypothetical protein | - |
| NY025_RS13745 (NY025_13745) | 1267290..1269587 | + | 2298 | WP_197366248.1 | phage/plasmid primase, P4 family | - |
| NY025_RS13750 (NY025_13750) | 1269818..1270030 | + | 213 | WP_197366247.1 | hypothetical protein | - |
| NY025_RS13755 (NY025_13755) | 1270020..1270427 | + | 408 | WP_197366246.1 | DUF6362 family protein | - |
| NY025_RS13760 (NY025_13760) | 1270825..1272225 | + | 1401 | WP_197366245.1 | site-specific DNA-methyltransferase | - |
| NY025_RS13765 (NY025_13765) | 1272222..1273475 | + | 1254 | WP_197366244.1 | site-specific DNA-methyltransferase | - |
| NY025_RS13770 (NY025_13770) | 1273823..1274788 | + | 966 | WP_197366243.1 | hypothetical protein | - |
| NY025_RS13775 (NY025_13775) | 1274991..1276511 | + | 1521 | WP_197366242.1 | hypothetical protein | - |
| NY025_RS13780 (NY025_13780) | 1276683..1277183 | - | 501 | WP_197366258.1 | DUF3489 domain-containing protein | - |
| NY025_RS13785 (NY025_13785) | 1277278..1277517 | - | 240 | WP_230643217.1 | hypothetical protein | - |
| NY025_RS13790 (NY025_13790) | 1277612..1278148 | + | 537 | WP_197366241.1 | elements of external origin | - |
| NY025_RS13795 (NY025_13795) | 1278148..1280115 | + | 1968 | WP_259423535.1 | phage terminase large subunit family protein | - |
| NY025_RS13800 (NY025_13800) | 1280158..1280667 | + | 510 | WP_197366463.1 | hypothetical protein | - |
| NY025_RS13805 (NY025_13805) | 1280678..1281070 | + | 393 | WP_197366462.1 | hypothetical protein | - |
| NY025_RS13810 (NY025_13810) | 1281070..1281291 | + | 222 | WP_197366461.1 | hypothetical protein | - |
| NY025_RS13815 (NY025_13815) | 1281291..1282829 | + | 1539 | WP_197366460.1 | phage portal protein | - |
| NY025_RS13820 (NY025_13820) | 1282839..1284086 | + | 1248 | WP_197366459.1 | S49 family peptidase | - |
| NY025_RS13825 (NY025_13825) | 1284096..1284473 | + | 378 | WP_193026220.1 | head decoration protein | - |
| NY025_RS13830 (NY025_13830) | 1284480..1285484 | + | 1005 | WP_193026219.1 | major capsid protein | - |
| NY025_RS13835 (NY025_13835) | 1285487..1285789 | + | 303 | WP_193026218.1 | hypothetical protein | - |
| NY025_RS13840 (NY025_13840) | 1285805..1286251 | + | 447 | WP_193035568.1 | hypothetical protein | - |
| NY025_RS13845 (NY025_13845) | 1286379..1287149 | + | 771 | WP_193035570.1 | hypothetical protein | - |
| NY025_RS13850 (NY025_13850) | 1287158..1287550 | + | 393 | WP_197366558.1 | hypothetical protein | - |
| NY025_RS13855 (NY025_13855) | 1287601..1287768 | + | 168 | WP_230643730.1 | hypothetical protein | - |
| NY025_RS13860 (NY025_13860) | 1287743..1288387 | + | 645 | WP_247360885.1 | DUF6441 family protein | - |
| NY025_RS13865 (NY025_13865) | 1288431..1288721 | - | 291 | WP_197366495.1 | DNA-binding protein Bv3F | VF |
| NY025_RS13870 (NY025_13870) | 1288903..1289898 | - | 996 | WP_280926349.1 | YopJ family acetyltransferase | - |
| NY025_RS13875 (NY025_13875) | 1290623..1290847 | + | 225 | WP_230643474.1 | DUF6441 family protein | - |
| NY025_RS13880 (NY025_13880) | 1290890..1291180 | - | 291 | WP_193026211.1 | DNA-binding protein Bv3F | VF |
| NY025_RS13885 (NY025_13885) | 1291732..1292880 | + | 1149 | WP_197366493.1 | DNA cytosine methyltransferase | - |
| NY025_RS13890 (NY025_13890) | 1293025..1293438 | - | 414 | WP_193026209.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NY025_RS13895 (NY025_13895) | 1293435..1293686 | - | 252 | WP_020749302.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NY025_RS13900 (NY025_13900) | 1293762..1297862 | + | 4101 | WP_259423536.1 | tape measure protein | - |
| NY025_RS13905 (NY025_13905) | 1297868..1298263 | + | 396 | WP_197366423.1 | hypothetical protein | - |
| NY025_RS13910 (NY025_13910) | 1298264..1301854 | + | 3591 | WP_197366424.1 | hypothetical protein | - |
| NY025_RS13915 (NY025_13915) | 1301869..1303035 | + | 1167 | WP_197366425.1 | hypothetical protein | - |
| NY025_RS13920 (NY025_13920) | 1303039..1303521 | + | 483 | WP_193026204.1 | hypothetical protein | - |
| NY025_RS13925 (NY025_13925) | 1303518..1303916 | + | 399 | WP_193026203.1 | hypothetical protein | - |
| NY025_RS13930 (NY025_13930) | 1303923..1305767 | + | 1845 | WP_197366426.1 | hypothetical protein | - |
| NY025_RS13935 (NY025_13935) | 1305777..1306001 | + | 225 | WP_197366427.1 | hypothetical protein | - |
| NY025_RS13940 (NY025_13940) | 1306066..1306356 | + | 291 | WP_064051986.1 | DUF6127 family protein | - |
| NY025_RS13945 (NY025_13945) | 1306353..1306835 | + | 483 | WP_197366428.1 | hypothetical protein | - |
| NY025_RS13950 (NY025_13950) | 1306959..1307420 | + | 462 | WP_193027071.1 | lysozyme | - |
| NY025_RS13955 (NY025_13955) | 1307488..1307784 | + | 297 | WP_193036998.1 | hypothetical protein | - |
| NY025_RS13960 (NY025_13960) | 1307836..1308174 | - | 339 | WP_193029344.1 | DUF1484 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|