MGE detailed information
MGE type: Genomic_island MGE length: 43861 bp
Accession: NZ_CP103791 Location: 1223000..1266860 Organism: Salmonella enterica subsp. enterica serovar Infantis strain MRS17_00712 Replicon: chromosome
Accession: NZ_CP103791 Location: 1223000..1266860 Organism: Salmonella enterica subsp. enterica serovar Infantis strain MRS17_00712 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NYQ90_RS05845 () | 1220500..1221042 | + | 543 | WP_023994002.1 | type VI secretion system contractile sheath small subunit | - |
NYQ90_RS05850 () | 1221066..1222574 | + | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
NYQ90_RS05855 () | 1222627..1223028 | + | 402 | WP_001147175.1 | BPSL0067 family protein | - |
NYQ90_RS05860 () | 1223000..1223425 | + | 426 | WP_001171576.1 | hypothetical protein | - |
NYQ90_RS05865 () | 1223662..1224147 | + | 486 | WP_000312802.1 | Protein hcp1 | VF |
NYQ90_RS05870 () | 1224214..1224408 | + | 195 | Protein_1140 | type VI secretion system lipoprotein TssJ | - |
NYQ90_RS05875 () | 1224451..1224936 | + | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
NYQ90_RS05880 () | 1224921..1225304 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
NYQ90_RS05885 () | 1225447..1225932 | + | 486 | WP_000119443.1 | Protein hcp1 | VF |
NYQ90_RS05890 () | 1225999..1226535 | + | 537 | WP_020898423.1 | hypothetical protein | VF |
NYQ90_RS05895 () | 1226539..1227882 | + | 1344 | WP_000118732.1 | hypothetical protein | VF |
NYQ90_RS05900 () | 1227879..1229183 | + | 1305 | WP_000132483.1 | Peptidoglycan-associated lipoprotein | VF |
NYQ90_RS05905 () | 1229188..1229961 | + | 774 | WP_023993999.1 | Rap1a/Tai family immunity protein | - |
NYQ90_RS05910 () | 1230163..1230594 | + | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
NYQ90_RS05915 () | 1230628..1234497 | + | 3870 | WP_023993998.1 | hypothetical protein | VF |
NYQ90_RS05920 () | 1234497..1235264 | + | 768 | WP_023993997.1 | TagF domain-containing protein | - |
NYQ90_RS05925 () | 1235307..1235777 | + | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
NYQ90_RS05930 () | 1235762..1236223 | + | 462 | WP_001684272.1 | hypothetical protein | - |
NYQ90_RS05935 () | 1236259..1236354 | + | 96 | Protein_1153 | hypothetical protein | - |
NYQ90_RS05940 () | 1236351..1236767 | + | 417 | WP_000759642.1 | DUF2195 family protein | - |
NYQ90_RS05945 () | 1236791..1237312 | + | 522 | WP_088360764.1 | DUF2778 domain-containing protein | - |
NYQ90_RS05950 () | 1237709..1239940 | + | 2232 | WP_023993996.1 | hypothetical protein | VF |
NYQ90_RS05955 () | 1240000..1240458 | + | 459 | WP_023993995.1 | DcrB-related protein | - |
NYQ90_RS05960 () | 1240474..1245216 | + | 4743 | WP_023993994.1 | RHS repeat-associated core domain-containing protein | - |
NYQ90_RS05965 () | 1245213..1245557 | + | 345 | WP_023218822.1 | hypothetical protein | - |
NYQ90_RS05970 () | 1245624..1245881 | - | 258 | WP_023243487.1 | SymE family type I addiction module toxin | Toxin Detail |
- | 1245706..1246038 | + | 333 | - | - | Antitoxin Detail |
NYQ90_RS05975 () | 1246215..1246508 | + | 294 | WP_039515457.1 | hypothetical protein | - |
NYQ90_RS05980 () | 1247325..1247792 | + | 468 | WP_000828178.1 | sugar tyrosine-protein kinase | - |
NYQ90_RS05985 () | 1248109..1248387 | + | 279 | WP_077677834.1 | hypothetical protein | - |
NYQ90_RS05990 () | 1248454..1248768 | - | 315 | WP_023892102.1 | SymE family type I addiction module toxin | - |
NYQ90_RS05995 () | 1248821..1249522 | + | 702 | Protein_1165 | integrase core domain-containing protein | - |
NYQ90_RS06000 () | 1250221..1250784 | + | 564 | WP_023993992.1 | Saf-pilin pilus formation protein SafA | - |
NYQ90_RS06005 () | 1250859..1251599 | + | 741 | WP_023204745.1 | Chaperone protein caf1M | VF |
NYQ90_RS06010 () | 1251623..1254133 | + | 2511 | WP_023993991.1 | F1 capsule-anchoring protein | VF |
NYQ90_RS06015 () | 1254155..1254625 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
NYQ90_RS06020 () | 1255032..1255853 | + | 822 | WP_023994368.1 | polysaccharide deacetylase family protein | - |
NYQ90_RS06025 () | 1255936..1256176 | + | 241 | Protein_1171 | PerC family transcriptional regulator | - |
NYQ90_RS06030 () | 1256670..1257617 | + | 948 | WP_023993811.1 | LysR family transcriptional regulator | - |
NYQ90_RS06035 () | 1257737..1257856 | + | 120 | Protein_1173 | hypothetical protein | - |
NYQ90_RS06040 () | 1257937..1258123 | + | 187 | Protein_1174 | transposase | - |
NYQ90_RS06045 () | 1258163..1258720 | - | 558 | Protein_1175 | IS21 family transposase ISEc62 | Transposase |
NYQ90_RS06050 () | 1259755..1260465 | + | 711 | WP_001009508.1 | hypothetical protein | VF |
NYQ90_RS06055 () | 1260516..1261091 | + | 576 | WP_000287810.1 | CFA/I fimbrial subunit B | VF |
NYQ90_RS06060 () | 1261200..1263887 | + | 2688 | WP_038993082.1 | hypothetical protein | VF |
NYQ90_RS06065 () | 1263910..1264989 | + | 1080 | WP_000066479.1 | fimbrial protein TcfD | - |
NYQ90_RS06070 () | 1265122..1265469 | + | 348 | WP_023993809.1 | Lrp/AsnC family transcriptional regulator | - |
NYQ90_RS06075 () | 1266926..1267059 | - | 134 | Protein_1181 | transposase | - |
NYQ90_RS06080 () | 1267095..1267283 | + | 189 | WP_031603649.1 | hypothetical protein | - |
NYQ90_RS06085 () | 1267287..1268006 | - | 720 | WP_000787601.1 | adhesin/invasin protein PagN | - |
NYQ90_RS06090 () | 1268337..1268744 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
NYQ90_RS06095 () | 1269054..1269821 | - | 768 | WP_023993808.1 | amidohydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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