MGE detailed information
MGE type: IScluster/Tn MGE length: 6273 bp
Accession: NZ_CP103771 Location: 2587772..2594044 Organism: Salmonella enterica strain S1905 Replicon: chromosome
Accession: NZ_CP103771 Location: 2587772..2594044 Organism: Salmonella enterica strain S1905 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYS49_RS12495 (2583517) | 2583517..2583681 | - | 165 | WP_001134851.1 | hypothetical protein | - |
| NYS49_RS12500 (2583966) | 2583966..2584688 | - | 723 | WP_000182076.1 | SPI-1 type III secretion system guanine nucleotide exchange factor SopE2 | - |
| NYS49_RS12505 (2585372) | 2585372..2585767 | + | 396 | WP_000422887.1 | DUF1398 domain-containing protein | - |
| NYS49_RS12510 (2586096) | 2586096..2586572 | + | 477 | WP_023138823.1 | hypothetical protein | - |
| NYS49_RS12515 (2586724) | 2586724..2586876 | + | 153 | WP_157794946.1 | hypothetical protein | - |
| NYS49_RS12520 (2586988) | 2586988..2587446 | - | 459 | WP_001195655.1 | hypothetical protein | - |
| NYS49_RS12525 (2587772) | 2587772..2588919 | + | 1148 | WP_112324583.1 | IS3 family transposase ISEhe3 | Transposase |
| NYS49_RS12530 (2588950) | 2588950..2589507 | - | 558 | WP_000179886.1 | hypothetical protein | - |
| NYS49_RS12535 (2589611) | 2589611..2589820 | - | 210 | WP_023137948.1 | hypothetical protein | - |
| NYS49_RS12540 (2589850) | 2589850..2590149 | - | 300 | WP_000775225.1 | hypothetical protein | - |
| NYS49_RS12545 (2590328) | 2590328..2590639 | + | 312 | WP_000558157.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| NYS49_RS12550 (2590636) | 2590636..2591055 | + | 420 | WP_000561389.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| NYS49_RS12555 (2591308) | 2591308..2591960 | + | 653 | Protein_2451 | glycosyltransferase | - |
| NYS49_RS12560 (2592196) | 2592196..2592615 | - | 420 | WP_023137951.1 | GNAT family N-acetyltransferase | - |
| NYS49_RS12565 (2592985) | 2592985..2593254 | + | 270 | WP_077908593.1 | hypothetical protein | - |
| NYS49_RS12570 (2593420) | 2593420..2593560 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| NYS49_RS12575 (2593706) | 2593706..2594247 | - | 542 | Protein_2455 | IS256 family transposase ISEc39 | Transposase |
| NYS49_RS12580 (2594267) | 2594267..2594359 | - | 93 | WP_231923105.1 | hypothetical protein | - |
| NYS49_RS12585 (2594389) | 2594389..2596809 | - | 2421 | WP_024149295.1 | type III secretion system effector SspH3 | - |
| NYS49_RS12590 (2596982) | 2596982..2597065 | - | 84 | Protein_2458 | phage tail protein | - |
| NYS49_RS12595 (2597077) | 2597077..2597424 | + | 348 | Protein_2459 | tyrosine-type recombinase/integrase | - |
| NYS49_RS12600 (2597798) | 2597798..2598151 | - | 354 | WP_000722368.1 | YebY family protein | - |
| NYS49_RS12605 (2598168) | 2598168..2599043 | - | 876 | WP_023137953.1 | copper homeostasis membrane protein CopD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|