MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 97212 bp
Accession: NZ_CP103764 Location: 1..97212 Organism: Escherichia coli strain 5283 Replicon: plasmid pMB9880_2
Accession: NZ_CP103764 Location: 1..97212 Organism: Escherichia coli strain 5283 Replicon: plasmid pMB9880_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T11_RS25560 (M5T11_25560) | 1..222 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| M5T11_RS25565 (M5T11_25565) | 222..602 | + | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| M5T11_RS25570 (M5T11_25570) | 607..786 | + | 180 | WP_000113018.1 | hypothetical protein | - |
| M5T11_RS25575 (M5T11_25575) | 814..1857 | + | 1044 | WP_029393260.1 | DUF968 domain-containing protein | - |
| M5T11_RS25580 (M5T11_25580) | 1946..2398 | + | 453 | WP_001326849.1 | late promoter-activating protein | - |
| M5T11_RS25585 (M5T11_25585) | 2484..3677 | + | 1194 | WP_060578234.1 | hypothetical protein | - |
| M5T11_RS25590 (M5T11_25590) | 3677..5161 | + | 1485 | WP_000124159.1 | hypothetical protein | - |
| M5T11_RS25595 (M5T11_25595) | 5375..5476 | + | 102 | Protein_7 | transcriptional regulator | - |
| M5T11_RS25600 (M5T11_25600) | 5501..5722 | + | 222 | WP_000201261.1 | host cell division inhibitor Icd-like protein | - |
| M5T11_RS25605 (M5T11_25605) | 5719..6837 | + | 1119 | WP_032246984.1 | phage antirepressor KilAC domain-containing protein | - |
| M5T11_RS25610 (M5T11_25610) | 6870..7721 | - | 852 | WP_000611664.1 | phage repressor protein C1 | - |
| M5T11_RS25615 (M5T11_25615) | 7832..8041 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| M5T11_RS25620 (M5T11_25620) | 8638..8859 | + | 222 | WP_000542336.1 | hypothetical protein | - |
| M5T11_RS25625 (M5T11_25625) | 8867..9898 | + | 1032 | WP_000067530.1 | site-specific integrase | - |
| M5T11_RS25630 (M5T11_25630) | 9949..10260 | + | 312 | WP_001224234.1 | hypothetical protein | - |
| M5T11_RS25635 (M5T11_25635) | 10507..11067 | + | 561 | WP_023356281.1 | Ref family protein | - |
| M5T11_RS25640 (M5T11_25640) | 11257..11898 | + | 642 | WP_023351534.1 | hypothetical protein | - |
| M5T11_RS25645 (M5T11_25645) | 12001..13128 | + | 1128 | WP_000526244.1 | RelA/SpoT domain-containing protein | - |
| M5T11_RS25650 (M5T11_25650) | 13165..13413 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| M5T11_RS25655 (M5T11_25655) | 13410..13850 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| M5T11_RS25660 (M5T11_25660) | 13884..20651 | - | 6768 | WP_060578233.1 | N-6 DNA methylase | - |
| M5T11_RS25665 (M5T11_25665) | 20727..22448 | + | 1722 | WP_025210446.1 | hypothetical protein | - |
| M5T11_RS25670 (M5T11_25670) | 22481..23611 | - | 1131 | WP_001312284.1 | IS200-IS605 family transposase ISEc42 | Transposase |
| M5T11_RS25675 (M5T11_25675) | 23724..24743 | + | 1020 | WP_000132937.1 | head processing protein | - |
| M5T11_RS25680 (M5T11_25680) | 24788..25036 | - | 249 | WP_024187336.1 | hypothetical protein | - |
| M5T11_RS25685 (M5T11_25685) | 25029..25586 | - | 558 | WP_001345478.1 | lysozyme | - |
| M5T11_RS25690 (M5T11_25690) | 25756..26244 | + | 489 | WP_000068872.1 | single-stranded DNA-binding protein | - |
| M5T11_RS25695 (M5T11_25695) | 26493..27848 | + | 1356 | WP_000148486.1 | anti-phage deoxyguanosine triphosphatase | - |
| M5T11_RS25700 (M5T11_25700) | 28056..28424 | - | 369 | WP_000339558.1 | hypothetical protein | - |
| M5T11_RS25705 (M5T11_25705) | 28631..28939 | - | 309 | WP_001165937.1 | hypothetical protein | - |
| M5T11_RS25710 (M5T11_25710) | 28929..31916 | - | 2988 | WP_086352859.1 | hypothetical protein | - |
| M5T11_RS25715 (M5T11_25715) | 31929..32294 | - | 366 | WP_000175491.1 | hypothetical protein | - |
| M5T11_RS25720 (M5T11_25720) | 32291..34210 | - | 1920 | WP_086352858.1 | hypothetical protein | - |
| M5T11_RS25725 (M5T11_25725) | 34212..34814 | - | 603 | WP_001345482.1 | hypothetical protein | - |
| M5T11_RS25730 (M5T11_25730) | 34801..35244 | - | 444 | WP_000580776.1 | hypothetical protein | - |
| M5T11_RS25735 (M5T11_25735) | 35241..35570 | - | 330 | WP_000887652.1 | phage holin family protein | - |
| M5T11_RS25740 (M5T11_25740) | 35645..35884 | - | 240 | WP_072258887.1 | phage holin family protein | - |
| M5T11_RS25745 (M5T11_25745) | 36084..36212 | + | 129 | Protein_37 | DNA-invertase | - |
| M5T11_RS25750 (M5T11_25750) | 36344..36916 | - | 573 | WP_001165547.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| M5T11_RS25755 (M5T11_25755) | 36982..37416 | + | 435 | Protein_39 | tail fiber protein | - |
| M5T11_RS25760 (M5T11_25760) | 37427..37903 | + | 477 | WP_064764636.1 | phage tail protein | - |
| M5T11_RS25765 (M5T11_25765) | 37944..38372 | + | 429 | WP_167787542.1 | phage tail protein | - |
| M5T11_RS25770 (M5T11_25770) | 38372..38983 | + | 612 | WP_000367942.1 | tail fiber assembly protein | - |
| M5T11_RS25775 (M5T11_25775) | 38989..39486 | - | 498 | WP_072196854.1 | phage tail protein | - |
| M5T11_RS25780 (M5T11_25780) | 39497..39787 | - | 291 | WP_226474888.1 | hypothetical protein | - |
| M5T11_RS25785 (M5T11_25785) | 40011..40469 | - | 459 | WP_139457952.1 | phage tail protein | - |
| M5T11_RS25790 (M5T11_25790) | 40498..42447 | - | 1950 | WP_259384592.1 | tail fiber protein | - |
| M5T11_RS25795 (M5T11_25795) | 42459..42893 | - | 435 | WP_001286325.1 | hypothetical protein | - |
| M5T11_RS25800 (M5T11_25800) | 42972..43808 | - | 837 | WP_001189832.1 | hypothetical protein | - |
| M5T11_RS25805 (M5T11_25805) | 43808..45241 | - | 1434 | WP_000047924.1 | bleomycin hydrolase | - |
| M5T11_RS25810 (M5T11_25810) | 45238..45594 | - | 357 | WP_000002800.1 | hypothetical protein | - |
| M5T11_RS25815 (M5T11_25815) | 45594..49289 | - | 3696 | WP_089477381.1 | lytic transglycosylase domain-containing protein | - |
| M5T11_RS25820 (M5T11_25820) | 49371..50252 | - | 882 | WP_000926342.1 | hypothetical protein | - |
| M5T11_RS25825 (M5T11_25825) | 50267..50878 | - | 612 | WP_000523980.1 | hypothetical protein | - |
| M5T11_RS25830 (M5T11_25830) | 50889..51455 | - | 567 | WP_000188924.1 | hypothetical protein | - |
| M5T11_RS25835 (M5T11_25835) | 51514..51990 | - | 477 | WP_001220699.1 | hypothetical protein | - |
| M5T11_RS25840 (M5T11_25840) | 52042..52689 | - | 648 | WP_241336521.1 | hypothetical protein | - |
| M5T11_RS25845 (M5T11_25845) | 53115..53336 | + | 222 | WP_000245712.1 | host cell division inhibitor Icd-like protein | - |
| M5T11_RS25850 (M5T11_25850) | 53333..54367 | + | 1035 | WP_047649487.1 | phage antirepressor KilAC domain-containing protein | - |
| M5T11_RS25855 (M5T11_25855) | 54532..55332 | + | 801 | WP_001187875.1 | phage antirepressor KilAC domain-containing protein | - |
| M5T11_RS25860 (M5T11_25860) | 55362..56207 | + | 846 | WP_204638476.1 | helix-turn-helix domain-containing protein | - |
| M5T11_RS25865 (M5T11_25865) | 56258..56503 | + | 246 | WP_023351467.1 | hypothetical protein | - |
| M5T11_RS25870 (M5T11_25870) | 56686..57282 | - | 597 | WP_000268407.1 | hypothetical protein | - |
| M5T11_RS25875 (M5T11_25875) | 57454..57963 | - | 510 | WP_001615627.1 | hypothetical protein | - |
| M5T11_RS25880 (M5T11_25880) | 57975..58439 | - | 465 | WP_001361637.1 | hypothetical protein | - |
| M5T11_RS25885 (M5T11_25885) | 58592..59407 | - | 816 | WP_000041757.1 | hypothetical protein | - |
| M5T11_RS25890 (M5T11_25890) | 59417..61006 | - | 1590 | WP_023351466.1 | hypothetical protein | - |
| M5T11_RS25895 (M5T11_25895) | 61067..62773 | - | 1707 | WP_000067708.1 | hypothetical protein | - |
| M5T11_RS25900 (M5T11_25900) | 62999..64000 | - | 1002 | WP_000038866.1 | ParB family protein | - |
| M5T11_RS25905 (M5T11_25905) | 64017..65213 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| M5T11_RS25910 (M5T11_25910) | 65382..66191 | - | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| M5T11_RS25915 (M5T11_25915) | 66484..67368 | - | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| M5T11_RS25920 (M5T11_25920) | 67703..68095 | - | 393 | WP_001702260.1 | hypothetical protein | - |
| M5T11_RS25925 (M5T11_25925) | 68107..68247 | - | 141 | WP_000336812.1 | hypothetical protein | - |
| M5T11_RS25930 (M5T11_25930) | 68273..68695 | - | 423 | WP_000007769.1 | hypothetical protein | - |
| M5T11_RS25935 (M5T11_25935) | 68735..69523 | - | 789 | WP_000890198.1 | hypothetical protein | - |
| M5T11_RS25940 (M5T11_25940) | 69986..70270 | + | 285 | WP_001177860.1 | hypothetical protein | - |
| M5T11_RS25945 (M5T11_25945) | 70263..71168 | + | 906 | WP_001702258.1 | recombination-associated protein RdgC | - |
| M5T11_RS25950 (M5T11_25950) | 71165..73588 | + | 2424 | WP_089634610.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| M5T11_RS25965 (M5T11_25965) | 75345..75770 | + | 426 | WP_000900640.1 | tellurite/colicin resistance protein | - |
| M5T11_RS25970 (M5T11_25970) | 75770..75934 | + | 165 | WP_000234829.1 | DUF3927 family protein | - |
| M5T11_RS25980 (M5T11_25980) | 76406..77770 | + | 1365 | WP_001276602.1 | replicative DNA helicase | - |
| M5T11_RS25985 (M5T11_25985) | 77770..78768 | + | 999 | WP_045904038.1 | hypothetical protein | - |
| M5T11_RS25990 (M5T11_25990) | 78816..79448 | - | 633 | WP_045904036.1 | hypothetical protein | - |
| M5T11_RS25995 (M5T11_25995) | 79441..80457 | - | 1017 | WP_000212018.1 | hypothetical protein | - |
| M5T11_RS26000 (M5T11_26000) | 80459..81244 | - | 786 | WP_088543869.1 | baseplate | - |
| M5T11_RS26005 (M5T11_26005) | 81231..81959 | - | 729 | WP_000896801.1 | hypothetical protein | - |
| M5T11_RS26010 (M5T11_26010) | 81963..82379 | - | 417 | Protein_87 | phage tail protein | - |
| M5T11_RS26020 (M5T11_26020) | 83686..84492 | - | 807 | Protein_89 | phage tail protein | - |
| M5T11_RS26025 (M5T11_26025) | 84502..84879 | - | 378 | WP_000235786.1 | hypothetical protein | - |
| M5T11_RS26030 (M5T11_26030) | 85026..85271 | + | 246 | WP_000840931.1 | hypothetical protein | - |
| M5T11_RS26035 (M5T11_26035) | 85274..85852 | + | 579 | WP_000943603.1 | VRR-NUC domain-containing protein | - |
| M5T11_RS26040 (M5T11_26040) | 85919..86074 | + | 156 | WP_000096174.1 | hypothetical protein | - |
| M5T11_RS26045 (M5T11_26045) | 86576..87202 | + | 627 | WP_000484116.1 | hypothetical protein | - |
| M5T11_RS26050 (M5T11_26050) | 87199..87876 | + | 678 | WP_053287792.1 | metallophosphoesterase | - |
| M5T11_RS26055 (M5T11_26055) | 87873..88574 | + | 702 | WP_032162337.1 | hypothetical protein | - |
| M5T11_RS26060 (M5T11_26060) | 88876..90138 | + | 1263 | WP_001774489.1 | hypothetical protein | - |
| M5T11_RS26065 (M5T11_26065) | 90211..90717 | + | 507 | WP_060578216.1 | hypothetical protein | - |
| M5T11_RS26070 (M5T11_26070) | 90983..94099 | - | 3117 | WP_072650946.1 | HsdR family type I site-specific deoxyribonuclease | - |
| M5T11_RS26075 (M5T11_26075) | 94221..95477 | - | 1257 | WP_072196859.1 | restriction endonuclease subunit S | - |
| M5T11_RS26080 (M5T11_26080) | 95474..97030 | - | 1557 | WP_060578235.1 | type I restriction-modification system subunit M | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|