MGE detailed information
MGE type: Conjugative plasmid MGE length: 70739 bp
Accession: NZ_CP103757 Location: 1..70739 Organism: Escherichia coli strain p11B Replicon: plasmid unnamed2
Accession: NZ_CP103757 Location: 1..70739 Organism: Escherichia coli strain p11B Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYO14_RS27270 (1) | 1..981 | + | 981 | WP_001218105.1 | plasmid segregation protein ParM | - |
| NYO14_RS27275 (984) | 984..1406 | + | 423 | WP_000774834.1 | plasmid partitioning/stability family protein | - |
| NYO14_RS27280 (1430) | 1430..1720 | + | 291 | WP_072262190.1 | hypothetical protein | - |
| NYO14_RS27285 (1815) | 1815..2717 | + | 903 | WP_077631593.1 | DUF1281 domain-containing protein | - |
| NYO14_RS27290 (2714) | 2714..3025 | + | 312 | WP_032142385.1 | hypothetical protein | - |
| NYO14_RS27295 (3101) | 3101..3784 | + | 684 | WP_016235423.1 | DNA methylase | - |
| NYO14_RS27300 (3785) | 3785..4006 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| NYO14_RS27305 (3936) | 3936..4454 | + | 519 | WP_226147437.1 | DUF1380 family protein | - |
| NYO14_RS27310 (4499) | 4499..5269 | + | 771 | WP_045232994.1 | hypothetical protein | - |
| NYO14_RS27315 (5686) | 5686..6111 | + | 426 | WP_001198895.1 | antirestriction protein | - |
| NYO14_RS27320 (6158) | 6158..6577 | + | 420 | WP_000271737.1 | DUF1380 family protein | - |
| NYO14_RS27325 (6577) | 6577..6768 | + | 192 | WP_001027049.1 | hypothetical protein | - |
| NYO14_RS27330 (6747) | 6747..7215 | - | 469 | Protein_12 | hypothetical protein | - |
| NYO14_RS27335 (7733) | 7733..7963 | + | 231 | WP_000218644.1 | hypothetical protein | - |
| NYO14_RS27340 (8015) | 8015..9376 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| NYO14_RS27345 (9423) | 9423..9986 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| NYO14_RS27350 (10072) | 10072..10530 | - | 459 | WP_024195276.1 | hypothetical protein | - |
| NYO14_RS27355 (10832) | 10832..11359 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| NYO14_RS27360 (11417) | 11417..11650 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| NYO14_RS27365 (11711) | 11711..13675 | + | 1965 | WP_001537566.1 | ParB/RepB/Spo0J family partition protein | - |
| NYO14_RS27370 (13744) | 13744..14178 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| NYO14_RS27375 (14175) | 14175..14894 | + | 720 | WP_001276237.1 | plasmid SOS inhibition protein A | - |
| NYO14_RS27380 (14891) | 14891..15205 | + | 315 | WP_001562885.1 | hypothetical protein | - |
| - (15162) | 15162..15347 | + | 186 | NuclAT_0 | - | - |
| - (15162) | 15162..15347 | + | 186 | NuclAT_0 | - | - |
| - (15162) | 15162..15347 | + | 186 | NuclAT_0 | - | - |
| - (15162) | 15162..15347 | + | 186 | NuclAT_0 | - | - |
| - (15162) | 15162..15347 | - | 186 | NuclAT_0 | - | - |
| NYO14_RS27385 (15355) | 15355..15507 | + | 153 | Protein_23 | FlmC family protein | - |
| NYO14_RS27390 (15452) | 15452..15574 | + | 123 | WP_223200913.1 | Hok/Gef family protein | - |
| NYO14_RS27395 (15875) | 15875..16171 | - | 297 | Protein_25 | hypothetical protein | - |
| NYO14_RS27400 (16471) | 16471..16767 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| NYO14_RS27405 (16878) | 16878..17699 | + | 822 | WP_165696594.1 | DUF932 domain-containing protein | - |
| NYO14_RS27410 (17996) | 17996..18643 | - | 648 | WP_072144024.1 | hypothetical protein | VF |
| NYO14_RS27415 (18919) | 18919..19302 | + | 384 | WP_001151529.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NYO14_RS27420 (19494) | 19494..20141 | + | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| NYO14_RS27425 (20261) | 20261..20488 | + | 228 | WP_000589556.1 | conjugal transfer relaxosome protein TraY | - |
| NYO14_RS27430 (20522) | 20522..20884 | + | 363 | WP_001098993.1 | type IV conjugative transfer system pilin TraA | - |
| NYO14_RS27435 (20899) | 20899..21210 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| NYO14_RS27440 (21232) | 21232..21798 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| NYO14_RS27445 (21785) | 21785..22513 | + | 729 | WP_001230771.1 | type-F conjugative transfer system secretin TraK | - |
| NYO14_RS27450 (22513) | 22513..23964 | + | 1452 | WP_016235429.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NYO14_RS27455 (23954) | 23954..24520 | + | 567 | WP_000896598.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| NYO14_RS27460 (24507) | 24507..24824 | + | 318 | WP_001057297.1 | conjugal transfer protein TrbD | - |
| NYO14_RS27465 (24824) | 24824..25339 | + | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NYO14_RS27470 (25474) | 25474..25695 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| NYO14_RS27475 (25688) | 25688..26101 | + | 414 | WP_000549589.1 | hypothetical protein | - |
| NYO14_RS27480 (26094) | 26094..26567 | + | 474 | WP_016249716.1 | hypothetical protein | - |
| NYO14_RS27485 (26648) | 26648..26866 | + | 219 | WP_000556751.1 | hypothetical protein | - |
| NYO14_RS27490 (26894) | 26894..27241 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| NYO14_RS27495 (27367) | 27367..29997 | + | 2631 | WP_049092012.1 | type IV secretion system protein TraC | - |
| NYO14_RS27500 (29994) | 29994..30380 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| NYO14_RS27505 (30377) | 30377..31009 | + | 633 | WP_001526032.1 | type-F conjugative transfer system protein TraW | - |
| NYO14_RS27510 (31006) | 31006..31998 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| NYO14_RS27515 (32028) | 32028..32333 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| NYO14_RS27520 (32342) | 32342..32980 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NYO14_RS27525 (32977) | 32977..34827 | + | 1851 | WP_032195763.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NYO14_RS27530 (34854) | 34854..35111 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| NYO14_RS27535 (35104) | 35104..35847 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NYO14_RS27540 (35861) | 35861..36202 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| NYO14_RS27545 (36183) | 36183..36518 | - | 336 | WP_001620807.1 | hypothetical protein | - |
| NYO14_RS27550 (36599) | 36599..36883 | + | 285 | WP_042017850.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NYO14_RS27555 (36870) | 36870..37415 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NYO14_RS27560 (37405) | 37405..37719 | + | 315 | WP_001620812.1 | P-type conjugative transfer protein TrbJ | - |
| NYO14_RS27565 (37673) | 37673..38065 | + | 393 | WP_032144618.1 | F-type conjugal transfer protein TrbF | - |
| NYO14_RS27570 (38052) | 38052..39425 | + | 1374 | WP_001535740.1 | conjugal transfer pilus assembly protein TraH | - |
| NYO14_RS27575 (39422) | 39422..42247 | + | 2826 | WP_165696591.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NYO14_RS27580 (42244) | 42244..42753 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| NYO14_RS27585 (42767) | 42767..43498 | + | 732 | WP_042018826.1 | conjugal transfer complement resistance protein TraT | - |
| NYO14_RS27590 (43701) | 43701..44438 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| NYO14_RS27595 (44489) | 44489..46696 | + | 2208 | WP_032362909.1 | type IV conjugative transfer system coupling protein TraD | - |
| NYO14_RS27600 (46696) | 46696..51966 | + | 5271 | WP_097760904.1 | Multifunctional conjugation protein TraI | Relaxase |
| NYO14_RS27605 (51986) | 51986..52732 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| NYO14_RS27610 (52791) | 52791..53651 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| NYO14_RS27615 (53754) | 53754..54314 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| NYO14_RS27620 (54443) | 54443..54655 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| NYO14_RS27625 (54900) | 54900..55361 | + | 462 | WP_016230918.1 | thermonuclease family protein | - |
| NYO14_RS27630 (55407) | 55407..55616 | + | 210 | WP_001369435.1 | hemolysin expression modulator Hha | - |
| NYO14_RS27635 (55654) | 55654..55881 | + | 228 | Protein_73 | hypothetical protein | - |
| NYO14_RS27645 (56652) | 56652..57020 | + | 369 | Protein_75 | DUF2726 domain-containing protein | - |
| NYO14_RS27650 (57260) | 57260..57520 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| NYO14_RS27655 (57744) | 57744..57818 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| NYO14_RS27660 (57811) | 57811..58668 | + | 858 | WP_042018306.1 | incFII family plasmid replication initiator RepA | - |
| NYO14_RS27665 (59582) | 59582..59851 | + | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NYO14_RS27670 (59851) | 59851..60129 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NYO14_RS27675 (60175) | 60175..61023 | + | 849 | WP_016235419.1 | 3'-5' exonuclease | - |
| NYO14_RS27680 (61140) | 61140..61622 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| NYO14_RS27685 (61982) | 61982..63169 | - | 1188 | Protein_83 | IS91 family transposase IS91 | Transposase |
| NYO14_RS27690 (63169) | 63169..63534 | - | 366 | WP_016235422.1 | hypothetical protein | - |
| NYO14_RS27695 (64062) | 64062..64571 | + | 510 | WP_000115001.1 | peptide deformylase | - |
| NYO14_RS27700 (64586) | 64586..64687 | + | 102 | Protein_86 | methionyl-tRNA formyltransferase | - |
| NYO14_RS27705 (64884) | 64884..65075 | + | 192 | WP_000175572.1 | DUF2164 family protein | - |
| NYO14_RS27710 (65072) | 65072..65434 | + | 363 | WP_000181069.1 | hypothetical protein | - |
| NYO14_RS27715 (65767) | 65767..66294 | - | 528 | WP_001196880.1 | DoxX family protein | - |
| NYO14_RS27720 (66296) | 66296..67054 | - | 759 | WP_001181584.1 | DNA-binding domain-containing protein | - |
| NYO14_RS27725 (67023) | 67023..67949 | - | 927 | WP_000989040.1 | DUF692 domain-containing protein | - |
| NYO14_RS27730 (67981) | 67981..68271 | - | 291 | WP_000754127.1 | DUF2282 domain-containing protein | - |
| NYO14_RS27735 (68580) | 68580..69137 | - | 558 | WP_000103553.1 | hypothetical protein | VF |
| NYO14_RS27740 (69785) | 69785..70351 | + | 567 | WP_000587874.1 | hypothetical protein | - |
| NYO14_RS27745 (70419) | 70419..70538 | - | 120 | Protein_95 | transposase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|