MGE detailed information
MGE type: Prophage MGE length: 56586 bp
Accession: NZ_CP103755 Location: 1938276..1994861 Organism: Escherichia coli strain p11B Replicon: chromosome
Accession: NZ_CP103755 Location: 1938276..1994861 Organism: Escherichia coli strain p11B Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYO14_RS09195 (1933717) | 1933717..1933767 | - | 51 | WP_001364200.1 | his operon leader peptide | - |
| NYO14_RS09200 (1934050) | 1934050..1934301 | + | 252 | WP_001259253.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | - |
| NYO14_RS09205 (1934298) | 1934298..1934552 | + | 255 | WP_000767819.1 | type II toxin-antitoxin system mRNA interferase toxin YoeB | - |
| NYO14_RS09210 (1934635) | 1934635..1935459 | + | 825 | WP_000754737.1 | SDR family oxidoreductase | - |
| NYO14_RS09215 (1935505) | 1935505..1936434 | + | 930 | WP_000803366.1 | LysR substrate-binding domain-containing protein | - |
| NYO14_RS09220 (1936649) | 1936649..1936711 | + | 63 | WP_010723108.1 | membrane protein YoeI | - |
| NYO14_RS09225 (1936701) | 1936701..1938059 | + | 1359 | WP_000019194.1 | putrescine/proton symporter PlaP | - |
| NYO14_RS09230 (1938276) | 1938276..1938734 | + | 459 | WP_001531805.1 | IS200-IS605 family transposase IS200C | Transposase |
| NYO14_RS09235 (1938845) | 1938845..1940269 | - | 1425 | WP_001576845.1 | exodeoxyribonuclease I | - |
| NYO14_RS09240 (1940451) | 1940451..1941629 | + | 1179 | WP_029700882.1 | hypothetical protein ; Integrase | Integrase |
| NYO14_RS09245 (1941610) | 1941610..1941801 | - | 192 | WP_000132739.1 | AlpA family phage regulatory protein | - |
| NYO14_RS09250 (1941881) | 1941881..1942225 | - | 345 | WP_029700883.1 | hypothetical protein | - |
| NYO14_RS09255 (1942326) | 1942326..1942505 | - | 180 | WP_001277766.1 | Eag protein | - |
| NYO14_RS09260 (1942602) | 1942602..1943297 | - | 696 | WP_237977494.1 | DUF550 domain-containing protein | - |
| NYO14_RS09265 (1943271) | 1943271..1943399 | - | 129 | Protein_1816 | DUF550 domain-containing protein | - |
| NYO14_RS09270 (1943538) | 1943538..1943729 | - | 192 | WP_029700887.1 | hypothetical protein | - |
| NYO14_RS09275 (1943722) | 1943722..1944318 | - | 597 | WP_029700889.1 | ead/Ea22-like family protein | - |
| NYO14_RS09280 (1944527) | 1944527..1944682 | - | 156 | Protein_1819 | ead/Ea22-like family protein | - |
| NYO14_RS09285 (1944679) | 1944679..1944846 | - | 168 | Protein_1820 | DUF2737 family protein | - |
| NYO14_RS09290 (1944857) | 1944857..1945150 | - | 294 | WP_001111298.1 | DUF2856 family protein | - |
| NYO14_RS09295 (1945174) | 1945174..1945761 | - | 588 | WP_001535902.1 | hypothetical protein | - |
| NYO14_RS09300 (1945758) | 1945758..1946438 | - | 681 | WP_000536247.1 | ATP-binding protein | - |
| NYO14_RS09305 (1946447) | 1946447..1946635 | - | 189 | WP_000613347.1 | hypothetical protein | - |
| NYO14_RS09310 (1946632) | 1946632..1946745 | - | 114 | WP_000372936.1 | host cell division inhibitory peptide Kil | - |
| NYO14_RS09315 (1946714) | 1946714..1946878 | - | 165 | WP_001198861.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| NYO14_RS09320 (1947069) | 1947069..1947539 | - | 471 | WP_029700895.1 | hypothetical protein | - |
| NYO14_RS09325 (1947543) | 1947543..1947794 | - | 252 | WP_128357223.1 | hypothetical protein | - |
| NYO14_RS09330 (1947834) | 1947834..1948457 | - | 624 | WP_029700898.1 | Nmad5 family putative nucleotide modification protein | - |
| NYO14_RS09335 (1948736) | 1948736..1948819 | - | 84 | Protein_1830 | antitermination protein | - |
| NYO14_RS09340 (1949130) | 1949130..1949825 | - | 696 | WP_104460248.1 | LexA family transcriptional regulator | - |
| NYO14_RS09345 (1949901) | 1949901..1950116 | + | 216 | WP_000067728.1 | helix-turn-helix transcriptional regulator | - |
| NYO14_RS09350 (1950233) | 1950233..1950514 | + | 282 | WP_000536663.1 | CII family transcriptional regulator | - |
| NYO14_RS09355 (1950549) | 1950549..1950695 | + | 147 | WP_000166207.1 | DUF2740 family protein | - |
| NYO14_RS09360 (1950688) | 1950688..1951548 | + | 861 | WP_029700901.1 | replication protein | - |
| NYO14_RS09365 (1951656) | 1951656..1953536 | + | 1881 | WP_029700902.1 | toprim domain-containing protein | - |
| NYO14_RS09370 (1953614) | 1953614..1954054 | + | 441 | WP_000736913.1 | recombination protein NinB | - |
| NYO14_RS09375 (1954051) | 1954051..1954227 | + | 177 | WP_001254220.1 | NinE family protein | - |
| NYO14_RS09380 (1954230) | 1954230..1954595 | + | 366 | WP_029700904.1 | DUF2591 family protein | - |
| NYO14_RS09385 (1954588) | 1954588..1954767 | + | 180 | WP_029700905.1 | protein NinF | - |
| NYO14_RS09390 (1954757) | 1954757..1955149 | + | 393 | WP_000237096.1 | hypothetical protein | - |
| NYO14_RS09395 (1955142) | 1955142..1955753 | + | 612 | WP_021571394.1 | recombination protein NinG | - |
| NYO14_RS09400 (1955750) | 1955750..1955956 | + | 207 | WP_000144614.1 | phage NinH family protein | - |
| NYO14_RS09405 (1955934) | 1955934..1956605 | + | 672 | WP_029700907.1 | serine/threonine protein phosphatase | - |
| NYO14_RS09410 (1956596) | 1956596..1957114 | + | 519 | WP_029700909.1 | antiterminator Q family protein | - |
| NYO14_RS09415 (1957579) | 1957579..1957902 | + | 324 | WP_000783734.1 | phage holin, lambda family | - |
| NYO14_RS09420 (1957886) | 1957886..1958362 | + | 477 | WP_000229392.1 | glycoside hydrolase family protein | - |
| NYO14_RS09425 (1958359) | 1958359..1958796 | + | 438 | WP_029700910.1 | lysis protein | - |
| NYO14_RS09430 (1958999) | 1958999..1959541 | + | 543 | WP_004015017.1 | Rha family transcriptional regulator | - |
| NYO14_RS09435 (1959769) | 1959769..1960011 | + | 243 | WP_000807788.1 | DUF2560 family protein | - |
| NYO14_RS09440 (1960014) | 1960014..1960454 | + | 441 | WP_000113732.1 | hypothetical protein | - |
| NYO14_RS09445 (1960451) | 1960451..1961866 | + | 1416 | WP_029700916.1 | PBSX family phage terminase large subunit | - |
| NYO14_RS09450 (1961868) | 1961868..1964066 | + | 2199 | WP_029700917.1 | portal protein | - |
| NYO14_RS09455 (1964157) | 1964157..1965050 | + | 894 | WP_000372575.1 | scaffold protein | - |
| NYO14_RS09460 (1965069) | 1965069..1966322 | + | 1254 | WP_029700919.1 | P22 phage major capsid protein family protein | - |
| NYO14_RS09465 (1966364) | 1966364..1966552 | + | 189 | WP_001389518.1 | hypothetical protein | - |
| NYO14_RS09470 (1966533) | 1966533..1966994 | + | 462 | WP_001140510.1 | packaged DNA stabilization gp4 family protein | - |
| NYO14_RS09475 (1967004) | 1967004..1968422 | + | 1419 | WP_029700923.1 | packaged DNA stabilization protein gp10 | - |
| NYO14_RS09480 (1968422) | 1968422..1969123 | + | 702 | WP_029700925.1 | tail protein | - |
| NYO14_RS09485 (1969123) | 1969123..1969578 | + | 456 | WP_029700927.1 | DUF2824 family protein | - |
| NYO14_RS09490 (1969581) | 1969581..1970273 | + | 693 | WP_000964872.1 | DNA transfer protein | - |
| NYO14_RS09495 (1970284) | 1970284..1971558 | + | 1275 | WP_029700929.1 | DNA transfer protein | - |
| NYO14_RS09500 (1971558) | 1971558..1973666 | + | 2109 | WP_029700931.1 | hypothetical protein | - |
| NYO14_RS09505 (1973691) | 1973691..1974113 | - | 423 | WP_000467047.1 | hypothetical protein | - |
| NYO14_RS09510 (1974241) | 1974241..1974789 | - | 549 | WP_001263856.1 | PIN domain-containing protein | - |
| NYO14_RS09515 (1974780) | 1974780..1975499 | - | 720 | WP_000749484.1 | hypothetical protein | - |
| NYO14_RS09520 (1975549) | 1975549..1975803 | - | 255 | WP_029700933.1 | Arc family DNA-binding protein | - |
| NYO14_RS09525 (1975894) | 1975894..1976052 | + | 159 | WP_001555391.1 | Arc family DNA-binding protein | - |
| NYO14_RS09530 (1976049) | 1976049..1976273 | + | 225 | WP_000868958.1 | hypothetical protein | - |
| NYO14_RS09535 (1976336) | 1976336..1977238 | + | 903 | WP_029700934.1 | phage antirepressor N-terminal domain-containing protein | - |
| NYO14_RS09540 (1977448) | 1977448..1979529 | + | 2082 | WP_050011445.1 | phage tailspike protein | - |
| NYO14_RS09545 (1980323) | 1980323..1981489 | + | 1167 | WP_001296209.1 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| NYO14_RS09550 (1981608) | 1981608..1982081 | + | 474 | WP_001105368.1 | DNA gyrase inhibitor SbmC | - |
| NYO14_RS09555 (1982279) | 1982279..1983337 | + | 1059 | WP_001200889.1 | FUSC family protein | - |
| NYO14_RS09560 (1983509) | 1983509..1983838 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| NYO14_RS09565 (1983939) | 1983939..1984262 | - | 324 | WP_225469267.1 | EutP/PduV family microcompartment system protein | - |
| NYO14_RS09570 (1984241) | 1984241..1984321 | + | 81 | WP_023441679.1 | hypothetical protein | - |
| NYO14_RS09575 (1984610) | 1984610..1984690 | - | 81 | Protein_1878 | hypothetical protein | - |
| NYO14_RS09580 (1984736) | 1984736..1984930 | - | 195 | WP_000988600.1 | DUF5983 family protein | - |
| NYO14_RS09585 (1984927) | 1984927..1985301 | - | 375 | WP_165696580.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| NYO14_RS09590 (1985390) | 1985390..1985758 | - | 369 | WP_001280918.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NYO14_RS09595 (1985774) | 1985774..1986418 | - | 645 | WP_000086752.1 | hypothetical protein | - |
| NYO14_RS09600 (1986437) | 1986437..1986658 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| NYO14_RS09605 (1986721) | 1986721..1987197 | - | 477 | WP_001186200.1 | RadC family protein | - |
| NYO14_RS09610 (1987213) | 1987213..1987686 | - | 474 | WP_001542276.1 | antirestriction protein | - |
| NYO14_RS09615 (1987780) | 1987780..1988025 | - | 246 | WP_001164966.1 | hypothetical protein | - |
| NYO14_RS09620 (1988025) | 1988025..1988843 | - | 819 | WP_001542275.1 | DUF932 domain-containing protein | - |
| NYO14_RS09625 (1989064) | 1989064..1989474 | - | 411 | WP_000846703.1 | hypothetical protein | - |
| NYO14_RS09630 (1989490) | 1989490..1989840 | - | 351 | Protein_1889 | hypothetical protein | - |
| NYO14_RS09635 (1989923) | 1989923..1990669 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| NYO14_RS09640 (1990684) | 1990684..1992225 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| NYO14_RS09645 (1992418) | 1992418..1992753 | - | 336 | Protein_1892 | hypothetical protein | - |
| NYO14_RS09650 (1992889) | 1992889..1993959 | - | 1071 | WP_000102633.1 | patatin-like phospholipase family protein | - |
| NYO14_RS09655 (1993956) | 1993956..1994861 | - | 906 | WP_000203551.1 | diguanylate cyclase regulator RdcB family protein | - |
| NYO14_RS09660 (1994858) | 1994858..1997242 | - | 2385 | WP_001531797.1 | dynamin family protein | - |
| NYO14_RS09665 (1997460) | 1997460..1997894 | - | 435 | WP_001069649.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|