MGE detailed information
MGE type: Prophage MGE length: 96664 bp
Accession: NZ_CP103742 Location: 2760263..2856926 Organism: Escherichia coli O25b:H4-ST131 strain 2822 Replicon: chromosome
Accession: NZ_CP103742 Location: 2760263..2856926 Organism: Escherichia coli O25b:H4-ST131 strain 2822 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5R22_RS13325 (2755410) | 2755410..2756081 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| M5R22_RS13330 (2756081) | 2756081..2757541 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| M5R22_RS13335 (2757617) | 2757617..2758738 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| M5R22_RS13340 (2758787) | 2758787..2760013 | - | 1227 | WP_001545930.1 | peptidase T | - |
| M5R22_RS13345 (2760263) | 2760263..2761399 | + | 1137 | WP_000531594.1 | Flagellar brake protein YcgR | VF |
| M5R22_RS13350 (2761383) | 2761383..2762246 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| M5R22_RS13355 (2762478) | 2762478..2762651 | - | 174 | Protein_2617 | tail fiber assembly protein | - |
| M5R22_RS13360 (2762801) | 2762801..2763469 | + | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| M5R22_RS13365 (2763524) | 2763524..2764108 | - | 585 | WP_000885577.1 | tail fiber assembly protein | - |
| M5R22_RS13370 (2764108) | 2764108..2767134 | - | 3027 | WP_000216487.1 | prophage tail fiber N-terminal domain-containing protein | - |
| M5R22_RS13375 (2767286) | 2767286..2767885 | - | 600 | WP_001610945.1 | D-amino acid dehydrogenase | VF |
| M5R22_RS13380 (2767953) | 2767953..2771645 | - | 3693 | WP_001610944.1 | phage tail protein | - |
| M5R22_RS13385 (2771989) | 2771989..2772570 | - | 582 | WP_001090032.1 | tail assembly protein | - |
| M5R22_RS13390 (2772567) | 2772567..2773310 | - | 744 | WP_000194723.1 | C40 family peptidase | - |
| M5R22_RS13395 (2773321) | 2773321..2774019 | - | 699 | WP_001309428.1 | phage minor tail protein L | - |
| M5R22_RS13400 (2774019) | 2774019..2774348 | - | 330 | WP_000847298.1 | phage tail protein | - |
| M5R22_RS13405 (2774345) | 2774345..2776906 | - | 2562 | WP_001556919.1 | phage tail tape measure protein | - |
| M5R22_RS13410 (2776887) | 2776887..2777300 | - | 414 | WP_000533401.1 | phage tail assembly protein T | - |
| M5R22_RS13415 (2777327) | 2777327..2777758 | - | 432 | WP_001309426.1 | phage minor tail protein G | - |
| M5R22_RS13420 (2777777) | 2777777..2778526 | - | 750 | WP_000235047.1 | phage tail protein | - |
| M5R22_RS13425 (2778534) | 2778534..2778929 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| M5R22_RS13430 (2778926) | 2778926..2779459 | - | 534 | WP_000974996.1 | phage tail protein | - |
| M5R22_RS13435 (2779475) | 2779475..2779828 | - | 354 | WP_001204533.1 | head-tail joining protein | - |
| M5R22_RS13440 (2779821) | 2779821..2780195 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| M5R22_RS13445 (2780247) | 2780247..2781275 | - | 1029 | WP_000522603.1 | major capsid protein | - |
| M5R22_RS13450 (2781333) | 2781333..2781680 | - | 348 | WP_000256814.1 | head decoration protein | - |
| M5R22_RS13455 (2781717) | 2781717..2783222 | - | 1506 | WP_001611311.1 | S49 family peptidase | - |
| M5R22_RS13460 (2783212) | 2783212..2784804 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| M5R22_RS13465 (2784801) | 2784801..2785007 | - | 207 | WP_000258993.1 | gpW family head-tail joining protein | - |
| M5R22_RS13470 (2784991) | 2784991..2786919 | - | 1929 | WP_001610650.1 | phage terminase large subunit family protein | - |
| M5R22_RS13475 (2786891) | 2786891..2787400 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| M5R22_RS13480 (2788015) | 2788015..2788152 | - | 138 | WP_000881609.1 | hypothetical protein | - |
| M5R22_RS13485 (2788359) | 2788359..2788685 | - | 327 | WP_000830178.1 | TonB family protein | - |
| M5R22_RS13490 (2788996) | 2788996..2789463 | - | 468 | WP_032142285.1 | lysis protein | - |
| M5R22_RS13495 (2789466) | 2789466..2789597 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| M5R22_RS13500 (2789612) | 2789612..2789794 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| M5R22_RS13505 (2789951) | 2789951..2790484 | - | 534 | WP_001092866.1 | lysozyme | - |
| M5R22_RS13510 (2791076) | 2791076..2791411 | - | 336 | Protein_2648 | YdfR family protein | - |
| M5R22_RS13515 (2791416) | 2791416..2791631 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| M5R22_RS13520 (2791708) | 2791708..2791953 | - | 246 | WP_001538590.1 | DUF826 domain-containing protein | - |
| M5R22_RS13525 (2791991) | 2791991..2792173 | - | 183 | WP_023143432.1 | DUF1378 family protein | - |
| M5R22_RS13530 (2792310) | 2792310..2792855 | - | 546 | Protein_2652 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| M5R22_RS13535 (2793052) | 2793052..2793213 | + | 162 | WP_001571575.1 | hypothetical protein | - |
| M5R22_RS13540 (2793217) | 2793217..2793849 | - | 633 | WP_001571573.1 | hypothetical protein | - |
| M5R22_RS13545 (2793964) | 2793964..2794362 | - | 399 | WP_001571572.1 | Mor transcription activator family protein | - |
| M5R22_RS13550 (2794334) | 2794334..2794783 | - | 450 | WP_001571571.1 | regulatory protein GemA | - |
| M5R22_RS13555 (2794776) | 2794776..2794991 | - | 216 | WP_000123379.1 | hypothetical protein | - |
| M5R22_RS13560 (2794981) | 2794981..2795211 | - | 231 | WP_000631819.1 | hypothetical protein | - |
| M5R22_RS13565 (2795208) | 2795208..2795891 | - | 684 | WP_000132039.1 | DUF2786 domain-containing protein | - |
| M5R22_RS13570 (2795888) | 2795888..2796103 | - | 216 | WP_000763554.1 | hypothetical protein | - |
| M5R22_RS13575 (2796118) | 2796118..2796414 | - | 297 | WP_001295929.1 | hypothetical protein | - |
| M5R22_RS13580 (2796424) | 2796424..2796696 | - | 273 | WP_001571570.1 | hypothetical protein | - |
| M5R22_RS13585 (2796985) | 2796985..2797515 | - | 531 | WP_001381528.1 | host-nuclease inhibitor Gam family protein | - |
| M5R22_RS13590 (2797543) | 2797543..2797812 | - | 270 | WP_000843446.1 | hypothetical protein | - |
| M5R22_RS13595 (2797815) | 2797815..2798981 | - | 1167 | WP_000960680.1 | AAA family ATPase | - |
| M5R22_RS13600 (2798992) | 2798992..2800761 | - | 1770 | WP_001571569.1 | tRNA-specific 2-thiouridylase MnmA ; Integrase | Integrase |
| M5R22_RS13605 (2800765) | 2800765..2801679 | - | 915 | WP_000533821.1 | DUF3102 domain-containing protein | - |
| M5R22_RS13610 (2801690) | 2801690..2801998 | - | 309 | WP_000049025.1 | helix-turn-helix domain-containing protein | - |
| M5R22_RS13615 (2802051) | 2802051..2802239 | - | 189 | WP_000200153.1 | DNA-binding protein | - |
| M5R22_RS13620 (2802290) | 2802290..2802751 | + | 462 | WP_001571568.1 | helix-turn-helix transcriptional regulator | - |
| M5R22_RS13625 (2802748) | 2802748..2803734 | + | 987 | WP_000031883.1 | hypothetical protein | - |
| M5R22_RS13630 (2803825) | 2803825..2804406 | + | 582 | WP_000907412.1 | hypothetical protein | - |
| M5R22_RS13635 (2804444) | 2804444..2804920 | - | 477 | WP_000149906.1 | ABC transporter ATPase | - |
| M5R22_RS13640 (2805051) | 2805051..2805401 | + | 351 | WP_000793146.1 | putative holin | - |
| M5R22_RS13645 (2805404) | 2805404..2806144 | + | 741 | WP_001104440.1 | transglycosylase SLT domain-containing protein | - |
| M5R22_RS13650 (2806128) | 2806128..2806778 | + | 651 | WP_016234468.1 | hypothetical protein | - |
| M5R22_RS13655 (2806775) | 2806775..2807101 | + | 327 | WP_000175097.1 | membrane protein | - |
| M5R22_RS13660 (2807101) | 2807101..2807412 | + | 312 | WP_000227702.1 | hypothetical protein | - |
| M5R22_RS13665 (2807415) | 2807415..2807957 | + | 543 | WP_016234467.1 | DUF3486 family protein | - |
| M5R22_RS13670 (2807954) | 2807954..2809477 | + | 1524 | WP_016234466.1 | hypothetical protein | - |
| M5R22_RS13675 (2809477) | 2809477..2810970 | + | 1494 | WP_016234465.1 | DUF935 domain-containing protein | - |
| M5R22_RS13680 (2810951) | 2810951..2811772 | + | 822 | WP_000117560.1 | phage minor head protein | - |
| M5R22_RS13685 (2811775) | 2811775..2812233 | + | 459 | WP_000135513.1 | phage virion morphogenesis protein | - |
| M5R22_RS13690 (2812448) | 2812448..2813563 | + | 1116 | WP_001273074.1 | hypothetical protein | - |
| M5R22_RS13695 (2813578) | 2813578..2814531 | + | 954 | WP_001286913.1 | hypothetical protein | - |
| M5R22_RS13700 (2814541) | 2814541..2814879 | + | 339 | WP_000537457.1 | DUF2190 family protein | - |
| M5R22_RS13705 (2814881) | 2814881..2815327 | + | 447 | WP_000271668.1 | DUF1320 domain-containing protein | - |
| M5R22_RS13710 (2815327) | 2815327..2815791 | + | 465 | WP_001101802.1 | Gp37 family protein | - |
| M5R22_RS13715 (2815791) | 2815791..2816042 | + | 252 | WP_000666496.1 | hypothetical protein | - |
| M5R22_RS13720 (2816032) | 2816032..2817459 | + | 1428 | WP_000729833.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| M5R22_RS13725 (2817456) | 2817456..2817980 | + | 525 | WP_162832341.1 | phage major tail tube protein | - |
| M5R22_RS13730 (2817983) | 2817983..2818264 | + | 282 | WP_000110114.1 | hypothetical protein | - |
| M5R22_RS13735 (2818362) | 2818362..2818697 | + | 336 | WP_000084213.1 | phage tail assembly protein | - |
| M5R22_RS13740 (2818855) | 2818855..2821806 | + | 2952 | WP_259429272.1 | phage tail tape measure protein | - |
| M5R22_RS13745 (2821806) | 2821806..2822690 | + | 885 | WP_000458387.1 | phage tail protein | - |
| M5R22_RS13750 (2822690) | 2822690..2822902 | + | 213 | WP_000478224.1 | tail protein X | - |
| M5R22_RS13755 (2822890) | 2822890..2824062 | + | 1173 | WP_001529032.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| M5R22_RS13760 (2824059) | 2824059..2824655 | + | 597 | WP_000148265.1 | phage baseplate assembly protein V | - |
| M5R22_RS13765 (2824710) | 2824710..2825057 | + | 348 | WP_000859116.1 | GPW/gp25 family protein | - |
| M5R22_RS13770 (2825048) | 2825048..2826151 | + | 1104 | WP_001529034.1 | baseplate J/gp47 family protein | - |
| M5R22_RS13775 (2826144) | 2826144..2826722 | + | 579 | WP_000138756.1 | phage tail protein I | - |
| M5R22_RS13780 (2826725) | 2826725..2828617 | + | 1893 | WP_142439172.1 | tail fiber protein | - |
| M5R22_RS13785 (2828624) | 2828624..2829238 | - | 615 | WP_001529037.1 | tail assembly chaperone | - |
| M5R22_RS13790 (2829238) | 2829238..2829720 | - | 483 | WP_001486917.1 | phage tail protein | - |
| M5R22_RS13795 (2829761) | 2829761..2830264 | - | 504 | WP_123454902.1 | phage tail protein | - |
| M5R22_RS13800 (2830336) | 2830336..2830908 | + | 573 | WP_000904922.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| M5R22_RS13805 (2830987) | 2830987..2832408 | - | 1422 | Protein_2707 | DUF1737 domain-containing protein | - |
| M5R22_RS13810 (2832669) | 2832669..2833004 | + | 336 | WP_001443236.1 | anti-adapter protein IraM | - |
| M5R22_RS13815 (2833389) | 2833389..2833586 | - | 198 | WP_000917765.1 | hypothetical protein | - |
| M5R22_RS13820 (2833811) | 2833811..2834365 | - | 555 | WP_000640021.1 | DUF1133 family protein | - |
| M5R22_RS13825 (2834374) | 2834374..2834733 | - | 360 | WP_000904110.1 | RusA family crossover junction endodeoxyribonuclease | - |
| M5R22_RS13830 (2834746) | 2834746..2835792 | - | 1047 | WP_001610645.1 | DUF968 domain-containing protein | - |
| M5R22_RS13835 (2835794) | 2835794..2836072 | - | 279 | WP_032141837.1 | hypothetical protein | - |
| M5R22_RS13840 (2836239) | 2836239..2836394 | - | 156 | WP_001443235.1 | type I toxin-antitoxin system toxin HokD | - |
| M5R22_RS13845 (2837078) | 2837078..2837467 | - | 390 | WP_001556926.1 | hypothetical protein | - |
| M5R22_RS13850 (2837464) | 2837464..2837640 | - | 177 | WP_000753058.1 | hypothetical protein | - |
| M5R22_RS13855 (2837633) | 2837633..2837815 | - | 183 | WP_001224662.1 | hypothetical protein | - |
| M5R22_RS13860 (2837909) | 2837909..2838265 | - | 357 | WP_000403778.1 | hypothetical protein | - |
| M5R22_RS13865 (2838243) | 2838243..2838386 | - | 144 | WP_000207966.1 | hypothetical protein | - |
| M5R22_RS13870 (2838397) | 2838397..2838660 | - | 264 | WP_000224233.1 | hypothetical protein | - |
| M5R22_RS13875 (2838662) | 2838662..2838880 | - | 219 | WP_001610644.1 | DUF4014 family protein | - |
| M5R22_RS13880 (2838913) | 2838913..2839125 | - | 213 | WP_000072553.1 | hypothetical protein | - |
| M5R22_RS13885 (2839231) | 2839231..2839653 | - | 423 | Protein_2723 | DUF977 family protein | - |
| M5R22_RS13890 (2839669) | 2839669..2840439 | - | 771 | WP_000450998.1 | DUF1627 domain-containing protein | - |
| M5R22_RS13895 (2840461) | 2840461..2841207 | - | 747 | WP_000788950.1 | IS21 family transposase ISAba8 | Transposase |
| M5R22_RS13900 (2841214) | 2841214..2842176 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| M5R22_RS13905 (2842199) | 2842199..2842624 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| M5R22_RS13910 (2842621) | 2842621..2842923 | - | 303 | WP_001556930.1 | transcriptional regulator | - |
| M5R22_RS13915 (2843021) | 2843021..2843392 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| M5R22_RS13920 (2843413) | 2843413..2843604 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| M5R22_RS13925 (2843606) | 2843606..2843884 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M5R22_RS13930 (2844175) | 2844175..2844327 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| M5R22_RS13935 (2844339) | 2844339..2844677 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| M5R22_RS13940 (2844666) | 2844666..2844860 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| M5R22_RS13945 (2845436) | 2845436..2845624 | + | 189 | WP_000449175.1 | cell division inhibition protein DicB | - |
| M5R22_RS13950 (2845621) | 2845621..2845809 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| M5R22_RS13955 (2845902) | 2845902..2848340 | + | 2439 | WP_000102132.1 | exonuclease | - |
| M5R22_RS13960 (2848402) | 2848402..2848671 | + | 270 | WP_000003742.1 | excisionase | - |
| M5R22_RS13965 (2848640) | 2848640..2849758 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| M5R22_RS13970 (2849925) | 2849925..2850719 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| M5R22_RS13975 (2850716) | 2850716..2851762 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| M5R22_RS13980 (2851820) | 2851820..2852281 | + | 462 | WP_001295970.1 | DUF3592 domain-containing protein | - |
| M5R22_RS13985 (2852278) | 2852278..2853066 | + | 789 | WP_000720215.1 | TPM domain-containing protein | - |
| M5R22_RS13990 (2853204) | 2853204..2854025 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| M5R22_RS13995 (2854041) | 2854041..2854952 | - | 912 | WP_000291272.1 | N-acetylglucosamine kinase | - |
| M5R22_RS14000 (2854981) | 2854981..2856225 | - | 1245 | WP_023141434.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| M5R22_RS14005 (2856225) | 2856225..2856926 | - | 702 | WP_001033695.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| M5R22_RS14010 (2856919) | 2856919..2858118 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| M5R22_RS14015 (2858379) | 2858379..2859452 | + | 1074 | WP_000810241.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|