MGE detailed information
MGE type: Prophage MGE length: 109780 bp
Accession: NZ_CP103739 Location: 2271345..2381124 Organism: Escherichia coli strain 3359 Replicon: chromosome
Accession: NZ_CP103739 Location: 2271345..2381124 Organism: Escherichia coli strain 3359 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T33_RS11220 (2266558) | 2266558..2267346 | + | 789 | WP_000690229.1 | sugar phosphate isomerase/epimerase | - |
| M5T33_RS11225 (2267356) | 2267356..2268411 | + | 1056 | WP_001300711.1 | Gfo/Idh/MocA family oxidoreductase | - |
| M5T33_RS11230 (2268408) | 2268408..2270675 | + | 2268 | WP_000198035.1 | kojibiose phosphorylase | - |
| M5T33_RS11235 (2270672) | 2270672..2271331 | + | 660 | WP_000775794.1 | beta-phosphoglucomutase | - |
| M5T33_RS11240 (2271345) | 2271345..2272427 | + | 1083 | WP_000057985.1 | hypothetical protein | VF |
| M5T33_RS11245 (2272472) | 2272472..2273377 | + | 906 | WP_000735257.1 | monomeric porin OmpG | - |
| M5T33_RS11250 (2273488) | 2273488..2274486 | - | 999 | WP_000075375.1 | LacI family DNA-binding transcriptional regulator | - |
| M5T33_RS11255 (2274642) | 2274642..2276039 | + | 1398 | WP_000825775.1 | YcjX family protein | - |
| M5T33_RS11260 (2276036) | 2276036..2277097 | + | 1062 | WP_000138728.1 | YcjF family protein | - |
| M5T33_RS11265 (2277245) | 2277245..2278786 | + | 1542 | WP_001300658.1 | hypothetical protein | VF |
| M5T33_RS11270 (2278830) | 2278830..2279336 | - | 507 | WP_000084387.1 | thiol peroxidase | - |
| M5T33_RS11275 (2279455) | 2279455..2280420 | + | 966 | WP_001261211.1 | L-Ala-D/L-Glu epimerase | - |
| M5T33_RS11280 (2280395) | 2280395..2281123 | - | 729 | WP_000219122.1 | murein tripeptide amidase MpaA | - |
| M5T33_RS11285 (2281250) | 2281250..2281387 | - | 138 | Protein_2190 | NAD-dependent dehydratase | - |
| M5T33_RS11290 (2281458) | 2281458..2282378 | - | 921 | WP_001300523.1 | alpha/beta hydrolase | - |
| M5T33_RS11295 (2282516) | 2282516..2283415 | + | 900 | WP_000817708.1 | hypothetical protein | VF |
| M5T33_RS11300 (2283752) | 2283752..2285365 | + | 1614 | WP_000683020.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| M5T33_RS11305 (2285416) | 2285416..2286447 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| M5T33_RS11310 (2286691) | 2286691..2286948 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| M5T33_RS11315 (2286998) | 2286998..2287948 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| M5T33_RS11320 (2288100) | 2288100..2288852 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| M5T33_RS11325 (2289047) | 2289047..2289562 | - | 516 | WP_000945011.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| M5T33_RS11330 (2289573) | 2289573..2291099 | - | 1527 | WP_000062973.1 | p-aminobenzoyl-glutamate transporter | - |
| M5T33_RS11335 (2291136) | 2291136..2292581 | - | 1446 | WP_001156451.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| M5T33_RS11340 (2292581) | 2292581..2293891 | - | 1311 | WP_000444928.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| M5T33_RS11345 (2294067) | 2294067..2294975 | + | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| M5T33_RS11350 (2295305) | 2295305..2295868 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| M5T33_RS11355 (2295889) | 2295889..2297121 | - | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| M5T33_RS11360 (2297315) | 2297315..2297362 | + | 48 | WP_211180494.1 | protein YnaN | - |
| M5T33_RS11365 (2297376) | 2297376..2298359 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| M5T33_RS11370 (2298837) | 2298837..2300210 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| M5T33_RS11375 (2300339) | 2300339..2301274 | - | 936 | WP_001157376.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| M5T33_RS11380 (2301326) | 2301326..2302561 | - | 1236 | WP_000040843.1 | hypothetical protein ; Integrase | Integrase |
| M5T33_RS11385 (2302563) | 2302563..2302778 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (2302882) | 2302882..2303060 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2302882) | 2302882..2303060 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2302882) | 2302882..2303060 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2302882) | 2302882..2303060 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| M5T33_RS11390 (2302878) | 2302878..2303066 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| M5T33_RS11395 (2303059) | 2303059..2303253 | - | 195 | WP_072130784.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| M5T33_RS11400 (2303310) | 2303310..2304143 | - | 834 | WP_000166322.1 | recombination protein RecT | - |
| M5T33_RS11405 (2304136) | 2304136..2306736 | - | 2601 | WP_000105131.1 | exodeoxyribonuclease VIII | - |
| M5T33_RS11410 (2306838) | 2306838..2307113 | - | 276 | WP_000632297.1 | protein RacC | - |
| M5T33_RS11415 (2307188) | 2307188..2307358 | - | 171 | WP_002431205.1 | YdaE family protein | - |
| M5T33_RS11420 (2307358) | 2307358..2307579 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| M5T33_RS11425 (2308021) | 2308021..2308509 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| M5T33_RS11430 (2308506) | 2308506..2308661 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| M5T33_RS11435 (2308672) | 2308672..2308806 | - | 135 | WP_000233809.1 | phage protein | - |
| M5T33_RS11440 (2309088) | 2309088..2309426 | - | 339 | WP_001420344.1 | S24 family peptidase | - |
| M5T33_RS11445 (2309818) | 2309818..2310061 | + | 244 | Protein_2222 | Cro/CI family transcriptional regulator | - |
| M5T33_RS11450 (2310045) | 2310045..2310470 | + | 426 | WP_000693842.1 | toxin YdaT family protein | - |
| M5T33_RS11455 (2310542) | 2310542..2311612 | + | 1071 | WP_001262359.1 | hypothetical protein | - |
| M5T33_RS11460 (2311653) | 2311653..2312075 | + | 423 | WP_001151151.1 | DUF977 family protein | - |
| M5T33_RS11465 (2312304) | 2312304..2312750 | - | 447 | WP_000818068.1 | TetR/AcrR family transcriptional regulator | - |
| M5T33_RS11470 (2313052) | 2313052..2314032 | + | 981 | WP_016245323.1 | adenosine deaminase | - |
| M5T33_RS11475 (2314029) | 2314029..2314583 | + | 555 | WP_001026099.1 | non-canonical purine NTP pyrophosphatase | - |
| M5T33_RS11480 (2314583) | 2314583..2315377 | + | 795 | WP_000436711.1 | SIR2 family protein | - |
| M5T33_RS11485 (2316140) | 2316140..2316478 | - | 339 | WP_000149055.1 | DUF1971 domain-containing protein | - |
| M5T33_RS11490 (2317292) | 2317292..2317891 | + | 600 | WP_000940318.1 | DUF1367 family protein | - |
| M5T33_RS11495 (2317891) | 2317891..2318181 | + | 291 | WP_000247622.1 | DUF1364 domain-containing protein | - |
| M5T33_RS11500 (2318178) | 2318178..2318720 | + | 543 | WP_000640139.1 | DUF1133 family protein | - |
| M5T33_RS11515 (2319390) | 2319390..2320552 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| M5T33_RS11520 (2320614) | 2320614..2321546 | + | 933 | WP_001204037.1 | hypothetical protein | - |
| M5T33_RS11525 (2321524) | 2321524..2321733 | + | 210 | WP_000126788.1 | hypothetical protein | - |
| M5T33_RS11530 (2321737) | 2321737..2322831 | + | 1095 | WP_000089447.1 | terminase small subunit | - |
| M5T33_RS11535 (2322812) | 2322812..2324113 | + | 1302 | WP_016245326.1 | terminase family protein | - |
| M5T33_RS11540 (2324116) | 2324116..2325522 | + | 1407 | WP_000763704.1 | DUF4055 domain-containing protein | - |
| M5T33_RS11545 (2325506) | 2325506..2326618 | + | 1113 | WP_001351715.1 | phage minor head protein | - |
| M5T33_RS11550 (2326723) | 2326723..2327486 | + | 764 | Protein_2241 | hypothetical protein | - |
| M5T33_RS11555 (2327585) | 2327585..2328724 | + | 1140 | WP_000918486.1 | P22 phage major capsid protein family protein | - |
| M5T33_RS11560 (2328767) | 2328767..2328943 | + | 177 | WP_251292863.1 | hypothetical protein | - |
| M5T33_RS11565 (2328947) | 2328947..2329342 | + | 396 | WP_000634212.1 | hypothetical protein | - |
| M5T33_RS11570 (2329342) | 2329342..2329725 | + | 384 | WP_000524259.1 | hypothetical protein | - |
| M5T33_RS11575 (2329726) | 2329726..2330106 | + | 381 | WP_001029819.1 | hypothetical protein | - |
| M5T33_RS11580 (2330103) | 2330103..2330495 | + | 393 | WP_000144680.1 | phage tail terminator-like protein | - |
| M5T33_RS11585 (2330522) | 2330522..2331484 | + | 963 | WP_000094292.1 | phage tail tube protein | - |
| M5T33_RS11590 (2331635) | 2331635..2331994 | + | 360 | WP_122988492.1 | protein YdaY | - |
| M5T33_RS11595 (2332069) | 2332069..2332302 | + | 234 | WP_001312809.1 | hypothetical protein | - |
| M5T33_RS11600 (2332466) | 2332466..2335699 | + | 3234 | WP_000840623.1 | phage tail tape measure protein | - |
| M5T33_RS11605 (2335692) | 2335692..2336030 | + | 339 | WP_000024051.1 | phage tail protein | - |
| M5T33_RS11610 (2336030) | 2336030..2336728 | + | 699 | WP_001152433.1 | phage minor tail protein L | - |
| M5T33_RS11615 (2336734) | 2336734..2337477 | + | 744 | WP_002431209.1 | C40 family peptidase | - |
| M5T33_RS11620 (2337375) | 2337375..2338022 | + | 648 | WP_032156414.1 | tail assembly protein | - |
| M5T33_RS11625 (2338083) | 2338083..2341586 | + | 3504 | WP_106108509.1 | host specificity protein J | - |
| M5T33_RS11630 (2341597) | 2341597..2343135 | - | 1539 | WP_000099202.1 | IS66 family transposase ISEc22 | Transposase |
| M5T33_RS11635 (2343184) | 2343184..2343531 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| M5T33_RS11640 (2343528) | 2343528..2343932 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| M5T33_RS11645 (2344092) | 2344092..2344691 | + | 600 | WP_016245270.1 | hypothetical protein | VF |
| M5T33_RS11650 (2344756) | 2344756..2346330 | + | 1575 | Protein_2261 | prophage tail fiber N-terminal domain-containing protein | - |
| M5T33_RS11655 (2346658) | 2346658..2347638 | + | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| M5T33_RS11660 (2347848) | 2347848..2348327 | + | 480 | WP_259431158.1 | hypothetical protein | - |
| M5T33_RS11665 (2348324) | 2348324..2348605 | + | 282 | WP_000654150.1 | hypothetical protein | - |
| M5T33_RS11670 (2348615) | 2348615..2349319 | + | 705 | WP_000235976.1 | tail fiber domain-containing protein | - |
| M5T33_RS11675 (2349330) | 2349330..2349623 | + | 294 | WP_000355603.1 | hypothetical protein | - |
| M5T33_RS11680 (2349643) | 2349643..2349753 | + | 111 | Protein_2267 | tail fiber assembly protein | - |
| M5T33_RS11685 (2349851) | 2349851..2350441 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| M5T33_RS11690 (2350758) | 2350758..2350991 | - | 234 | WP_000836760.1 | cold shock protein YdfK | - |
| M5T33_RS11695 (2351060) | 2351060..2351173 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| M5T33_RS11700 (2351513) | 2351513..2351686 | + | 174 | WP_001157925.1 | hypothetical protein | - |
| M5T33_RS11705 (2351952) | 2351952..2352386 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| M5T33_RS11710 (2352598) | 2352598..2353826 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| M5T33_RS11715 (2353845) | 2353845..2354978 | - | 1134 | WP_000837921.1 | porin OmpN | - |
| M5T33_RS11720 (2355345) | 2355345..2358869 | - | 3525 | WP_000628243.1 | pyruvate:ferredoxin (flavodoxin) oxidoreductase | - |
| M5T33_RS11725 (2359143) | 2359143..2359409 | + | 267 | WP_001295715.1 | DUF333 domain-containing protein | - |
| M5T33_RS11730 (2359406) | 2359406..2359828 | - | 423 | WP_001298828.1 | heat shock protein HslJ | - |
| M5T33_RS11735 (2359939) | 2359939..2360928 | - | 990 | WP_000762236.1 | D-lactate dehydrogenase | - |
| M5T33_RS11740 (2361136) | 2361136..2363775 | + | 2640 | WP_112929647.1 | YdbH family protein | - |
| M5T33_RS11745 (2363772) | 2363772..2363957 | + | 186 | WP_000698145.1 | YnbE family lipoprotein | - |
| M5T33_RS11750 (2363965) | 2363965..2364291 | + | 327 | WP_001300734.1 | YdbL family protein | - |
| M5T33_RS11755 (2364463) | 2364463..2365368 | - | 906 | WP_001067519.1 | transcriptional regulator FeaR | - |
| M5T33_RS11760 (2365604) | 2365604..2367103 | + | 1500 | WP_000138617.1 | phenylacetaldehyde dehydrogenase | - |
| M5T33_RS11765 (2367161) | 2367161..2368759 | - | 1599 | Protein_2284 | primary-amine oxidase | - |
| M5T33_RS11770 (2368825) | 2368825..2369987 | + | 1163 | WP_099554595.1 | IS3 family transposase IS3 | Transposase |
| M5T33_RS11775 (2370018) | 2370018..2370695 | - | 678 | Protein_2286 | stalk domain-containing protein | - |
| M5T33_RS11780 (2370943) | 2370943..2371497 | - | 555 | Protein_2287 | MaoC/PaaZ C-terminal domain-containing protein | - |
| M5T33_RS11785 (2371497) | 2371497..2372231 | + | 735 | Protein_2288 | 3-hydroxyacyl-CoA dehydrogenase family protein | - |
| M5T33_RS11790 (2372221) | 2372221..2372643 | + | 423 | WP_000018413.1 | hydroxyphenylacetyl-CoA thioesterase PaaI | - |
| M5T33_RS11795 (2372643) | 2372643..2373848 | + | 1206 | WP_001206199.1 | bifunctional 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase | - |
| M5T33_RS11800 (2373875) | 2373875..2375188 | + | 1314 | WP_000632277.1 | phenylacetate--CoA ligase PaaK | - |
| M5T33_RS11805 (2375289) | 2375289..2376239 | + | 951 | WP_000039887.1 | phenylacetic acid degradation operon negative regulatory protein PaaX | - |
| M5T33_RS11810 (2376221) | 2376221..2376811 | + | 591 | WP_001123464.1 | hypothetical protein | VF |
| M5T33_RS11815 (2376915) | 2376915..2376980 | - | 66 | WP_010723099.1 | hypothetical protein | - |
| M5T33_RS11820 (2377142) | 2377142..2380393 | + | 3252 | WP_259431159.1 | hypothetical protein | - |
| M5T33_RS11825 (2380427) | 2380427..2381124 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| M5T33_RS11830 (2381142) | 2381142..2382644 | + | 1503 | Protein_2297 | DUF2773 domain-containing protein | - |
| M5T33_RS11835 (2382815) | 2382815..2383420 | + | 606 | WP_000177526.1 | CDP-alcohol phosphatidyltransferase family protein | - |
| M5T33_RS11840 (2383420) | 2383420..2384316 | + | 897 | WP_000890939.1 | phosphatidate cytidylyltransferase | - |
| M5T33_RS11845 (2384332) | 2384332..2386089 | + | 1758 | WP_000431839.1 | bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|