MGE detailed information
MGE type: Genomic_island MGE length: 17734 bp
Accession: NZ_CP103694 Location: 3961846..3979579 Organism: Escherichia coli strain ST12468 Replicon: chromosome
Accession: NZ_CP103694 Location: 3961846..3979579 Organism: Escherichia coli strain ST12468 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T31_RS19430 (3958377) | 3958377..3959102 | - | 726 | WP_000066581.1 | type 1 fimbria chaperone FimC | - |
| M5T31_RS19435 (3959139) | 3959139..3959677 | - | 539 | Protein_3803 | type 1 fimbrial protein | - |
| M5T31_RS19440 (3959742) | 3959742..3960290 | - | 549 | WP_000695574.1 | type 1 fimbrial major subunit FimA | - |
| M5T31_RS19445 (3960772) | 3960772..3961368 | - | 597 | WP_000044700.1 | type 1 fimbria switch DNA invertase FimE | - |
| M5T31_RS19450 (3961846) | 3961846..3962448 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| M5T31_RS19455 (3963410) | 3963410..3964390 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| M5T31_RS19460 (3965093) | 3965093..3965809 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| M5T31_RS19465 (3965829) | 3965829..3966935 | + | 1107 | WP_001299704.1 | N-acetylneuraminate epimerase | - |
| M5T31_RS19470 (3967000) | 3967000..3967980 | + | 981 | WP_000991455.1 | sialate O-acetylesterase | - |
| M5T31_RS19475 (3968090) | 3968090..3968295 | + | 206 | Protein_3811 | HNH endonuclease | - |
| M5T31_RS19480 (3968563) | 3968563..3969803 | - | 1241 | Protein_3812 | helicase YjhR | - |
| M5T31_RS19485 (3969919) | 3969919..3970050 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| M5T31_RS19490 (3970541) | 3970541..3970798 | + | 258 | WP_001054375.1 | YjhX family toxin | Toxin Detail |
| M5T31_RS19495 (3970810) | 3970810..3971355 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| M5T31_RS19500 (3971411) | 3971411..3972157 | + | 747 | WP_058905772.1 | class I SAM-dependent methyltransferase | - |
| M5T31_RS19505 (3972326) | 3972326..3972544 | + | 219 | Protein_3817 | hypothetical protein | - |
| M5T31_RS19510 (3972582) | 3972582..3972698 | + | 117 | Protein_3818 | VOC family protein | - |
| M5T31_RS19515 (3972943) | 3972943..3974064 | + | 1122 | WP_000010831.1 | M42 family metallopeptidase | - |
| M5T31_RS19520 (3974061) | 3974061..3974339 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| M5T31_RS19525 (3974351) | 3974351..3975664 | + | 1314 | WP_000460845.1 | PTS sugar transporter subunit IIC SgcC | - |
| M5T31_RS19530 (3975677) | 3975677..3976483 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| M5T31_RS19535 (3976614) | 3976614..3977045 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| M5T31_RS19540 (3977057) | 3977057..3977689 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| M5T31_RS19545 (3977706) | 3977706..3978488 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| M5T31_RS19550 (3978791) | 3978791..3979579 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| M5T31_RS19555 (3979584) | 3979584..3980489 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| M5T31_RS19560 (3980500) | 3980500..3982467 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| M5T31_RS19565 (3982574) | 3982574..3983923 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|