MGE detailed information
MGE type: Genomic_island MGE length: 13587 bp
Accession: NZ_CP103694 Location: 2298303..2311889 Organism: Escherichia coli strain ST12468 Replicon: chromosome
Accession: NZ_CP103694 Location: 2298303..2311889 Organism: Escherichia coli strain ST12468 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T31_RS11310 (2298303) | 2298303..2298569 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| M5T31_RS11315 (2298569) | 2298569..2299891 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| M5T31_RS11320 (2300203) | 2300203..2300411 | + | 209 | Protein_2215 | AraC family transcriptional regulator | - |
| M5T31_RS11325 (2300666) | 2300666..2301892 | + | 1227 | Protein_2216 | hypothetical protein | VF |
| M5T31_RS11330 (2301906) | 2301906..2302436 | + | 531 | WP_000876763.1 | hypothetical protein | VF |
| M5T31_RS11335 (2302449) | 2302449..2302799 | + | 351 | Protein_2218 | hypothetical protein | VF |
| M5T31_RS11340 (2302858) | 2302858..2303555 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| M5T31_RS11345 (2303571) | 2303571..2303729 | + | 159 | Protein_2220 | type 1 fimbrial protein | - |
| M5T31_RS11350 (2303788) | 2303788..2304702 | + | 915 | WP_058905819.1 | hypothetical protein | VF |
| M5T31_RS11355 (2305036) | 2305036..2307315 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| M5T31_RS11360 (2307563) | 2307563..2307760 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| M5T31_RS11365 (2307835) | 2307835..2308596 | + | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| M5T31_RS11370 (2308998) | 2308998..2310680 | + | 1683 | WP_001515303.1 | sulfatase | - |
| M5T31_RS11375 (2310732) | 2310732..2311889 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| M5T31_RS11380 (2311855) | 2311855..2311977 | - | 123 | WP_120795387.1 | protein YneP | - |
| M5T31_RS11385 (2312180) | 2312180..2313865 | + | 1686 | WP_024238759.1 | ABC transporter ATP-binding protein/permease | - |
| M5T31_RS11390 (2313903) | 2313903..2316275 | + | 2373 | WP_024238758.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.008 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.007 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.008 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.008 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.008 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.008 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.008 |