MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 68912 bp
Accession: NZ_CP103673 Location: 4058108..4127019 Organism: Escherichia coli strain 4069 Replicon: chromosome
Accession: NZ_CP103673 Location: 4058108..4127019 Organism: Escherichia coli strain 4069 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M4U10_RS19255 (4053409) | 4053409..4054665 | + | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
| M4U10_RS19260 (4054714) | 4054714..4056849 | - | 2136 | WP_000839790.1 | ornithine decarboxylase | - |
| M4U10_RS19265 (4057012) | 4057012..4057089 | - | 78 | WP_212734103.1 | hypothetical protein | - |
| M4U10_RS19270 (4057242) | 4057242..4057949 | + | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| M4U10_RS19280 (4058328) | 4058328..4059593 | + | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| M4U10_RS19285 (4059849) | 4059849..4060892 | + | 1044 | WP_000147018.1 | hypothetical protein | - |
| M4U10_RS19290 (4061422) | 4061422..4062119 | + | 698 | WP_223216377.1 | IS1 family transposase IS1R | Transposase |
| M4U10_RS19295 (4062136) | 4062136..4062927 | + | 792 | Protein_3772 | IS3 family transposase | - |
| M4U10_RS19300 (4063094) | 4063094..4063645 | + | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| M4U10_RS19310 (4064952) | 4064952..4066451 | - | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| M4U10_RS19315 (4066526) | 4066526..4068895 | - | 2370 | WP_000671170.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| M4U10_RS19320 (4069000) | 4069000..4070469 | - | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| M4U10_RS19325 (4070722) | 4070722..4071415 | + | 694 | Protein_3778 | IS1 family transposase IS1N | Transposase |
| M4U10_RS19330 (4072033) | 4072033..4072377 | + | 345 | Protein_3779 | alcohol dehydrogenase catalytic domain-containing protein | - |
| M4U10_RS19335 (4072450) | 4072450..4072707 | + | 258 | Protein_3780 | IS3 family transposase IS911 | Transposase |
| M4U10_RS19340 (4072720) | 4072720..4072893 | - | 174 | Protein_3781 | hypothetical protein | - |
| M4U10_RS19345 (4072905) | 4072905..4073384 | - | 480 | Protein_3782 | IS3 family transposase IS629 | Transposase |
| M4U10_RS19350 (4073468) | 4073468..4073809 | - | 342 | Protein_3783 | group II intron reverse transcriptase/maturase | - |
| M4U10_RS19355 (4073958) | 4073958..4074938 | - | 981 | WP_065304412.1 | IS5 family transposase ISKpn26 | Transposase |
| M4U10_RS19360 (4075007) | 4075007..4075081 | - | 75 | Protein_3785 | hypothetical protein | VF |
| M4U10_RS19365 (4075078) | 4075078..4075257 | - | 180 | Protein_3786 | hypothetical protein | VF |
| M4U10_RS19370 (4075309) | 4075309..4075495 | - | 187 | Protein_3787 | hypothetical protein | - |
| M4U10_RS19375 (4075651) | 4075651..4077396 | - | 1746 | WP_001564039.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| M4U10_RS19380 (4077539) | 4077539..4077799 | - | 261 | Protein_3789 | IS3 family transposase ISLad1 | Transposase |
| M4U10_RS19385 (4078520) | 4078520..4078711 | + | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| M4U10_RS19390 (4078764) | 4078764..4078997 | - | 234 | WP_000124185.1 | hypothetical protein | - |
| M4U10_RS19395 (4079093) | 4079093..4079593 | - | 501 | Protein_3792 | DNA-binding protein | - |
| M4U10_RS19400 (4079950) | 4079950..4081068 | + | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| M4U10_RS19405 (4081208) | 4081208..4081894 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| M4U10_RS19410 (4081949) | 4081949..4082707 | + | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| M4U10_RS19415 (4082691) | 4082691..4083416 | + | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| M4U10_RS19420 (4083428) | 4083428..4083697 | + | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| M4U10_RS19425 (4083725) | 4083725..4084222 | + | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| M4U10_RS19430 (4084251) | 4084251..4085447 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| M4U10_RS19435 (4085732) | 4085732..4086013 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| M4U10_RS19440 (4086035) | 4086035..4086820 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| M4U10_RS19445 (4086881) | 4086881..4088398 | + | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| M4U10_RS19450 (4088422) | 4088422..4088721 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| M4U10_RS19455 (4088732) | 4088732..4089307 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| M4U10_RS19460 (4089356) | 4089356..4091908 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| M4U10_RS19465 (4092017) | 4092017..4092934 | + | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| M4U10_RS19470 (4093071) | 4093071..4093976 | + | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| M4U10_RS19475 (4094462) | 4094462..4095001 | + | 540 | WP_001564045.1 | hypothetical protein | - |
| M4U10_RS19480 (4095029) | 4095029..4095550 | + | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| M4U10_RS19485 (4096133) | 4096133..4097395 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| M4U10_RS19490 (4097412) | 4097412..4098467 | + | 1056 | WP_001564046.1 | HTH-type transcriptional activator RhaR | VF |
| M4U10_RS19495 (4098596) | 4098596..4099747 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| M4U10_RS19500 (4099792) | 4099792..4100337 | + | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| M4U10_RS19505 (4100694) | 4100694..4100879 | - | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| M4U10_RS19510 (4101010) | 4101010..4101681 | - | 672 | WP_223350500.1 | TetR/AcrR family transcriptional regulator | - |
| M4U10_RS19515 (4101781) | 4101781..4102938 | - | 1158 | Protein_3816 | Multidrug resistance protein MexB | VF |
| M4U10_RS19520 (4103029) | 4103029..4103295 | + | 267 | Protein_3817 | IS3 family transposase IS2 | Transposase |
| M4U10_RS19525 (4103281) | 4103281..4103343 | - | 63 | Protein_3818 | IS3 family transposase IS2 | Transposase |
| M4U10_RS19530 (4103472) | 4103472..4103597 | - | 126 | WP_001342704.1 | hypothetical protein | - |
| M4U10_RS19535 (4103594) | 4103594..4103827 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| M4U10_RS19540 (4103896) | 4103896..4104471 | - | 576 | WP_001564054.1 | hypothetical protein | - |
| M4U10_RS19545 (4104729) | 4104729..4105295 | - | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| M4U10_RS19550 (4106596) | 4106596..4107690 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| M4U10_RS19555 (4107709) | 4107709..4108959 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| M4U10_RS19560 (4109043) | 4109043..4109978 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| M4U10_RS19565 (4109971) | 4109971..4110906 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| M4U10_RS19570 (4111232) | 4111232..4111612 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| M4U10_RS19575 (4111609) | 4111609..4111956 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| M4U10_RS19580 (4112006) | 4112006..4113544 | + | 1539 | WP_001550332.1 | IS66 family transposase ISEc8 | Transposase |
| M4U10_RS19585 (4113892) | 4113892..4114344 | - | 453 | WP_000558152.1 | acyltransferase | - |
| M4U10_RS19590 (4114865) | 4114865..4115596 | - | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| M4U10_RS19595 (4116266) | 4116266..4116796 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| M4U10_RS19600 (4117959) | 4117959..4119182 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| M4U10_RS19605 (4119283) | 4119283..4120167 | + | 885 | WP_001564055.1 | YfjP family GTPase | - |
| M4U10_RS19610 (4120370) | 4120370..4121050 | + | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| M4U10_RS19615 (4121201) | 4121201..4121878 | + | 678 | WP_001564058.1 | hypothetical protein | - |
| M4U10_RS19620 (4121884) | 4121884..4122117 | + | 234 | WP_001278293.1 | DUF905 family protein | - |
| M4U10_RS19625 (4122207) | 4122207..4123025 | + | 819 | WP_001175165.1 | DUF932 domain-containing protein | - |
| M4U10_RS19630 (4123291) | 4123291..4123770 | + | 480 | WP_001564060.1 | antirestriction protein | - |
| M4U10_RS19635 (4123786) | 4123786..4124262 | + | 477 | WP_021553055.1 | RadC family protein | - |
| M4U10_RS19640 (4124327) | 4124327..4124548 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| M4U10_RS19645 (4124711) | 4124711..4125079 | + | 369 | WP_038432125.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| M4U10_RS19650 (4125169) | 4125169..4125546 | + | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| M4U10_RS19655 (4125543) | 4125543..4125692 | + | 150 | Protein_3844 | DUF5983 family protein | - |
| M4U10_RS19660 (4125771) | 4125771..4125965 | + | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| M4U10_RS19665 (4126050) | 4126050..4126892 | + | 843 | Protein_3846 | DUF4942 domain-containing protein | - |
| M4U10_RS19670 (4127234) | 4127234..4127404 | + | 171 | Protein_3847 | IS110 family transposase | - |
| M4U10_RS19675 (4128215) | 4128215..4129198 | + | 984 | WP_001361242.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| M4U10_RS19680 (4129270) | 4129270..4130418 | + | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|