MGE detailed information
MGE type: Prophage MGE length: 96657 bp
Accession: NZ_CP103672 Location: 2341535..2438191 Organism: Escherichia coli O25b:H4-ST131 strain 4433 Replicon: chromosome
Accession: NZ_CP103672 Location: 2341535..2438191 Organism: Escherichia coli O25b:H4-ST131 strain 4433 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S92_RS11555 () | 2338583..2339554 | - | 972 | WP_000564759.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| M5S92_RS11560 () | 2339551..2340294 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| M5S92_RS11565 () | 2340335..2340730 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| M5S92_RS11570 () | 2340783..2341553 | - | 771 | WP_042040108.1 | DUF72 domain-containing protein | - |
| M5S92_RS11575 () | 2341535..2342848 | - | 1314 | WP_000362005.1 | Putative defective protein IntQ ; Integrase | Integrase |
| M5S92_RS11580 () | 2342904..2343140 | - | 237 | WP_000528718.1 | excisionase family protein | - |
| M5S92_RS11585 () | 2343149..2343295 | - | 147 | WP_001030156.1 | hypothetical protein | - |
| M5S92_RS11590 () | 2343299..2343541 | - | 243 | WP_000457723.1 | DUF4222 domain-containing protein | - |
| M5S92_RS11595 () | 2343626..2343970 | - | 345 | WP_021519728.1 | hypothetical protein | - |
| M5S92_RS11600 () | 2343967..2344134 | - | 168 | WP_021519727.1 | hypothetical protein | - |
| M5S92_RS11605 () | 2344145..2344408 | - | 264 | WP_000224227.1 | hypothetical protein | - |
| M5S92_RS11610 () | 2344695..2344820 | - | 126 | Protein_2276 | hypothetical protein | - |
| M5S92_RS11615 () | 2344822..2345637 | - | 816 | WP_021519725.1 | ead/Ea22-like family protein | - |
| M5S92_RS11620 () | 2345624..2345938 | - | 315 | WP_021519724.1 | hypothetical protein | - |
| M5S92_RS11625 () | 2345892..2346209 | - | 318 | WP_000179800.1 | DUF4752 family protein | - |
| M5S92_RS11630 () | 2346458..2347039 | - | 582 | WP_001199104.1 | hypothetical protein | - |
| M5S92_RS11635 () | 2347045..2347227 | - | 183 | WP_021519723.1 | hypothetical protein | - |
| M5S92_RS11640 () | 2347422..2347628 | - | 207 | WP_021519722.1 | hypothetical protein | - |
| M5S92_RS11645 () | 2347916..2348419 | - | 504 | WP_000608402.1 | helix-turn-helix domain-containing protein | - |
| M5S92_RS11650 () | 2348523..2349179 | - | 657 | WP_000838344.1 | S24 family peptidase | - |
| M5S92_RS11655 () | 2349291..2349518 | + | 228 | WP_000177358.1 | hypothetical protein | - |
| M5S92_RS11660 () | 2349515..2350222 | + | 708 | WP_001090259.1 | Rha family transcriptional regulator | - |
| M5S92_RS11665 () | 2350331..2350993 | + | 663 | WP_029700954.1 | ash family protein | - |
| M5S92_RS11670 () | 2350990..2351841 | + | 852 | WP_029700955.1 | Rha family phage regulatory protein | - |
| M5S92_RS11675 () | 2351838..2352032 | + | 195 | WP_000626792.1 | hypothetical protein | - |
| M5S92_RS11680 () | 2352029..2352253 | + | 225 | WP_000618007.1 | hypothetical protein | - |
| M5S92_RS11685 () | 2352250..2352549 | + | 300 | WP_000995578.1 | hypothetical protein | - |
| M5S92_RS11690 () | 2352546..2353532 | + | 987 | WP_000092417.1 | hypothetical protein | - |
| M5S92_RS11695 () | 2353543..2354442 | + | 900 | WP_000988266.1 | ATP-binding protein | - |
| M5S92_RS11700 () | 2354439..2355839 | + | 1401 | WP_029700958.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| M5S92_RS11705 () | 2355836..2356093 | + | 258 | WP_001520742.1 | hypothetical protein | - |
| M5S92_RS11710 () | 2356093..2356461 | + | 369 | WP_001205451.1 | antiterminator Q family protein | - |
| M5S92_RS11715 () | 2356525..2357565 | + | 1041 | WP_001025378.1 | DNA cytosine methyltransferase | - |
| M5S92_RS11720 () | 2357534..2358223 | - | 690 | WP_000052342.1 | MAE_28990/MAE_18760 family HEPN-like nuclease | - |
| M5S92_RS11725 () | 2358226..2359383 | - | 1158 | WP_000209290.1 | DUF262 domain-containing protein | - |
| M5S92_RS11730 () | 2359637..2359834 | + | 198 | WP_000917767.1 | hypothetical protein | - |
| M5S92_RS11735 () | 2359985..2360437 | + | 453 | Protein_2301 | DNA methyltransferase | - |
| M5S92_RS11740 () | 2360431..2361867 | + | 1437 | Protein_2302 | sialate O-acetylesterase | - |
| M5S92_RS11745 () | 2362018..2362233 | + | 216 | WP_000284510.1 | class II holin family protein | - |
| M5S92_RS11750 () | 2362238..2362588 | + | 351 | WP_000193280.1 | YdfR family protein | - |
| M5S92_RS11755 () | 2362652..2363185 | + | 534 | WP_016248004.1 | lysozyme | - |
| M5S92_RS11760 () | 2363484..2363951 | + | 468 | WP_001082546.1 | lysis protein | - |
| M5S92_RS11765 () | 2364302..2364442 | + | 141 | WP_000347013.1 | hypothetical protein | - |
| M5S92_RS11770 () | 2364575..2364760 | - | 186 | WP_001329960.1 | YlcI/YnfO family protein | - |
| M5S92_RS11775 () | 2365148..2365696 | + | 549 | WP_001102145.1 | terminase small subunit | - |
| M5S92_RS11780 () | 2365668..2367596 | + | 1929 | WP_001348272.1 | phage terminase large subunit family protein | - |
| M5S92_RS11785 () | 2367580..2367786 | + | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| M5S92_RS11790 () | 2367783..2369375 | + | 1593 | WP_029701046.1 | phage portal protein | - |
| M5S92_RS11795 () | 2369365..2370870 | + | 1506 | WP_001253935.1 | S49 family peptidase | - |
| M5S92_RS11800 () | 2370907..2371254 | + | 348 | WP_000256835.1 | head decoration protein | - |
| M5S92_RS11805 () | 2371312..2372340 | + | 1029 | WP_000522601.1 | major capsid protein | - |
| M5S92_RS11810 () | 2372392..2372775 | + | 384 | WP_000201501.1 | DNA-packaging protein FI | - |
| M5S92_RS11815 () | 2372768..2373121 | + | 354 | WP_001402971.1 | head-tail joining protein | - |
| M5S92_RS11820 () | 2373136..2373711 | + | 576 | WP_029701041.1 | phage tail protein | - |
| M5S92_RS11825 () | 2373708..2374103 | + | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| M5S92_RS11830 () | 2374111..2374863 | + | 753 | WP_000235110.1 | phage tail protein | - |
| M5S92_RS11835 () | 2374877..2375308 | + | 432 | WP_000479095.1 | phage minor tail protein G | - |
| M5S92_RS11840 () | 2375335..2375748 | + | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| M5S92_RS11845 () | 2375729..2378302 | + | 2574 | WP_023909007.1 | phage tail tape measure protein | - |
| M5S92_RS11850 () | 2378299..2378628 | + | 330 | WP_000847298.1 | phage tail protein | - |
| M5S92_RS11855 () | 2378628..2379326 | + | 699 | WP_033561175.1 | phage minor tail protein L | - |
| M5S92_RS11860 () | 2379337..2380080 | + | 744 | WP_000194723.1 | C40 family peptidase | - |
| M5S92_RS11865 () | 2380077..2380658 | + | 582 | WP_021551946.1 | tail assembly protein | - |
| M5S92_RS11870 () | 2381002..2384474 | + | 3473 | Protein_2328 | host specificity protein J | - |
| M5S92_RS11875 () | 2384542..2385141 | + | 600 | WP_001228314.1 | Outer membrane protein X | VF |
| M5S92_RS11880 () | 2385292..2388318 | + | 3027 | WP_106493736.1 | prophage tail fiber N-terminal domain-containing protein | - |
| M5S92_RS11885 () | 2388315..2389217 | + | 903 | WP_000631346.1 | macro domain-containing protein | - |
| M5S92_RS11890 () | 2389226..2389810 | + | 585 | WP_029701058.1 | tail fiber assembly protein | - |
| M5S92_RS11895 () | 2389923..2391293 | - | 1371 | WP_029701056.1 | reverse transcriptase domain-containing protein | - |
| M5S92_RS11900 () | 2391271..2391822 | - | 552 | WP_000545005.1 | SLATT domain-containing protein | - |
| M5S92_RS11905 () | 2392067..2392286 | - | 220 | Protein_2335 | DinI-like family protein | - |
| M5S92_RS11910 () | 2392549..2392644 | - | 96 | Protein_2336 | hypothetical protein | - |
| M5S92_RS11915 () | 2392641..2393207 | - | 567 | WP_000891625.1 | hydrolase | - |
| M5S92_RS11920 () | 2393517..2395289 | + | 1773 | WP_001258676.1 | aspartate--tRNA ligase | - |
| M5S92_RS11925 () | 2395282..2395734 | + | 453 | WP_077249130.1 | dihydroneopterin triphosphate diphosphatase | - |
| M5S92_RS11930 () | 2395763..2396503 | + | 741 | WP_000907234.1 | putative transcriptional regulatory protein YebC | VF |
| M5S92_RS11935 () | 2396538..2397059 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| M5S92_RS11940 () | 2397061..2397663 | - | 603 | WP_001024911.1 | YebB family permuted papain-like enzyme | - |
| M5S92_RS11945 () | 2397734..2397799 | + | 66 | WP_072093883.1 | stress response small protein YobI | - |
| M5S92_RS11950 () | 2397938..2398549 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| M5S92_RS11955 () | 2398558..2399568 | + | 1011 | WP_000568520.1 | Holliday junction branch migration DNA helicase RuvB | - |
| M5S92_RS11960 () | 2399678..2401026 | + | 1349 | WP_099156422.1 | IS3-like element IS1397 family transposase | - |
| M5S92_RS11965 () | 2401220..2402005 | - | 786 | WP_000571478.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| M5S92_RS11970 () | 2402002..2402757 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| M5S92_RS11975 () | 2402836..2403768 | + | 933 | WP_001347089.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| M5S92_RS11980 () | 2403784..2405106 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| M5S92_RS11985 () | 2405225..2406196 | + | 972 | WP_001296141.1 | Lipid A biosynthesis myristoyltransferase | VF |
| M5S92_RS11990 () | 2406328..2407770 | - | 1443 | WP_000091149.1 | pyruvate kinase | - |
| M5S92_RS11995 () | 2407898..2408767 | - | 870 | WP_001056695.1 | DNA-binding transcriptional regulator HexR | - |
| M5S92_RS12000 () | 2409105..2410580 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| M5S92_RS12005 () | 2410815..2412626 | + | 1812 | WP_001069461.1 | phosphogluconate dehydratase | - |
| M5S92_RS12010 () | 2412663..2413304 | + | 642 | WP_000800503.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| M5S92_RS12015 () | 2413360..2414538 | - | 1179 | WP_000173466.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| M5S92_RS12020 () | 2414672..2414962 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| M5S92_RS12025 () | 2415029..2415385 | + | 357 | WP_001295500.1 | protein YebF | - |
| M5S92_RS12030 () | 2415712..2416371 | + | 660 | WP_000024724.1 | tellurite resistance TerB family protein | - |
| M5S92_RS12035 () | 2416580..2418640 | + | 2061 | WP_000936925.1 | oligopeptidase B | - |
| M5S92_RS12040 () | 2418637..2419299 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| M5S92_RS12045 () | 2419323..2419979 | - | 657 | WP_000011664.1 | carbon-nitrogen hydrolase family protein YobB | - |
| M5S92_RS12050 () | 2420081..2420311 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| M5S92_RS12055 () | 2420450..2420824 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| M5S92_RS12060 () | 2420828..2421700 | + | 873 | WP_000879317.1 | copper homeostasis membrane protein CopD | - |
| M5S92_RS12065 () | 2421713..2422054 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 2422084..2422352 | - | 269 | - | - | Antitoxin Detail |
| - | 2422212..2422314 | + | 103 | - | - | Toxin Detail |
| M5S92_RS12070 () | 2422449..2423105 | + | 657 | WP_000812745.1 | protein-serine/threonine phosphatase | - |
| M5S92_RS12075 () | 2423106..2423297 | - | 192 | WP_001296140.1 | YebW family protein | - |
| M5S92_RS12080 () | 2423402..2423638 | - | 237 | WP_001295499.1 | YebV family protein | - |
| M5S92_RS12085 () | 2423755..2425194 | - | 1440 | WP_001296139.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| M5S92_RS12090 () | 2425274..2427907 | - | 2634 | WP_001298452.1 | Intermembrane transport protein YebT | VF |
| M5S92_RS12095 () | 2427876..2429159 | - | 1284 | WP_001531756.1 | membrane integrity lipid transport subunit YebS | - |
| M5S92_RS12100 () | 2429289..2429786 | + | 498 | WP_001029106.1 | L-methionine (R)-S-oxide reductase | - |
| M5S92_RS12105 () | 2429883..2430581 | + | 699 | WP_000431388.1 | RNA chaperone ProQ | - |
| M5S92_RS12110 () | 2430601..2432649 | + | 2049 | WP_001055794.1 | carboxy terminal-processing peptidase | - |
| M5S92_RS12115 () | 2432841..2433722 | + | 882 | WP_000984517.1 | protease HtpX | - |
| M5S92_RS12120 () | 2433768..2435141 | - | 1374 | WP_001296135.1 | MFS transporter | - |
| M5S92_RS12125 () | 2435318..2436109 | + | 792 | WP_001262185.1 | DNA-binding transcriptional regulator KdgR | - |
| M5S92_RS12130 () | 2436253..2436492 | - | 240 | WP_001211011.1 | YobH family protein | - |
| M5S92_RS12135 () | 2436651..2436794 | + | 144 | WP_000714544.1 | PhoP/PhoQ regulator MgrB | - |
| M5S92_RS12140 () | 2436869..2437156 | + | 288 | WP_001006866.1 | YebO family protein | - |
| M5S92_RS12145 () | 2437826..2437969 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| M5S92_RS12150 () | 2437982..2438191 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| M5S92_RS12155 () | 2438357..2439166 | + | 810 | WP_000010096.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| M5S92_RS12160 () | 2439163..2439729 | - | 567 | Protein_2386 | manganese efflux pump MntP | - |
| M5S92_RS12165 () | 2440158..2440616 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| M5S92_RS12170 () | 2440671..2441522 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| M5S92_RS12175 () | 2441535..2442335 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|