MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 73453 bp
Accession: NZ_CP103657 Location: 868806..942258 Organism: Escherichia coli strain 3150 Replicon: chromosome
Accession: NZ_CP103657 Location: 868806..942258 Organism: Escherichia coli strain 3150 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5R25_RS04070 (865406) | 865406..866554 | - | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| M5R25_RS04075 (866626) | 866626..867609 | - | 984 | WP_024946586.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| M5R25_RS04080 (868420) | 868420..868590 | - | 171 | Protein_802 | IS110 family transposase | - |
| M5R25_RS04085 (868933) | 868933..869502 | - | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| M5R25_RS04090 (869599) | 869599..869796 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| M5R25_RS04095 (869808) | 869808..870296 | - | 489 | WP_000777545.1 | DUF5983 family protein | - |
| M5R25_RS04100 (870293) | 870293..870667 | - | 375 | WP_032333762.1 | TA system toxin CbtA family protein | Toxin Detail |
| M5R25_RS04105 (870757) | 870757..871125 | - | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| M5R25_RS04110 (871288) | 871288..871509 | - | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| M5R25_RS04115 (871572) | 871572..872048 | - | 477 | WP_001186786.1 | RadC family protein | - |
| M5R25_RS04120 (872064) | 872064..872549 | - | 486 | WP_000214398.1 | antirestriction protein | - |
| M5R25_RS04125 (872640) | 872640..873458 | - | 819 | WP_001773857.1 | DUF932 domain-containing protein | - |
| M5R25_RS04130 (873548) | 873548..873781 | - | 234 | WP_001278283.1 | DUF905 family protein | - |
| M5R25_RS04135 (873787) | 873787..874464 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| M5R25_RS04140 (874612) | 874612..875292 | - | 681 | WP_032333197.1 | WYL domain-containing protein | - |
| M5R25_RS04145 (875495) | 875495..876379 | - | 885 | WP_001564055.1 | YfjP family GTPase | - |
| M5R25_RS04150 (876480) | 876480..877703 | + | 1224 | WP_098756072.1 | hypothetical protein | - |
| M5R25_RS04155 (878866) | 878866..879396 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| M5R25_RS04160 (880066) | 880066..880797 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| M5R25_RS04165 (881318) | 881318..881770 | + | 453 | WP_000558152.1 | acyltransferase | - |
| M5R25_RS04170 (882306) | 882306..883241 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| M5R25_RS04175 (883234) | 883234..884169 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| M5R25_RS04180 (884253) | 884253..885503 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| M5R25_RS04185 (885522) | 885522..886616 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| M5R25_RS04190 (887917) | 887917..888483 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| M5R25_RS04195 (888741) | 888741..889316 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| M5R25_RS04200 (889385) | 889385..889618 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| M5R25_RS04205 (889615) | 889615..889740 | + | 126 | WP_001342704.1 | hypothetical protein | - |
| M5R25_RS04210 (889869) | 889869..889931 | + | 63 | Protein_828 | IS3 family transposase IS2 | Transposase |
| M5R25_RS04215 (889917) | 889917..890183 | - | 267 | Protein_829 | IS3 family transposase IS2 | Transposase |
| M5R25_RS04220 (890274) | 890274..891431 | + | 1158 | Protein_830 | Multidrug resistance protein MexB | VF |
| M5R25_RS04225 (891531) | 891531..892202 | + | 672 | WP_223350500.1 | TetR/AcrR family transcriptional regulator | - |
| M5R25_RS04230 (892333) | 892333..892518 | + | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| M5R25_RS04235 (892875) | 892875..893420 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| M5R25_RS04240 (893465) | 893465..894616 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| M5R25_RS04245 (894745) | 894745..895800 | - | 1056 | WP_001564046.1 | HTH-type transcriptional activator RhaR | VF |
| M5R25_RS04250 (895817) | 895817..897079 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| M5R25_RS04255 (897695) | 897695..898216 | - | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| M5R25_RS04260 (898244) | 898244..898783 | - | 540 | WP_001564045.1 | hypothetical protein | - |
| M5R25_RS04265 (899269) | 899269..900174 | - | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| M5R25_RS04270 (900311) | 900311..901228 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| M5R25_RS04275 (901337) | 901337..903889 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| M5R25_RS04280 (903938) | 903938..904513 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| M5R25_RS04285 (904524) | 904524..904823 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| M5R25_RS04290 (904847) | 904847..906364 | - | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| M5R25_RS04295 (906425) | 906425..907210 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| M5R25_RS04300 (907232) | 907232..907513 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| M5R25_RS04305 (907798) | 907798..908994 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| M5R25_RS04310 (909023) | 909023..909520 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| M5R25_RS04315 (909548) | 909548..909817 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| M5R25_RS04320 (909829) | 909829..910554 | - | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| M5R25_RS04325 (910538) | 910538..911296 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| M5R25_RS04330 (911351) | 911351..912037 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| M5R25_RS04335 (912177) | 912177..913295 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| M5R25_RS04340 (913652) | 913652..914152 | + | 501 | Protein_854 | DNA-binding protein | - |
| M5R25_RS04345 (914248) | 914248..914481 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| M5R25_RS04350 (914534) | 914534..914725 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| M5R25_RS04355 (915446) | 915446..915706 | + | 261 | Protein_857 | IS3 family transposase ISLad1 | Transposase |
| M5R25_RS04360 (915849) | 915849..917594 | + | 1746 | WP_001564039.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| M5R25_RS04365 (917750) | 917750..917936 | + | 187 | Protein_859 | hypothetical protein | - |
| M5R25_RS04370 (917988) | 917988..919335 | + | 1348 | Protein_860 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| M5R25_RS04375 (919452) | 919452..920096 | + | 645 | WP_024196335.1 | hypothetical protein | - |
| M5R25_RS04380 (920237) | 920237..921469 | + | 1233 | WP_001564037.1 | phosphoadenosine phosphosulfate reductase | - |
| M5R25_RS04385 (921454) | 921454..922092 | + | 639 | WP_001564035.1 | ParB N-terminal domain-containing protein | - |
| M5R25_RS04390 (922171) | 922171..922440 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| M5R25_RS04395 (922461) | 922461..923105 | + | 645 | WP_001564034.1 | hypothetical protein | - |
| M5R25_RS04400 (923170) | 923170..923493 | + | 324 | WP_001564033.1 | hypothetical protein | - |
| M5R25_RS04405 (923541) | 923541..924332 | - | 792 | Protein_867 | ATP-dependent helicase | - |
| M5R25_RS04410 (924333) | 924333..924716 | + | 384 | Protein_868 | IS3 family transposase | - |
| M5R25_RS04415 (925389) | 925389..926897 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| M5R25_RS04420 (926981) | 926981..927460 | + | 480 | Protein_870 | IS3 family transposase IS629 | Transposase |
| M5R25_RS04425 (927472) | 927472..927645 | + | 174 | Protein_871 | hypothetical protein | - |
| M5R25_RS04430 (927658) | 927658..927915 | - | 258 | Protein_872 | IS3 family transposase IS911 | Transposase |
| M5R25_RS04435 (927988) | 927988..928332 | - | 345 | Protein_873 | alcohol dehydrogenase catalytic domain-containing protein | - |
| M5R25_RS04440 (928951) | 928951..929644 | - | 694 | Protein_874 | IS1 family transposase | - |
| M5R25_RS04445 (929897) | 929897..931366 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| M5R25_RS04450 (931471) | 931471..933840 | + | 2370 | WP_000671170.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| M5R25_RS04455 (933915) | 933915..935414 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| M5R25_RS04460 (935557) | 935557..936254 | + | 698 | WP_224053098.1 | IS1 family transposase IS1S | Transposase |
| M5R25_RS04465 (936721) | 936721..937272 | - | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| M5R25_RS04470 (937439) | 937439..938230 | - | 792 | Protein_880 | IS3 family transposase | - |
| M5R25_RS04480 (939474) | 939474..940517 | - | 1044 | WP_000147018.1 | hypothetical protein | - |
| M5R25_RS04485 (940773) | 940773..942038 | - | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| M5R25_RS04495 (942417) | 942417..943124 | - | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| M5R25_RS04500 (943277) | 943277..943354 | + | 78 | WP_212734103.1 | hypothetical protein | - |
| M5R25_RS04505 (943516) | 943516..945651 | + | 2136 | WP_001564026.1 | ornithine decarboxylase | - |
| M5R25_RS04510 (945700) | 945700..946956 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|