MGE detailed information
MGE type: Conjugative plasmid MGE length: 86843 bp
Accession: NZ_CP103628 Location: 1..86843 Organism: Escherichia coli strain 4012 Replicon: plasmid pMB6206_2
Accession: NZ_CP103628 Location: 1..86843 Organism: Escherichia coli strain 4012 Replicon: plasmid pMB6206_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S78_RS24325 (1) | 1..510 | + | 510 | WP_000045394.1 | hypothetical protein | - |
| M5S78_RS24330 (1579) | 1579..2610 | - | 1032 | WP_000907861.1 | plasmid replication initiator RepA | - |
| M5S78_RS24335 (3568) | 3568..3846 | + | 279 | WP_219065241.1 | ash family protein | - |
| M5S78_RS24340 (3764) | 3764..4051 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| M5S78_RS24345 (4493) | 4493..5026 | + | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
| M5S78_RS24350 (5279) | 5279..5962 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| M5S78_RS24355 (6135) | 6135..6686 | + | 552 | WP_000744646.1 | hypothetical protein | - |
| M5S78_RS24360 (6848) | 6848..7102 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| M5S78_RS24365 (7269) | 7269..7565 | + | 297 | WP_000494780.1 | hypothetical protein | - |
| M5S78_RS24370 (8484) | 8484..9551 | + | 1068 | WP_001360287.1 | hypothetical protein | VF |
| M5S78_RS24375 (9551) | 9551..9988 | + | 438 | WP_000539806.1 | hypothetical protein | VF |
| M5S78_RS24380 (10002) | 10002..11684 | + | 1683 | WP_000748143.1 | Aerotaxis receptor | VF |
| M5S78_RS24385 (11677) | 11677..12972 | + | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| M5S78_RS24390 (12959) | 12959..13411 | + | 453 | WP_001247337.1 | hypothetical protein | VF |
| M5S78_RS24395 (13422) | 13422..14975 | + | 1554 | WP_000362206.1 | hypothetical protein | VF |
| M5S78_RS24400 (14988) | 14988..16073 | + | 1086 | WP_259430852.1 | hypothetical protein | VF |
| M5S78_RS24405 (16090) | 16090..16704 | + | 615 | WP_000908226.1 | hypothetical protein | VF |
| M5S78_RS24410 (16714) | 16714..17274 | + | 561 | WP_259430853.1 | Transposon Tn3 resolvase | VF |
| M5S78_RS24415 (17259) | 17259..17915 | + | 657 | WP_001193549.1 | hypothetical protein | VF |
| M5S78_RS24420 (17915) | 17915..19207 | + | 1293 | WP_001619585.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | VF |
| M5S78_RS24425 (19204) | 19204..19452 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| M5S78_RS24430 (20973) | 20973..22127 | + | 1155 | WP_001139958.1 | site-specific integrase | - |
| M5S78_RS24435 (22278) | 22278..23102 | + | 825 | WP_001238938.1 | conjugal transfer protein TraE | - |
| M5S78_RS24440 (23187) | 23187..24389 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| M5S78_RS24445 (24449) | 24449..25033 | + | 585 | WP_000977523.1 | histidine phosphatase family protein | - |
| M5S78_RS24450 (25428) | 25428..25886 | + | 459 | WP_001079808.1 | Protein StbB | VF |
| M5S78_RS24455 (25883) | 25883..26701 | + | 819 | WP_001455305.1 | hypothetical protein | VF |
| M5S78_RS24460 (26698) | 26698..27846 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| M5S78_RS24465 (27843) | 27843..28133 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| M5S78_RS24470 (28148) | 28148..28699 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| M5S78_RS24475 (28789) | 28789..32556 | + | 3768 | WP_116974655.1 | DUF5710 domain-containing protein | - |
| M5S78_RS24480 (32574) | 32574..32921 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| M5S78_RS24485 (32918) | 32918..33610 | + | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| M5S78_RS24490 (33621) | 33621..34604 | + | 984 | WP_001191877.1 | hypothetical protein | VF |
| M5S78_RS24495 (34607) | 34607..35896 | + | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| M5S78_RS24500 (35896) | 35896..36600 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| M5S78_RS24505 (36600) | 36600..37127 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| M5S78_RS24510 (37178) | 37178..37582 | + | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| M5S78_RS24515 (37646) | 37646..37834 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| M5S78_RS24520 (37818) | 37818..38618 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| M5S78_RS24525 (38708) | 38708..41752 | + | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| M5S78_RS24530 (41752) | 41752..42366 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| M5S78_RS24535 (42333) | 42333..43535 | + | 1203 | WP_001385654.1 | IncI1-type conjugal transfer protein TraW | - |
| M5S78_RS24540 (43564) | 43564..44148 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| M5S78_RS24545 (44245) | 44245..46413 | + | 2169 | WP_033561886.1 | DotA/TraY family protein | - |
| M5S78_RS24550 (46487) | 46487..47137 | + | 651 | WP_032179289.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| M5S78_RS24555 (47209) | 47209..47418 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| M5S78_RS24560 (47810) | 47810..47986 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| M5S78_RS24565 (48051) | 48051..48283 | - | 233 | Protein_48 | hypothetical protein | - |
| M5S78_RS24570 (48645) | 48645..48896 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| M5S78_RS24575 (48968) | 48968..49120 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - (49175) | 49175..49232 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (49175) | 49175..49232 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (49175) | 49175..49232 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (49175) | 49175..49232 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| M5S78_RS24580 (49412) | 49412..50620 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| M5S78_RS24585 (50639) | 50639..51709 | + | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| M5S78_RS24590 (51702) | 51702..53993 | + | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| M5S78_RS24595 (54030) | 54030..56729 | - | 2700 | WP_259430851.1 | Protein TraI | Relaxase |
| M5S78_RS24600 (56740) | 56740..57072 | - | 333 | WP_033561884.1 | IncI1-type relaxosome accessory protein NikA | - |
| M5S78_RS24605 (57306) | 57306..57641 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| M5S78_RS24610 (57726) | 57726..58574 | - | 849 | WP_033561883.1 | DUF4942 domain-containing protein | - |
| M5S78_RS24615 (59155) | 59155..59406 | + | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| M5S78_RS24620 (59437) | 59437..59634 | - | 198 | WP_001348086.1 | hypothetical protein | - |
| M5S78_RS24625 (59657) | 59657..60571 | - | 915 | WP_000038401.1 | Recombination-promoting nuclease RpnA | VF |
| M5S78_RS24630 (60636) | 60636..60902 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| M5S78_RS24635 (60996) | 60996..61430 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| M5S78_RS24640 (62159) | 62159..62659 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| M5S78_RS24645 (63121) | 63121..63717 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| M5S78_RS24650 (63714) | 63714..64433 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| M5S78_RS24655 (64430) | 64430..64864 | - | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| M5S78_RS24660 (64919) | 64919..66877 | - | 1959 | WP_079932375.1 | ParB/RepB/Spo0J family partition protein | - |
| M5S78_RS24665 (66936) | 66936..67169 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| M5S78_RS24670 (67227) | 67227..67754 | - | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| M5S78_RS24675 (68138) | 68138..68452 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| M5S78_RS24680 (68523) | 68523..68714 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| M5S78_RS24685 (68711) | 68711..69133 | - | 423 | WP_001629087.1 | DUF1380 family protein | - |
| M5S78_RS24690 (69180) | 69180..69605 | - | 426 | WP_001198902.1 | antirestriction protein | - |
| M5S78_RS24695 (70016) | 70016..70786 | - | 771 | WP_033561909.1 | hypothetical protein | - |
| M5S78_RS24700 (70831) | 70831..71298 | - | 468 | WP_225384886.1 | DUF1380 family protein | - |
| M5S78_RS24705 (71279) | 71279..71500 | - | 222 | WP_021511693.1 | hypothetical protein | - |
| M5S78_RS24710 (71501) | 71501..72184 | - | 684 | WP_021511694.1 | DNA methylase | - |
| M5S78_RS24715 (72260) | 72260..72571 | - | 312 | WP_001732000.1 | hypothetical protein | - |
| M5S78_RS24720 (72568) | 72568..73470 | - | 903 | WP_176179399.1 | DUF1281 domain-containing protein | - |
| M5S78_RS24725 (73888) | 73888..74136 | + | 249 | WP_000618111.1 | DinI-like family protein | - |
| M5S78_RS24730 (74133) | 74133..74570 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| M5S78_RS24735 (74570) | 74570..75844 | + | 1275 | WP_033561923.1 | Y-family DNA polymerase | - |
| M5S78_RS24740 (75846) | 75846..76262 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| M5S78_RS24745 (76255) | 76255..77235 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| M5S78_RS24750 (77649) | 77649..77957 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| M5S78_RS24755 (78044) | 78044..78688 | - | 645 | WP_001144036.1 | ParA family protein | - |
| M5S78_RS24760 (78868) | 78868..79647 | - | 780 | WP_006704469.1 | site-specific integrase | - |
| M5S78_RS24765 (79649) | 79649..80062 | - | 414 | WP_001690258.1 | hypothetical protein | - |
| M5S78_RS24770 (80630) | 80630..80884 | + | 255 | WP_000343103.1 | hypothetical protein | - |
| M5S78_RS24775 (80884) | 80884..81474 | + | 591 | WP_000194572.1 | hypothetical protein | - |
| M5S78_RS24780 (81494) | 81494..81841 | - | 348 | WP_001582578.1 | DUF6404 family protein | - |
| M5S78_RS24785 (81970) | 81970..82305 | + | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| M5S78_RS24790 (82327) | 82327..84207 | - | 1881 | WP_001283344.1 | colicin Ia central receptor-binding domain-containing protein | - |
| M5S78_RS24795 (84486) | 84486..85832 | - | 1347 | WP_001132033.1 | protein YagA | - |
| M5S78_RS24800 (86186) | 86186..86788 | + | 603 | WP_000517692.1 | ProQ/FINO family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|