MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP103626 Location: 4145002..4164254 Organism: Escherichia coli strain 4012 Replicon: chromosome
Accession: NZ_CP103626 Location: 4145002..4164254 Organism: Escherichia coli strain 4012 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S78_RS20050 (4140481) | 4140481..4140984 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| M5S78_RS20055 (4140997) | 4140997..4141527 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| M5S78_RS20060 (4141537) | 4141537..4144173 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| M5S78_RS20065 (4144240) | 4144240..4144965 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| M5S78_RS20070 (4145002) | 4145002..4145541 | - | 540 | WP_130081135.1 | putative major fimbrial subunit LpfA | VF |
| M5S78_RS20075 (4145606) | 4145606..4146154 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| M5S78_RS20080 (4146636) | 4146636..4147232 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| M5S78_RS20085 (4147710) | 4147710..4148312 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| M5S78_RS20090 (4149768) | 4149768..4150484 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| M5S78_RS20095 (4150504) | 4150504..4151610 | + | 1107 | WP_023568191.1 | N-acetylneuraminate epimerase | - |
| M5S78_RS20100 (4151675) | 4151675..4152655 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| M5S78_RS20105 (4152765) | 4152765..4152970 | + | 206 | Protein_3927 | HNH endonuclease | - |
| M5S78_RS20110 (4153238) | 4153238..4154478 | - | 1241 | Protein_3928 | helicase YjhR | - |
| M5S78_RS20115 (4154594) | 4154594..4154725 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| M5S78_RS20120 (4155216) | 4155216..4155473 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| M5S78_RS20125 (4155485) | 4155485..4156030 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| M5S78_RS20130 (4156086) | 4156086..4156832 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| M5S78_RS20135 (4157001) | 4157001..4157219 | + | 219 | Protein_3933 | hypothetical protein | - |
| M5S78_RS20140 (4157257) | 4157257..4157373 | + | 117 | Protein_3934 | VOC family protein | - |
| M5S78_RS20145 (4157618) | 4157618..4158739 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| M5S78_RS20150 (4158736) | 4158736..4159014 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| M5S78_RS20155 (4159026) | 4159026..4160339 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| M5S78_RS20160 (4160352) | 4160352..4161158 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| M5S78_RS20165 (4161289) | 4161289..4161720 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| M5S78_RS20170 (4161732) | 4161732..4162364 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| M5S78_RS20175 (4162381) | 4162381..4163163 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| M5S78_RS20180 (4163466) | 4163466..4164254 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| M5S78_RS20185 (4164259) | 4164259..4165164 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| M5S78_RS20190 (4165175) | 4165175..4167142 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| M5S78_RS20195 (4167249) | 4167249..4168598 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|