MGE detailed information
MGE type: Conjugative plasmid MGE length: 86833 bp
Accession: NZ_CP103624 Location: 1..86833 Organism: Escherichia coli strain 3985 Replicon: plasmid pMB6420_1
Accession: NZ_CP103624 Location: 1..86833 Organism: Escherichia coli strain 3985 Replicon: plasmid pMB6420_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T36_RS23280 (M5T36_23280) | 222..926 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M5T36_RS23285 (M5T36_23285) | 1196..1621 | + | 426 | WP_001198882.1 | antirestriction protein | - |
| M5T36_RS23290 (M5T36_23290) | 1668..2090 | + | 423 | WP_000271757.1 | DUF1380 family protein | - |
| M5T36_RS23295 (M5T36_23295) | 2087..2278 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| M5T36_RS23300 (M5T36_23300) | 2349..2663 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| M5T36_RS23305 (M5T36_23305) | 3047..3574 | + | 528 | WP_001276104.1 | single-stranded DNA-binding protein | - |
| M5T36_RS23310 (M5T36_23310) | 3632..3865 | + | 234 | WP_000006025.1 | DUF905 domain-containing protein | - |
| M5T36_RS23315 (M5T36_23315) | 3924..5882 | + | 1959 | WP_001145474.1 | ParB/RepB/Spo0J family partition protein | - |
| M5T36_RS23320 (M5T36_23320) | 5937..6371 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| M5T36_RS23325 (M5T36_23325) | 6368..7087 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| M5T36_RS23330 (M5T36_23330) | 7084..7680 | + | 597 | WP_000977998.1 | hypothetical protein | - |
| M5T36_RS23335 (M5T36_23335) | 8142..8642 | + | 501 | WP_000117632.1 | antirestriction protein ArdA | - |
| M5T36_RS23340 (M5T36_23340) | 9375..9809 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| M5T36_RS23345 (M5T36_23345) | 9902..10168 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| M5T36_RS23350 (M5T36_23350) | 10346..10735 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| M5T36_RS23355 (M5T36_23355) | 10732..11622 | + | 891 | WP_000038343.1 | Recombination-promoting nuclease RpnA | VF |
| M5T36_RS23360 (M5T36_23360) | 11622..11867 | + | 246 | WP_001260882.1 | hypothetical protein | - |
| M5T36_RS23365 (M5T36_23365) | 11898..12149 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| M5T36_RS23370 (M5T36_23370) | 12730..13578 | + | 849 | WP_032255248.1 | DUF4942 domain-containing protein | - |
| M5T36_RS23375 (M5T36_23375) | 13664..13999 | - | 336 | WP_000157090.1 | hypothetical protein | - |
| M5T36_RS23380 (M5T36_23380) | 14232..14564 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| M5T36_RS23385 (M5T36_23385) | 14576..17287 | + | 2712 | WP_000991385.1 | Protein TraI | Relaxase |
| M5T36_RS23390 (M5T36_23390) | 17355..17786 | + | 432 | WP_001335086.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| M5T36_RS23395 (M5T36_23395) | 17884..18125 | - | 242 | Protein_24 | TonB-dependent receptor | - |
| M5T36_RS23400 (M5T36_23400) | 18581..20884 | - | 2304 | WP_000077663.1 | F-type conjugative transfer protein TrbC | - |
| M5T36_RS23405 (M5T36_23405) | 20865..21989 | - | 1125 | WP_000152386.1 | DsbC family protein | - |
| M5T36_RS23410 (M5T36_23410) | 21986..23302 | - | 1317 | WP_032190748.1 | IncI1-type conjugal transfer protein TrbA | - |
| M5T36_RS23415 (M5T36_23415) | 24387..24638 | + | 252 | WP_001081065.1 | DinQ-like type I toxin DqlB | - |
| M5T36_RS23420 (M5T36_23420) | 24701..24877 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| M5T36_RS23425 (M5T36_23425) | 25027..25494 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| M5T36_RS23430 (M5T36_23430) | 25653..26276 | + | 624 | WP_001155252.1 | helix-turn-helix domain-containing protein | - |
| M5T36_RS23435 (M5T36_23435) | 26474..26689 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| M5T36_RS23440 (M5T36_23440) | 26693..27061 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| M5T36_RS23445 (M5T36_23445) | 27520..29121 | - | 1602 | WP_001401774.1 | IS66 family transposase ISSfl3 | Transposase |
| M5T36_RS23450 (M5T36_23450) | 29141..29488 | - | 348 | WP_000631709.1 | IS66 family transposase ISSfl3 | Transposase |
| M5T36_RS23455 (M5T36_23455) | 29485..30162 | - | 678 | WP_259429170.1 | IS66 family transposase ISSfl3 | Transposase |
| M5T36_RS23460 (M5T36_23460) | 30216..30359 | - | 144 | WP_259429171.1 | hypothetical protein | - |
| M5T36_RS23465 (M5T36_23465) | 30689..30841 | + | 153 | WP_001335079.1 | Hok/Gef family protein | - |
| M5T36_RS23470 (M5T36_23470) | 30979..32565 | - | 1587 | WP_000004564.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| M5T36_RS23475 (M5T36_23475) | 32839..33486 | - | 648 | WP_015056434.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| M5T36_RS23480 (M5T36_23480) | 33574..35733 | - | 2160 | WP_000691811.1 | DotA/TraY family protein | - |
| M5T36_RS23485 (M5T36_23485) | 35808..36377 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| M5T36_RS23490 (M5T36_23490) | 36374..37579 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| M5T36_RS23495 (M5T36_23495) | 37537..38157 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| M5T36_RS23500 (M5T36_23500) | 38157..41201 | - | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| M5T36_RS23505 (M5T36_23505) | 41426..41971 | + | 546 | WP_001390888.1 | hypothetical protein | - |
| M5T36_RS23510 (M5T36_23510) | 41944..42327 | - | 384 | WP_224670268.1 | hypothetical protein | - |
| M5T36_RS23515 (M5T36_23515) | 42324..42683 | - | 360 | WP_000380400.1 | hypothetical protein | - |
| M5T36_RS23520 (M5T36_23520) | 42738..43556 | - | 819 | WP_072108035.1 | conjugal transfer protein TraT | - |
| M5T36_RS23525 (M5T36_23525) | 43570..43722 | - | 153 | Protein_50 | TraS | - |
| M5T36_RS23530 (M5T36_23530) | 43779..44177 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| M5T36_RS23535 (M5T36_23535) | 44224..44754 | - | 531 | WP_000987023.1 | conjugal transfer protein TraQ | - |
| M5T36_RS23540 (M5T36_23540) | 44751..45464 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| M5T36_RS23545 (M5T36_23545) | 45461..46792 | - | 1332 | WP_001288254.1 | conjugal transfer protein TraO | - |
| M5T36_RS23550 (M5T36_23550) | 46796..47770 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| M5T36_RS23555 (M5T36_23555) | 47781..48476 | - | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| M5T36_RS23560 (M5T36_23560) | 48488..48838 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| M5T36_RS23565 (M5T36_23565) | 48855..52916 | - | 4062 | WP_000842447.1 | DUF5710 domain-containing protein | - |
| M5T36_RS23570 (M5T36_23570) | 52980..53270 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| M5T36_RS23575 (M5T36_23575) | 53267..54415 | - | 1149 | WP_000775210.1 | putative protein YggR | VF |
| M5T36_RS23580 (M5T36_23580) | 54399..55235 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| M5T36_RS23585 (M5T36_23585) | 55232..55690 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| M5T36_RS23590 (M5T36_23590) | 55794..56996 | - | 1203 | WP_087616410.1 | conjugal transfer protein TraF | - |
| M5T36_RS23595 (M5T36_23595) | 57098..57919 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| M5T36_RS23600 (M5T36_23600) | 58084..58278 | - | 195 | Protein_65 | integrase | - |
| M5T36_RS23605 (M5T36_23605) | 58392..59753 | - | 1362 | WP_025715295.1 | hypothetical protein | VF |
| M5T36_RS23610 (M5T36_23610) | 59771..60397 | - | 627 | WP_000939245.1 | prepilin peptidase | - |
| M5T36_RS23615 (M5T36_23615) | 60413..60898 | - | 486 | WP_001080768.1 | hypothetical protein | VF |
| M5T36_RS23620 (M5T36_23620) | 60943..61479 | - | 537 | WP_000111534.1 | hypothetical protein | VF |
| M5T36_RS23625 (M5T36_23625) | 61541..62635 | - | 1095 | WP_000697158.1 | type II secretion system F family protein | - |
| M5T36_RS23630 (M5T36_23630) | 62637..64145 | - | 1509 | WP_000880807.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| M5T36_RS23635 (M5T36_23635) | 64249..64707 | - | 459 | WP_000095885.1 | hypothetical protein | VF |
| M5T36_RS23640 (M5T36_23640) | 64697..65992 | - | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| M5T36_RS23645 (M5T36_23645) | 66013..67632 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| M5T36_RS23650 (M5T36_23650) | 67664..68101 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| M5T36_RS23655 (M5T36_23655) | 68105..69175 | - | 1071 | WP_000730428.1 | hypothetical protein | VF |
| M5T36_RS23660 (M5T36_23660) | 69402..69737 | - | 336 | WP_001335624.1 | hypothetical protein | - |
| M5T36_RS23665 (M5T36_23665) | 69853..70095 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| M5T36_RS23670 (M5T36_23670) | 70176..71870 | - | 1695 | WP_000482665.1 | flotillin family protein | - |
| M5T36_RS23675 (M5T36_23675) | 71897..72517 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| M5T36_RS23680 (M5T36_23680) | 72784..73446 | - | 663 | WP_000154142.1 | hypothetical protein | - |
| M5T36_RS23685 (M5T36_23685) | 73587..74093 | - | 507 | WP_001335626.1 | transcription termination/antitermination NusG family protein | - |
| M5T36_RS23690 (M5T36_23690) | 74931..75809 | + | 879 | WP_000729439.1 | incFII family plasmid replication initiator RepA | - |
| M5T36_RS23695 (M5T36_23695) | 76708..76992 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| M5T36_RS23700 (M5T36_23700) | 76992..77267 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M5T36_RS23705 (M5T36_23705) | 77373..77576 | + | 204 | Protein_86 | hypothetical protein | - |
| M5T36_RS23710 (M5T36_23710) | 77845..78111 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| M5T36_RS23715 (M5T36_23715) | 78249..78851 | - | 603 | WP_000517694.1 | ProQ/FINO family protein | - |
| M5T36_RS23720 (M5T36_23720) | 79205..80551 | + | 1347 | WP_001132037.1 | protein YagA | - |
| M5T36_RS23725 (M5T36_23725) | 81062..81364 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| M5T36_RS23730 (M5T36_23730) | 81361..81987 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| M5T36_RS23735 (M5T36_23735) | 82183..82719 | - | 537 | Protein_92 | DUF4113 domain-containing protein | - |
| M5T36_RS23740 (M5T36_23740) | 82773..83477 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M5T36_RS23745 (M5T36_23745) | 83599..84504 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| M5T36_RS23750 (M5T36_23750) | 84501..85739 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| M5T36_RS23755 (M5T36_23755) | 85739..86323 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|