MGE detailed information
MGE type: Genomic_island MGE length: 75956 bp
Accession: NZ_CP103623 Location: 4056661..4132616 Organism: Escherichia coli strain 3985 Replicon: chromosome
Accession: NZ_CP103623 Location: 4056661..4132616 Organism: Escherichia coli strain 3985 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T36_RS19515 (4051980) | 4051980..4052882 | - | 903 | WP_000832227.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| M5T36_RS19520 (4052902) | 4052902..4053405 | - | 504 | WP_000872004.1 | type 1 fimbria minor subunit FimG | - |
| M5T36_RS19525 (4053418) | 4053418..4053948 | - | 531 | WP_001244823.1 | type 1 fimbria minor subunit FimF | - |
| M5T36_RS19530 (4053958) | 4053958..4056594 | - | 2637 | WP_000120944.1 | fimbrial usher FimD | - |
| M5T36_RS19535 (4056661) | 4056661..4057386 | - | 726 | WP_000066573.1 | Chaperone protein FimC | VF |
| M5T36_RS19540 (4057423) | 4057423..4057962 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| M5T36_RS19545 (4058027) | 4058027..4058575 | - | 549 | WP_000695543.1 | Fimbrial subunit type 1 | VF |
| M5T36_RS19550 (4059055) | 4059055..4059651 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| M5T36_RS19555 (4060129) | 4060129..4060731 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| M5T36_RS19560 (4062187) | 4062187..4062903 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| M5T36_RS19565 (4062923) | 4062923..4064029 | + | 1107 | WP_001331344.1 | N-acetylneuraminate epimerase | - |
| M5T36_RS19570 (4064094) | 4064094..4065074 | + | 981 | WP_000991444.1 | sialate O-acetylesterase | - |
| M5T36_RS19575 (4065082) | 4065082..4065186 | - | 105 | Protein_3828 | HNH endonuclease | - |
| M5T36_RS19580 (4065286) | 4065286..4066158 | + | 873 | WP_000168592.1 | HNH endonuclease | - |
| M5T36_RS19585 (4066328) | 4066328..4068403 | + | 2076 | WP_000177023.1 | AAA family ATPase | - |
| M5T36_RS19590 (4068396) | 4068396..4069739 | + | 1344 | WP_000504877.1 | McrC family protein | - |
| M5T36_RS19595 (4069736) | 4069736..4070122 | + | 387 | WP_000148644.1 | hypothetical protein | - |
| M5T36_RS19600 (4070173) | 4070173..4072320 | + | 2148 | WP_001040176.1 | N-6 DNA methylase | - |
| M5T36_RS19605 (4072320) | 4072320..4073774 | + | 1455 | WP_000109895.1 | restriction endonuclease subunit S | - |
| M5T36_RS19610 (4073810) | 4073810..4075096 | + | 1287 | WP_000377419.1 | hypothetical protein | - |
| M5T36_RS19615 (4075093) | 4075093..4079379 | + | 4287 | WP_000007257.1 | hypothetical protein | - |
| M5T36_RS19620 (4079390) | 4079390..4080238 | + | 849 | WP_000092642.1 | hypothetical protein | - |
| M5T36_RS19625 (4080241) | 4080241..4081398 | + | 1158 | WP_001004904.1 | hypothetical protein | - |
| M5T36_RS19630 (4081388) | 4081388..4083073 | + | 1686 | WP_000323666.1 | ATP-binding protein | - |
| M5T36_RS19635 (4083081) | 4083081..4083623 | + | 543 | WP_001115385.1 | hypothetical protein | - |
| M5T36_RS19640 (4083620) | 4083620..4085089 | + | 1470 | WP_001022619.1 | Serine/threonine-protein kinase PknD | VF |
| M5T36_RS19645 (4085290) | 4085290..4086555 | - | 1266 | WP_001218329.1 | Prophage integrase IntA ; Integrase | Integrase |
| M5T36_RS19650 (4087020) | 4087020..4087163 | - | 144 | Protein_3843 | hypothetical protein | - |
| M5T36_RS19655 (4087248) | 4087248..4087445 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| M5T36_RS19660 (4087465) | 4087465..4087953 | - | 489 | WP_000761685.1 | DUF5983 family protein | - |
| M5T36_RS19665 (4087950) | 4087950..4088327 | - | 378 | WP_001094443.1 | TA system toxin CbtA family protein | Toxin Detail |
| M5T36_RS19670 (4088417) | 4088417..4088785 | - | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| M5T36_RS19675 (4088865) | 4088865..4089086 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| M5T36_RS19680 (4089173) | 4089173..4089649 | - | 477 | WP_001186165.1 | RadC family protein | - |
| M5T36_RS19685 (4089664) | 4089664..4090149 | - | 486 | WP_000206664.1 | antirestriction protein | - |
| M5T36_RS19690 (4090241) | 4090241..4091059 | - | 819 | WP_001175163.1 | DUF932 domain-containing protein | - |
| M5T36_RS19695 (4091149) | 4091149..4091382 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| M5T36_RS19700 (4091388) | 4091388..4092065 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| M5T36_RS19705 (4092213) | 4092213..4092893 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| M5T36_RS19710 (4093096) | 4093096..4093980 | - | 885 | WP_000010383.1 | 50S ribosome-binding GTPase | - |
| M5T36_RS19715 (4094086) | 4094086..4095048 | + | 963 | WP_000126799.1 | hypothetical protein | - |
| M5T36_RS19720 (4095045) | 4095045..4095899 | - | 855 | WP_259429099.1 | replication regulatory RepB family protein | - |
| M5T36_RS19725 (4097519) | 4097519..4098049 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| M5T36_RS19730 (4098719) | 4098719..4099450 | + | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| M5T36_RS19735 (4099666) | 4099666..4100448 | - | 783 | WP_072133117.1 | IS21 family transposase IS100kyp | Transposase |
| M5T36_RS19740 (4100445) | 4100445..4101467 | - | 1023 | WP_001295213.1 | IS21 family transposase IS100kyp | Transposase |
| M5T36_RS19745 (4101481) | 4101481..4101975 | - | 495 | WP_123906543.1 | phage terminase large subunit family protein | - |
| M5T36_RS19750 (4101920) | 4101920..4102441 | - | 522 | WP_000999908.1 | hypothetical protein | - |
| M5T36_RS19755 (4102606) | 4102606..4103109 | + | 504 | WP_001072164.1 | SLATT domain-containing protein | - |
| M5T36_RS19760 (4103112) | 4103112..4103888 | + | 777 | WP_000218942.1 | nucleotidyltransferase domain-containing protein | - |
| M5T36_RS19765 (4104167) | 4104167..4104841 | - | 675 | WP_000454879.1 | hypothetical protein | - |
| M5T36_RS19770 (4105165) | 4105165..4105968 | + | 804 | WP_001609855.1 | hypothetical protein | - |
| M5T36_RS19775 (4106154) | 4106154..4106705 | + | 552 | WP_000387046.1 | hypothetical protein | - |
| M5T36_RS19780 (4106702) | 4106702..4107403 | + | 702 | WP_001022716.1 | hypothetical protein | - |
| M5T36_RS19785 (4107441) | 4107441..4108262 | + | 822 | WP_000900255.1 | hypothetical protein | - |
| M5T36_RS19790 (4108381) | 4108381..4109124 | + | 744 | WP_001617302.1 | hypothetical protein | - |
| M5T36_RS19800 (4110883) | 4110883..4111484 | + | 602 | Protein_3873 | IS481 family transposase ISKpn28 | Transposase |
| M5T36_RS19805 (4111539) | 4111539..4111688 | + | 150 | Protein_3874 | IS481 family transposase ISKpn28 | Transposase |
| M5T36_RS19810 (4113180) | 4113180..4113317 | + | 138 | WP_001611300.1 | hypothetical protein | - |
| M5T36_RS19815 (4113387) | 4113387..4114595 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| M5T36_RS19820 (4114611) | 4114611..4114730 | - | 120 | Protein_3877 | LysR family transcriptional regulator | - |
| M5T36_RS19825 (4114961) | 4114961..4116166 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| M5T36_RS19830 (4116610) | 4116610..4116930 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| M5T36_RS19835 (4116923) | 4116923..4117309 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| M5T36_RS19840 (4117317) | 4117317..4118003 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| M5T36_RS19845 (4117981) | 4117981..4118604 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| M5T36_RS19850 (4118686) | 4118686..4119891 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| M5T36_RS19855 (4120004) | 4120004..4120597 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| M5T36_RS19860 (4120685) | 4120685..4121101 | + | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| M5T36_RS19865 (4121111) | 4121111..4122319 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| M5T36_RS19870 (4122426) | 4122426..4122902 | + | 477 | Protein_3887 | inovirus Gp2 family protein | - |
| M5T36_RS19875 (4123149) | 4123149..4123724 | + | 576 | WP_000991584.1 | hypothetical protein | - |
| M5T36_RS19880 (4123793) | 4123793..4124029 | + | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| M5T36_RS19885 (4124026) | 4124026..4124184 | + | 159 | WP_000831911.1 | hypothetical protein | - |
| M5T36_RS19890 (4124272) | 4124272..4124820 | + | 549 | WP_001167422.1 | hypothetical protein | - |
| M5T36_RS19895 (4124839) | 4124839..4125183 | - | 345 | WP_000166952.1 | ProQ/FinO family protein | - |
| M5T36_RS19900 (4125180) | 4125180..4125353 | - | 174 | WP_000258195.1 | hypothetical protein | - |
| M5T36_RS19905 (4125816) | 4125816..4126901 | + | 1086 | WP_000179014.1 | DNA sulfur modification protein DndB | - |
| M5T36_RS19910 (4126898) | 4126898..4128532 | + | 1635 | WP_000041168.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| M5T36_RS19915 (4128522) | 4128522..4130522 | + | 2001 | WP_000905895.1 | DNA sulfur modification protein DndD | - |
| M5T36_RS19920 (4130522) | 4130522..4130878 | + | 357 | WP_000937304.1 | DNA sulfur modification protein DndE | - |
| M5T36_RS19925 (4130937) | 4130937..4131692 | - | 756 | WP_071992076.1 | DGQHR domain-containing protein | - |
| M5T36_RS19930 (4131792) | 4131792..4132097 | - | 306 | WP_000071509.1 | DNA sulfur modification protein DndB | - |
| M5T36_RS19935 (4132098) | 4132098..4132616 | - | 519 | WP_001327223.1 | accessory gene regulator B family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|