MGE detailed information
MGE type: Genomic_island MGE length: 14278 bp
Accession: NZ_CP103596 Location: 2332318..2346595 Organism: Escherichia coli strain 4848 Replicon: chromosome
Accession: NZ_CP103596 Location: 2332318..2346595 Organism: Escherichia coli strain 4848 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T19_RS11425 (2332318) | 2332318..2332584 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| M5T19_RS11430 (2332584) | 2332584..2333906 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| M5T19_RS11435 (2334218) | 2334218..2334426 | + | 209 | Protein_2237 | AraC family transcriptional regulator | - |
| M5T19_RS11440 (2334681) | 2334681..2335907 | + | 1227 | Protein_2238 | Outer membrane usher protein FimD | VF |
| M5T19_RS11445 (2335921) | 2335921..2336451 | + | 531 | WP_000876763.1 | Protein FimF | VF |
| M5T19_RS11450 (2336464) | 2336464..2336967 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| M5T19_RS11455 (2337026) | 2337026..2337940 | + | 915 | WP_000520662.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| M5T19_RS11460 (2338274) | 2338274..2340553 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| M5T19_RS11465 (2340801) | 2340801..2340998 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| M5T19_RS11470 (2341073) | 2341073..2341834 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| M5T19_RS11475 (2342236) | 2342236..2343918 | + | 1683 | WP_001295684.1 | sulfatase | - |
| M5T19_RS11480 (2343970) | 2343970..2345127 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| M5T19_RS11485 (2345093) | 2345093..2345215 | - | 123 | WP_120795387.1 | protein YneP | - |
| M5T19_RS11490 (2345418) | 2345418..2345882 | + | 465 | Protein_2248 | ABC transporter ATP-binding protein/permease | - |
| M5T19_RS11500 (2346623) | 2346623..2347879 | + | 1257 | Protein_2250 | ABC transporter ATP-binding protein/permease | - |
| M5T19_RS11505 (2347917) | 2347917..2350289 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.006 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.006 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.006 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.006 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.006 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.006 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.006 |