MGE detailed information
MGE type: IScluster/Tn MGE length: 7397 bp
Accession: NZ_CP103593 Location: 34970..42366 Organism: Escherichia coli O25b:H4-ST131 strain 4224 Replicon: plasmid pMB7542_1
Accession: NZ_CP103593 Location: 34970..42366 Organism: Escherichia coli O25b:H4-ST131 strain 4224 Replicon: plasmid pMB7542_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S53_RS25130 (30180) | 30180..30515 | + | 336 | WP_013023883.1 | hypothetical protein | - |
| M5S53_RS25135 (30428) | 30428..30634 | + | 207 | WP_000547975.1 | hypothetical protein | - |
| M5S53_RS25140 (30660) | 30660..31199 | + | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| M5S53_RS25145 (31262) | 31262..31495 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| M5S53_RS25150 (31561) | 31561..33519 | + | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| M5S53_RS25155 (33574) | 33574..34008 | + | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| M5S53_RS25160 (34005) | 34005..34767 | + | 763 | Protein_43 | plasmid SOS inhibition protein A | - |
| - (34736) | 34736..34922 | + | 187 | NuclAT_0 | - | - |
| - (34736) | 34736..34922 | + | 187 | NuclAT_0 | - | - |
| - (34736) | 34736..34922 | + | 187 | NuclAT_0 | - | - |
| - (34736) | 34736..34922 | + | 187 | NuclAT_0 | - | - |
| M5S53_RS25165 (34970) | 34970..36339 | + | 1370 | WP_085947770.1 | IS3-like element IS150 family transposase | - |
| - (36366) | 36366..36406 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (36366) | 36366..36406 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (36366) | 36366..36406 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (36366) | 36366..36406 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| M5S53_RS25170 (36392) | 36392..36541 | + | 150 | Protein_45 | plasmid maintenance protein Mok | - |
| M5S53_RS25175 (36483) | 36483..36608 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| M5S53_RS25180 (36828) | 36828..37058 | + | 231 | WP_001426396.1 | hypothetical protein | - |
| M5S53_RS25185 (37056) | 37056..37229 | - | 174 | Protein_48 | hypothetical protein | - |
| M5S53_RS25190 (37299) | 37299..37505 | + | 207 | WP_000275859.1 | hypothetical protein | - |
| M5S53_RS25195 (37530) | 37530..37682 | + | 153 | WP_231527929.1 | hypothetical protein | - |
| M5S53_RS25200 (37719) | 37719..38423 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| M5S53_RS25205 (38369) | 38369..39034 | - | 666 | WP_259384720.1 | transglycosylase SLT domain-containing protein | - |
| M5S53_RS25210 (39374) | 39374..39757 | + | 384 | WP_001151566.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| M5S53_RS25215 (39891) | 39891..40568 | + | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| M5S53_RS25220 (40656) | 40656..40883 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| M5S53_RS25225 (40917) | 40917..41279 | + | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| M5S53_RS25230 (41284) | 41284..41595 | + | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| M5S53_RS25235 (41669) | 41669..42366 | + | 698 | WP_223216367.1 | IS1 family transposase | - |
| M5S53_RS25240 (42414) | 42414..42734 | + | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| M5S53_RS25245 (42861) | 42861..43145 | + | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| M5S53_RS25250 (43132) | 43132..43677 | + | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| M5S53_RS25255 (43607) | 43607..43954 | + | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| M5S53_RS25260 (43935) | 43935..44327 | + | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| M5S53_RS25265 (44314) | 44314..45687 | + | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|