MGE detailed information
MGE type: Genomic_island MGE length: 66057 bp
Accession: NZ_CP103592 Location: 802276..868332 Organism: Escherichia coli O25b:H4-ST131 strain 4224 Replicon: chromosome
Accession: NZ_CP103592 Location: 802276..868332 Organism: Escherichia coli O25b:H4-ST131 strain 4224 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S53_RS03895 (798250) | 798250..798786 | + | 537 | WP_000942771.1 | GspM family type II secretion system protein YghD | - |
| M5S53_RS03900 (799844) | 799844..800620 | + | 777 | WP_000124287.1 | ABC transporter permease | - |
| M5S53_RS03905 (800617) | 800617..801291 | + | 675 | WP_000590243.1 | ABC transporter ATP-binding protein | - |
| M5S53_RS03910 (801623) | 801623..801825 | + | 203 | Protein_768 | transposase | - |
| M5S53_RS03915 (802276) | 802276..802992 | + | 717 | WP_000634338.1 | K5 polysaccharide biosynthesis alpha-UDP-GlcNAc glycosyltransferase KfiA | - |
| M5S53_RS03920 (803427) | 803427..805115 | + | 1689 | WP_022645101.1 | hypothetical protein | VF |
| M5S53_RS03925 (805212) | 805212..806246 | - | 1035 | Protein_771 | IS481 family transposase | - |
| M5S53_RS03930 (806407) | 806407..807969 | + | 1563 | WP_001305085.1 | hypothetical protein | VF |
| M5S53_RS03935 (808011) | 808011..809189 | + | 1179 | WP_001305084.1 | UDP-glucose 6-dehydrogenase | VF |
| M5S53_RS03940 (809528) | 809528..810697 | - | 1170 | WP_001161856.1 | hypothetical protein | VF |
| M5S53_RS03945 (810732) | 810732..812759 | - | 2028 | WP_000579513.1 | hypothetical protein | VF |
| M5S53_RS03950 (812756) | 812756..813496 | - | 741 | WP_000030749.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| M5S53_RS03955 (813506) | 813506..815182 | - | 1677 | WP_001305083.1 | Polysialic acid transport protein KpsD | VF |
| M5S53_RS03960 (815206) | 815206..816354 | - | 1149 | WP_000905920.1 | hypothetical protein | VF |
| M5S53_RS03965 (816426) | 816426..817409 | - | 984 | WP_001296394.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| M5S53_RS03970 (818220) | 818220..818390 | - | 171 | Protein_780 | IS110 family transposase ISEc32 | Transposase |
| M5S53_RS03975 (818807) | 818807..819740 | - | 934 | Protein_781 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| M5S53_RS03980 (819733) | 819733..820128 | - | 396 | WP_000208384.1 | DUF6088 family protein | - |
| M5S53_RS03985 (820197) | 820197..821042 | - | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| M5S53_RS03990 (821127) | 821127..821324 | - | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| M5S53_RS03995 (821341) | 821341..821829 | - | 489 | WP_000761699.1 | DUF5983 family protein | - |
| M5S53_RS04000 (821826) | 821826..822203 | - | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| M5S53_RS04005 (822292) | 822292..822660 | - | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| M5S53_RS04010 (822710) | 822710..823354 | - | 645 | WP_000094916.1 | hypothetical protein | - |
| M5S53_RS04015 (823373) | 823373..823594 | - | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| M5S53_RS04020 (823657) | 823657..824133 | - | 477 | WP_001186726.1 | RadC family protein | - |
| M5S53_RS04025 (824149) | 824149..824634 | - | 486 | WP_000849565.1 | antirestriction protein | - |
| M5S53_RS04030 (824689) | 824689..825507 | - | 819 | WP_001234620.1 | DUF932 domain-containing protein | - |
| M5S53_RS04035 (825608) | 825608..825841 | - | 234 | WP_000902034.1 | DUF905 family protein | - |
| M5S53_RS04040 (825920) | 825920..826375 | - | 456 | WP_000581502.1 | IrmA family protein | - |
| M5S53_RS04045 (826451) | 826451..827578 | - | 1128 | Protein_795 | hypothetical protein | - |
| M5S53_RS04050 (827673) | 827673..830795 | - | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| M5S53_RS04055 (831129) | 831129..832001 | - | 873 | WP_001069668.1 | GTPase family protein | - |
| M5S53_RS04060 (833333) | 833333..834823 | + | 1491 | WP_001305029.1 | YfjI family protein | - |
| M5S53_RS04065 (834944) | 834944..835516 | - | 573 | WP_001296389.1 | hypothetical protein | - |
| M5S53_RS04070 (835602) | 835602..835808 | - | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| M5S53_RS04075 (836726) | 836726..836905 | + | 180 | Protein_801 | hemolysin expression modulator Hha | - |
| M5S53_RS04080 (837238) | 837238..837435 | - | 198 | WP_001547002.1 | hypothetical protein | - |
| M5S53_RS04085 (837634) | 837634..838203 | + | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| M5S53_RS04090 (838370) | 838370..838753 | + | 384 | WP_000271011.1 | putative zinc ribbon protein | - |
| M5S53_RS04095 (838750) | 838750..838935 | + | 186 | Protein_805 | zinc-ribbon domain-containing protein | - |
| M5S53_RS04100 (838974) | 838974..840512 | - | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| M5S53_RS04105 (840512) | 840512..841609 | - | 1098 | Protein_807 | IS66 family transposase IS682 | Transposase |
| M5S53_RS04110 (841640) | 841640..841990 | - | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| M5S53_RS04115 (841987) | 841987..842412 | - | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| M5S53_RS04120 (842558) | 842558..842955 | - | 398 | Protein_810 | transposase domain-containing protein | - |
| M5S53_RS04125 (843073) | 843073..843990 | + | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| M5S53_RS04130 (844024) | 844024..844899 | + | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| M5S53_RS04135 (844948) | 844948..846420 | + | 1473 | WP_000376547.1 | MFS transporter | - |
| M5S53_RS04140 (846424) | 846424..847254 | + | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| M5S53_RS04145 (847300) | 847300..848010 | + | 711 | WP_001296386.1 | oligogalacturonate-specific porin KdgM family protein | - |
| M5S53_RS04150 (848023) | 848023..849132 | + | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| M5S53_RS04155 (849194) | 849194..850117 | + | 924 | WP_001030790.1 | alpha/beta hydrolase | - |
| M5S53_RS04160 (850153) | 850153..850887 | - | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| M5S53_RS04165 (850984) | 850984..851973 | + | 990 | WP_000990138.1 | sialate O-acetylesterase | - |
| M5S53_RS04170 (852125) | 852125..853353 | + | 1229 | WP_096928816.1 | IS3 family transposase IS2 | Transposase |
| M5S53_RS04175 (853853) | 853853..855943 | + | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| M5S53_RS04180 (856161) | 856161..856320 | - | 160 | Protein_822 | transposase domain-containing protein | - |
| M5S53_RS04185 (856805) | 856805..857047 | + | 243 | WP_001296383.1 | hypothetical protein | - |
| M5S53_RS04190 (857338) | 857338..857697 | + | 360 | WP_001296382.1 | hypothetical protein | - |
| M5S53_RS04195 (857701) | 857701..857916 | + | 216 | WP_000266542.1 | hypothetical protein | - |
| M5S53_RS04200 (858494) | 858494..858816 | - | 323 | Protein_826 | transposase | - |
| M5S53_RS04205 (858836) | 858836..859345 | + | 510 | Protein_827 | L-lactate permease | - |
| M5S53_RS04210 (859379) | 859379..860911 | - | 1533 | Protein_828 | IS3 family transposase | - |
| M5S53_RS04215 (861327) | 861327..861776 | - | 450 | WP_225469291.1 | hypothetical protein | - |
| M5S53_RS04220 (861794) | 861794..862684 | - | 891 | Protein_830 | IS3 family transposase ISSd1 | Transposase |
| M5S53_RS04225 (862697) | 862697..863848 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| M5S53_RS04230 (863845) | 863845..863931 | - | 87 | Protein_832 | IS3 family transposase ISSfl10 | Transposase |
| M5S53_RS04235 (863913) | 863913..864173 | - | 261 | Protein_833 | IS3 family transposase ISSfl10 | Transposase |
| M5S53_RS04240 (864445) | 864445..868332 | - | 3888 | WP_001034083.1 | Serine protease sat autotransporter | VF |
| M5S53_RS04245 (868582) | 868582..868725 | + | 144 | WP_011076574.1 | hypothetical protein | - |
| M5S53_RS04250 (869276) | 869276..871477 | - | 2202 | WP_000973516.1 | ferric aerobactin receptor IutA | - |
| M5S53_RS04255 (871503) | 871503..872836 | - | 1334 | Protein_837 | NADPH-dependent L-lysine N(6)-monooxygenase IucD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|