MGE detailed information
MGE type: Genomic_island MGE length: 24460 bp
Accession: NZ_CP103592 Location: 4547488..4571947 Organism: Escherichia coli O25b:H4-ST131 strain 4224 Replicon: chromosome
Accession: NZ_CP103592 Location: 4547488..4571947 Organism: Escherichia coli O25b:H4-ST131 strain 4224 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S53_RS22460 (4543584) | 4543584..4543922 | + | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| M5S53_RS22465 (4543898) | 4543898..4545595 | + | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| M5S53_RS22470 (4545632) | 4545632..4546207 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| M5S53_RS22480 (4546587) | 4546587..4546746 | + | 160 | Protein_4410 | integrase | - |
| M5S53_RS22485 (4547006) | 4547006..4548543 | + | 1538 | Protein_4411 | lysine decarboxylation/transport transcriptional activator CadC | - |
| M5S53_RS22490 (4548909) | 4548909..4550243 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| M5S53_RS22495 (4550323) | 4550323..4552470 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| M5S53_RS22500 (4552529) | 4552529..4553986 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| M5S53_RS22505 (4554223) | 4554223..4555740 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| M5S53_RS22510 (4555859) | 4555859..4556032 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| M5S53_RS22515 (4556060) | 4556060..4556356 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| M5S53_RS22520 (4556584) | 4556584..4556856 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| M5S53_RS22525 (4557070) | 4557070..4560999 | - | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| M5S53_RS22530 (4562155) | 4562155..4562985 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| M5S53_RS22535 (4563883) | 4563883..4567695 | - | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| M5S53_RS22540 (4568096) | 4568096..4568620 | + | 525 | WP_000491818.1 | hypothetical protein | - |
| M5S53_RS22545 (4568685) | 4568685..4569377 | + | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| M5S53_RS22550 (4569410) | 4569410..4571947 | + | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| M5S53_RS22555 (4572057) | 4572057..4572329 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| M5S53_RS22560 (4572341) | 4572341..4572571 | - | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| M5S53_RS22565 (4572752) | 4572752..4574383 | + | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| M5S53_RS22570 (4574380) | 4574380..4575099 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|